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OM135992.1__UKM96611.1__X__00213
Bact-VirOM135992.1__UKM96611.1__X__00213
Identity
- Accession:
- OM135992 ↗
- Kingdom:
- phage
Quality
55.0
mean pLDDT
Taxonomy
TaxID: 2914025
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 109-173
D2
medium
residues 236-293
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dkxA02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.79 | 69.0 | 6.25e-01 | 100.0% | 83.7% |
| 4al0A00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.77 | 68.0 | 5.06e-01 | 100.0% | 52.7% |
| 1u8vB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.77 | 69.0 | 4.62e-01 | 100.0% | 69.0% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.76 | 66.0 | 5.55e-01 | 100.0% | 83.3% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.75 | 63.0 | 5.10e-01 | 93.1% | 72.5% |
| 1lq7A00 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.74 | 63.0 | 6.05e-01 | 98.3% | 97.0% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.74 | 65.0 | 4.33e-01 | 100.0% | 61.8% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.73 | 64.0 | 5.85e-01 | 100.0% | 84.6% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.72 | 60.0 | 5.56e-01 | 94.8% | 85.3% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.72 | 61.0 | 4.41e-01 | 94.8% | 49.4% |
| 4lqqB00 | 1.20.140.30 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › MOB kinase activator | 0.71 | 60.0 | 4.59e-01 | 100.0% | 69.9% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.70 | 61.0 | 4.86e-01 | 100.0% | 83.3% |
| 6h5hA00 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.69 | 54.0 | 5.10e-01 | 87.9% | 85.9% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.69 | 58.0 | 4.67e-01 | 100.0% | 89.4% |
| 2clbA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 58.0 | 4.22e-01 | 94.8% | 83.6% |
| 4fqnC00 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.67 | 55.0 | 4.89e-01 | 91.4% | 71.8% |
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.67 | 59.0 | 4.28e-01 | 100.0% | 82.6% |
| 3zssA02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 57.0 | 5.21e-01 | 100.0% | 84.8% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.66 | 54.0 | 5.30e-01 | 98.3% | 95.5% |
| 2lseA00 | 1.20.120.1360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 57.0 | 4.81e-01 | 100.0% | 64.4% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 56.0 | 5.13e-01 | 100.0% | 96.2% |
| 3hx0K01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.65 | 55.0 | 4.96e-01 | 98.3% | 91.6% |
| 3rlfF01 | 1.20.58.370 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like | 0.65 | 49.0 | 4.34e-01 | 82.8% | 73.3% |
| 2hz8A00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.64 | 53.0 | 4.41e-01 | 100.0% | 82.6% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 52.0 | 3.78e-01 | 96.6% | 80.2% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.62 | 51.0 | 4.66e-01 | 96.6% | 91.5% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 51.0 | 3.91e-01 | 94.8% | 92.4% |
| 2es9A00 | 1.20.1290.30 | Mainly Alpha › Up-down Bundle › AhpD-like › | 0.62 | 48.0 | 4.06e-01 | 86.2% | 51.0% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.60 | 49.0 | 4.61e-01 | 96.6% | 88.2% |
| 6q9jB02 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.60 | 49.0 | 4.46e-01 | 100.0% | 76.1% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.60 | 50.0 | 4.47e-01 | 98.3% | 81.6% |
| 2q14B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.59 | 51.0 | 3.45e-01 | 100.0% | 56.7% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 49.0 | 4.41e-01 | 100.0% | 80.0% |
| 3hjlA02 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.57 | 48.0 | 4.07e-01 | 100.0% | 81.1% |
| 3t9oB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.57 | 46.0 | 3.83e-01 | 98.3% | 88.3% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 41.0 | 3.66e-01 | 79.3% | 86.9% |
| 4akgA14 | 1.20.1280.160 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.53 | 47.0 | 3.87e-01 | 100.0% | 71.6% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4360723 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.85 | 77.0 | 6.61e-01 | 100.0% | 77.8% |
| 4142527 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.85 | 77.0 | 6.07e-01 | 100.0% | 60.9% |
| 4181278 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.84 | 74.0 | 6.76e-01 | 96.6% | 88.0% |
| 3420431 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.83 | 72.0 | 6.35e-01 | 96.6% | 76.5% |
| 4049085 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.82 | 73.0 | 6.01e-01 | 100.0% | 66.7% |
| 5071060 | 632.15.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 | 0.82 | 72.0 | 6.08e-01 | 98.3% | 73.7% |
| 3662390 | 632.15.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › GAUT_1 | 0.82 | 74.0 | 6.20e-01 | 100.0% | 80.0% |
| 4601603 | 632.15.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 | 0.81 | 72.0 | 6.43e-01 | 98.3% | 83.7% |
| 4597667 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.81 | 73.0 | 5.51e-01 | 100.0% | 52.6% |
| 4093179 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.81 | 71.0 | 6.38e-01 | 98.3% | 83.7% |
| 4655075 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.80 | 71.0 | 6.14e-01 | 100.0% | 77.8% |
| 4582075 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.80 | 71.0 | 6.11e-01 | 100.0% | 78.9% |
| 3389454 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.78 | 66.0 | 5.17e-01 | 93.1% | 73.3% |
| 4886450 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.77 | 69.0 | 6.20e-01 | 100.0% | 83.7% |
| 3389507 | 3817.1.1.1 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 | 0.77 | 65.0 | 5.08e-01 | 93.1% | 65.8% |
| 3782374 | 3817.1.1.1 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 | 0.76 | 65.0 | 5.16e-01 | 93.1% | 66.1% |
| 3645555 | 3817.1.1.1 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 | 0.75 | 64.0 | 4.96e-01 | 93.1% | 58.5% |
| 4267913 | 219.1.1.20 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 | 0.74 | 63.0 | 4.00e-01 | 98.3% | 99.0% |
| 3743716 | 5001.1.1.55 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Git3 | 0.74 | 50.0 | 3.10e-01 | 70.7% | 27.1% |
| 5022013 | 632.7.1.61 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › BREX_BrxC_helical | 0.73 | 64.0 | 5.10e-01 | 100.0% | 78.3% |
| 3637398 | 5001.1.1.85 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Fung_rhodopsin | 0.73 | 64.0 | 4.06e-01 | 100.0% | 35.6% |
| 184601 | 633.2.1.1 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein › EntA_Immun | 0.73 | 64.0 | 5.85e-01 | 100.0% | 84.6% |
| 5046473 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.72 | 63.0 | 5.52e-01 | 100.0% | 66.7% |
| 3334253 | 108.1.1.111 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › DUF7952 | 0.72 | 64.0 | 5.65e-01 | 100.0% | 71.8% |
| 4981747 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.71 | 60.0 | 5.81e-01 | 98.3% | 95.4% |
| 5069662 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.70 | 56.0 | 5.37e-01 | 96.6% | 75.7% |
| 5016115 | 632.11.1.17 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF1722 | 0.70 | 59.0 | 5.63e-01 | 100.0% | 85.7% |
| 3790887 | 174.1.1.32 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Transmemb_17 | 0.70 | 62.0 | 4.64e-01 | 100.0% | 61.4% |
| 3645559 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.70 | 48.0 | 4.26e-01 | 74.1% | 56.7% |
| 4200315 | 604.6.1.59 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › PigN | 0.70 | 60.0 | 4.53e-01 | 94.8% | 65.9% |
| 3408432 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.69 | 60.0 | 4.48e-01 | 96.6% | 62.8% |
| 4959130 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.69 | 57.0 | 5.45e-01 | 96.6% | 95.7% |
| 3701111 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.68 | 56.0 | 4.81e-01 | 96.6% | 66.0% |
| 3447211 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.68 | 57.0 | 4.01e-01 | 100.0% | 65.4% |
| 5070466 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.68 | 54.0 | 4.69e-01 | 96.6% | 55.8% |
| 5060252 | 632.23.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Helical linker domain in nicking endonuclease N.BspD6I › Helical linker domain in nicking endonuclease N.BspD6I | 0.68 | 57.0 | 5.15e-01 | 98.3% | 80.0% |
| 3633369 | 611.9.1.6 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Ran-binding | 0.67 | 57.0 | 4.30e-01 | 100.0% | 60.6% |
| 5053742 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.67 | 55.0 | 4.54e-01 | 100.0% | 67.5% |
| 1872111 | 11.1.1.154 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgE_dom_N_S | 0.66 | 55.0 | 3.94e-01 | 100.0% | 38.5% |
| 5036028 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.65 | 55.0 | 4.15e-01 | 96.6% | 62.8% |
| 4965834 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.63 | 52.0 | 4.69e-01 | 98.3% | 96.5% |
| 3212941 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.63 | 52.0 | 3.86e-01 | 94.8% | 75.5% |
| 4967956 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.62 | 42.0 | 3.41e-01 | 70.7% | 76.4% |
| 3656890 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 52.0 | 4.52e-01 | 100.0% | 84.2% |
| 3703885 | 5059.1.1.34 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA, Nuc_sug_transp | 0.61 | 48.0 | 3.08e-01 | 87.9% | 92.9% |
| 3602612 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.60 | 49.0 | 4.73e-01 | 100.0% | 91.4% |
| 3968629 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 47.0 | 3.08e-01 | 94.8% | 53.2% |
| 3743739 | 2485.1.1.49 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_12 | 0.54 | 42.0 | 3.08e-01 | 87.9% | 36.0% |
| 3393571 | 5059.1.1.4 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Nuc_sug_transp | 0.54 | 43.0 | 2.75e-01 | 91.4% | 67.3% |