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OM158235.1__UKL14749.1__C121_16__00016
Bact-VirOM158235.1__UKL14749.1__C121_16__00016
Identity
- Accession:
- OM158235 ↗
- Kingdom:
- phage
Quality
72.7
mean pLDDT
Taxonomy
TaxID: 2914029
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-55
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.90 | 82.0 | 5.87e-01 | 100.0% | 73.6% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.89 | 81.0 | 7.03e-01 | 100.0% | 92.3% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 71.0 | 7.07e-01 | 90.6% | 90.7% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.82 | 73.0 | 6.22e-01 | 100.0% | 61.6% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 60.0 | 6.17e-01 | 100.0% | 84.3% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.80 | 65.0 | 5.82e-01 | 100.0% | 64.0% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 69.0 | 6.62e-01 | 98.1% | 98.4% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 68.0 | 4.96e-01 | 100.0% | 41.5% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 63.0 | 6.03e-01 | 96.2% | 77.0% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.78 | 67.0 | 6.07e-01 | 100.0% | 77.0% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 65.0 | 5.79e-01 | 100.0% | 65.4% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 67.0 | 6.31e-01 | 100.0% | 82.8% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.76 | 60.0 | 5.41e-01 | 86.8% | 66.2% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.76 | 66.0 | 5.94e-01 | 100.0% | 71.6% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.75 | 66.0 | 5.79e-01 | 98.1% | 67.1% |
| 1jadA00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.75 | 62.0 | 4.07e-01 | 96.2% | 40.1% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.75 | 64.0 | 4.77e-01 | 100.0% | 37.1% |
| 2mpnA00 | 6.10.140.1340 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 61.0 | 5.73e-01 | 96.2% | 76.5% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 55.0 | 4.46e-01 | 84.9% | 43.8% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.73 | 62.0 | 4.98e-01 | 100.0% | 47.7% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 63.0 | 5.64e-01 | 100.0% | 93.4% |
| 2wyhB04 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.71 | 60.0 | 4.93e-01 | 98.1% | 57.4% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.71 | 59.0 | 5.82e-01 | 100.0% | 86.2% |
| 2rt6A00 | 1.20.1270.340 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.71 | 59.0 | 4.96e-01 | 98.1% | 79.6% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 56.0 | 5.60e-01 | 94.3% | 85.7% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.71 | 60.0 | 4.27e-01 | 100.0% | 40.0% |
| 2v40A02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.69 | 50.0 | 4.18e-01 | 79.2% | 45.5% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 57.0 | 5.36e-01 | 100.0% | 73.8% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.69 | 54.0 | 4.42e-01 | 94.3% | 44.8% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 57.0 | 5.65e-01 | 100.0% | 93.0% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 53.0 | 5.47e-01 | 94.3% | 100.0% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.66 | 56.0 | 5.13e-01 | 98.1% | 73.2% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 54.0 | 4.90e-01 | 100.0% | 68.5% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 51.0 | 5.07e-01 | 96.2% | 87.9% |
| 3pmiA02 | 6.10.300.20 | Special › Helix non-globular › cAMP-dependent Protein Kinase, Chain A › | 0.64 | 52.0 | 5.44e-01 | 90.6% | 100.0% |
| 3q18A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 54.0 | 4.26e-01 | 100.0% | 48.3% |
| 2qkdA02 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.63 | 54.0 | 4.03e-01 | 100.0% | 46.4% |
| 2jx4A01 | 6.10.140.460 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 45.0 | 4.66e-01 | 88.7% | 87.5% |
| 1rsoB00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.60 | 48.0 | 4.74e-01 | 92.5% | 85.7% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 50.0 | 4.35e-01 | 94.3% | 63.1% |
| 3bemB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.59 | 53.0 | 3.49e-01 | 100.0% | 52.2% |
| 4od8D00 | 6.10.140.1880 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 44.0 | 4.50e-01 | 88.7% | 84.3% |
| 2gf2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 46.0 | 3.57e-01 | 98.1% | 64.9% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3172376 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.85 | 71.0 | 4.89e-01 | 94.3% | 28.8% |
| 4132487 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.81 | 61.0 | 5.65e-01 | 100.0% | 64.6% |
| 3930934 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.81 | 70.0 | 4.39e-01 | 100.0% | 18.9% |
| 3762669 | 4970.1.1.16 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › TMEM218_N | 0.80 | 64.0 | 5.16e-01 | 100.0% | 45.7% |
| 3570117 | 375.6.1.2 ↗ | few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › PF31275 | 0.80 | 62.0 | 5.98e-01 | 100.0% | 76.7% |
| 4276514 | 3826.1.1.88 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › CC_BshC | 0.78 | 66.0 | 6.09e-01 | 100.0% | 74.3% |
| 3723174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 66.0 | 5.90e-01 | 100.0% | 66.7% |
| 3641527 | 192.8.1.353 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med10 | 0.76 | 64.0 | 5.62e-01 | 96.2% | 67.5% |
| 3563272 | 375.1.1.202 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tmemb_55A | 0.76 | 64.0 | 6.38e-01 | 100.0% | 90.9% |
| 3933048 | 4992.1.1.12 ↗ | extended segments › RelB-like › RelB-like › RelB-like › LIN9_C | 0.75 | 66.0 | 5.37e-01 | 100.0% | 68.0% |
| 3787131 | 524.1.1.8 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC, RabGap-TBC_2 | 0.75 | 56.0 | 3.81e-01 | 81.1% | 23.2% |
| 3564234 | 4970.1.1.16 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › TMEM218_N | 0.75 | 61.0 | 6.11e-01 | 100.0% | 92.7% |
| 3840952 | 601.19.1.39 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C | 0.74 | 65.0 | 5.86e-01 | 100.0% | 76.0% |
| 4239367 | 4274.1.1.3 ↗ | extended segments › Transmembrane helices in MalF N-terminal region › Transmembrane helices in MalF N-terminal region › Transmembrane helices in MalF N-terminal region › TMEM218_N | 0.73 | 60.0 | 5.95e-01 | 100.0% | 92.7% |
| 3344802 | 6158.1.1.0 ↗ | alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region | 0.73 | 60.0 | 5.71e-01 | 94.3% | 98.5% |
| 3265542 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 53.0 | 5.65e-01 | 86.8% | 100.0% |
| 3904047 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.73 | 63.0 | 4.32e-01 | 98.1% | 30.3% |
| 5006936 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.71 | 62.0 | 5.83e-01 | 100.0% | 81.5% |
| 3754639 | 150.5.1.106 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C | 0.71 | 63.0 | 5.40e-01 | 100.0% | 67.1% |
| 3944240 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.70 | 62.0 | 5.20e-01 | 100.0% | 88.9% |
| 4328747 | 148.1.3.209 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › GrpE | 0.70 | 57.0 | 4.53e-01 | 94.3% | 78.9% |
| 2485668 | 7025.1.1.2 ↗ | alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C | 0.69 | 59.0 | 5.13e-01 | 100.0% | 84.5% |
| 4507542 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.68 | 60.0 | 5.06e-01 | 100.0% | 90.0% |
| 4819006 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.68 | 57.0 | 3.68e-01 | 100.0% | 19.8% |
| 3589830 | 5043.2.1.8 ↗ | extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain › DUF5592 | 0.66 | 54.0 | 4.94e-01 | 92.5% | 75.7% |
| 3794577 | 3331.1.1.14 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › CHDCT2 | 0.65 | 54.0 | 4.72e-01 | 98.1% | 63.5% |
| 3260684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.61 | 51.0 | 5.09e-01 | 96.2% | 92.7% |