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OM158235.1__UKL14781.1__C121_48__00048

Bact-Vir

OM158235.1__UKL14781.1__C121_48__00048

Identity

Accession:
OM158235 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Cavevirus› Stenotrophomonas_phage_C121

TaxID: 2914029

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-71
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 57.0 4.78e-01 89.7% 96.1%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 52.0 4.33e-01 89.7% 88.8%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 59.0 5.69e-01 100.0% 89.4%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 59.0 5.75e-01 100.0% 93.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 56.0 5.52e-01 100.0% 93.7%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 57.0 5.61e-01 100.0% 96.8%
2bujB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 49.0 4.14e-01 84.5% 88.3%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 56.0 5.19e-01 100.0% 97.2%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 54.0 5.00e-01 98.3% 93.1%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 52.0 4.97e-01 98.3% 85.7%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 4.99e-01 100.0% 86.2%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 52.0 4.25e-01 98.3% 59.3%
4ad9A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.59 47.0 3.18e-01 86.2% 30.4%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 52.0 4.94e-01 100.0% 87.0%
3wx7A02 2.10.10.90 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.58 44.0 3.72e-01 81.0% 55.8%
6p3qA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 49.0 3.68e-01 100.0% 79.7%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 51.0 4.68e-01 100.0% 89.3%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 50.0 3.76e-01 100.0% 94.6%
2dfkC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.03e-01 77.6% 99.3%
6u10A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 42.0 2.72e-01 84.5% 29.4%
5wcmA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 43.0 2.78e-01 86.2% 30.4%
4h03A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.54 38.0 2.77e-01 77.6% 78.7%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.53 38.0 2.76e-01 81.0% 77.8%
4by6C00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.53 37.0 2.73e-01 91.4% 25.6%
3rfoA02 3.10.25.10 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain 0.51 44.0 3.65e-01 98.3% 93.3%
4xsgB00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.51 36.0 2.63e-01 77.6% 79.0%
1jdpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 37.0 2.64e-01 79.3% 35.8%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 63.0 6.50e-01 98.3% 89.1%
3306779 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 61.0 5.85e-01 100.0% 90.8%
4158157 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 61.0 5.84e-01 100.0% 90.8%
4028885 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 60.0 5.80e-01 100.0% 90.8%
4101580 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 61.0 5.84e-01 100.0% 90.8%
4041586 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 60.0 5.75e-01 100.0% 90.8%
142633 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 59.0 5.69e-01 100.0% 89.4%
4292289 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 60.0 5.77e-01 100.0% 92.3%
4086925 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 59.0 5.73e-01 100.0% 89.2%
4077367 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 59.0 5.71e-01 100.0% 93.8%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 60.0 5.80e-01 100.0% 90.8%
3590827 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 59.0 5.70e-01 100.0% 90.8%
4037383 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 60.0 5.79e-01 100.0% 90.8%
4524363 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 59.0 5.69e-01 100.0% 90.8%
4051625 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 60.0 5.75e-01 100.0% 90.8%
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 60.0 5.74e-01 100.0% 93.8%
4201878 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 59.0 5.71e-01 100.0% 90.8%
4213539 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 59.0 5.71e-01 100.0% 90.8%
4646632 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 59.0 5.71e-01 100.0% 92.3%
4419948 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 59.0 5.72e-01 100.0% 90.8%
3608236 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 59.0 5.69e-01 100.0% 90.8%
4146937 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 59.0 5.65e-01 100.0% 90.8%
3599172 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 58.0 5.62e-01 100.0% 90.8%
4446791 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 58.0 5.60e-01 100.0% 92.3%
5079843 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 56.0 5.41e-01 98.3% 95.4%
3842362 1.1.5.76 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.64 57.0 4.80e-01 100.0% 87.4%
4284764 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 58.0 5.61e-01 100.0% 90.8%
3950208 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 58.0 5.62e-01 100.0% 92.3%
3268856 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.62 55.0 3.37e-01 94.8% 29.8%
2138090 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 55.0 5.33e-01 100.0% 92.3%
3485387 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.01e-01 98.3% 94.7%
3240933 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 55.0 3.35e-01 98.3% 23.7%
3938484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 55.0 4.33e-01 100.0% 67.5%
3555838 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 54.0 4.64e-01 98.3% 82.2%
3935325 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.60 53.0 3.27e-01 96.6% 27.7%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.60 53.0 5.04e-01 100.0% 85.7%
3170251 4.1.1.170 ↗ beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.59 53.0 3.98e-01 100.0% 70.0%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 53.0 4.98e-01 100.0% 87.1%
4038269 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 51.0 4.98e-01 100.0% 92.3%
4863266 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 51.0 4.92e-01 100.0% 86.2%
4030398 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 51.0 4.89e-01 94.8% 100.0%
3483489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 52.0 4.82e-01 100.0% 80.0%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 52.0 4.71e-01 100.0% 75.0%
4345080 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.57 49.0 4.75e-01 100.0% 90.8%
5029394 209.1.1.0 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.57 48.0 3.33e-01 100.0% 83.3%
3164281 5069.1.1.92 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › CcmF_C 0.56 48.0 4.03e-01 96.6% 94.0%
4031443 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.56 49.0 3.14e-01 100.0% 84.1%
3961706 4.1.1.161 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4178 0.55 46.0 4.45e-01 93.1% 87.7%
3264469 4.1.1.309 ↗ beta barrels › SH3 › SH3 › SH3 › MRP-S34 0.53 44.0 3.99e-01 100.0% 91.8%
5032255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 4.14e-01 94.8% 90.0%
4963049 4.1.1.486 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7098 0.52 45.0 4.08e-01 100.0% 92.5%
4419304 11.4.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › DUF4352 0.52 40.0 2.97e-01 91.4% 91.9%
3875127 270.1.1.2 ↗ beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.52 39.0 3.23e-01 84.5% 81.8%
3802388 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.51 38.0 3.39e-01 79.3% 59.0%
5046887 247.1.1.12 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 0.51 39.0 2.75e-01 86.2% 31.2%
5057186 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 45.0 3.90e-01 100.0% 93.3%
4561631 270.1.1.2 ↗ beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.51 44.0 3.68e-01 100.0% 93.3%
3846093 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.50 40.0 2.74e-01 94.8% 93.6%
3401459 270.1.1.2 ↗ beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.50 43.0 3.54e-01 98.3% 92.7%
4611214 270.1.1.2 ↗ beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.50 43.0 3.57e-01 100.0% 92.7%
3297966 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.50 41.0 3.41e-01 100.0% 80.0%