Back to structures

OM158235.1__UKL14783.1__C121_50__00050

Bact-Vir

OM158235.1__UKL14783.1__C121_50__00050

Identity

Accession:
OM158235 ↗
Kingdom:
phage

Quality

88.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-132
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ti2A01 2.20.25.340 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.63 22.0 3.01e-01 72.3% 56.1%
5a2fA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 4.04e-01 88.5% 87.7%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.53 37.0 3.68e-01 96.2% 67.9%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 25.0 3.20e-01 74.6% 80.3%
3omzA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.93e-01 88.5% 88.3%
4hrzB00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 4.02e-01 94.6% 84.6%
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.50 31.0 3.64e-01 93.1% 91.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3613468 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 29.0 3.92e-01 75.4% 84.6%
2526324 7086.1.1.0 0.56 38.0 4.34e-01 70.0% 97.9%
3568964 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.56 36.0 4.23e-01 87.7% 93.3%
3615641 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 33.0 3.90e-01 83.8% 88.2%
3709083 206.1.3.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF7920 0.56 37.0 2.70e-01 84.6% 25.2%
3661102 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.55 23.0 3.33e-01 74.6% 89.1%
3494433 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 32.0 3.33e-01 90.0% 59.7%
3963078 283.1.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.54 33.0 3.90e-01 93.8% 91.8%
4363296 330.11.1.1 a+b two layers › dsRBD-like › Anti-lipopolysaccharide factor (ALF) › Anti-lipopolysaccharide factor (ALF) › Anti-LPS-SCYG 0.53 29.0 3.23e-01 86.9% 66.0%
4013354 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 37.0 2.86e-01 73.8% 40.3%
3980078 274.1.1.24 a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSppdC 0.51 26.0 3.31e-01 92.3% 85.7%
None 0.51 42.0 2.63e-01 90.0% 72.6%
5041343 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 27.0 3.45e-01 73.8% 89.3%
5002676 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.50 33.0 3.48e-01 89.2% 73.9%