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OM158235.1__UKL14798.1__C121_65__00065

Bact-Vir

OM158235.1__UKL14798.1__C121_65__00065

Identity

Accession:
OM158235 ↗
Kingdom:
phage

Quality

68.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Cavevirus› Stenotrophomonas_phage_C121

TaxID: 2914029

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-96
PDB
Domain cluster: rep: MT310865.1__QJD50929.1__SEA_BMOC_220__00179__D6-79
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.73 42.0 5.24e-01 82.4% 98.1%
5fljA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 34.0 2.72e-01 82.4% 23.1%
5jm6A02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.67 53.0 4.57e-01 85.7% 76.9%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 34.0 3.06e-01 82.4% 36.1%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.66 44.0 4.13e-01 92.3% 55.9%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.66 37.0 3.39e-01 85.7% 41.5%
4dyoA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.65 51.0 4.51e-01 85.7% 77.0%
4yrdA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 35.0 3.17e-01 83.5% 38.7%
3q8pB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.65 47.0 4.45e-01 83.5% 63.9%
1blwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 39.0 3.84e-01 87.9% 53.9%
3r8qA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 37.0 3.69e-01 92.3% 54.3%
3qt2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 38.0 3.74e-01 87.9% 54.1%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 42.0 4.08e-01 89.0% 59.4%
1owwA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 36.0 3.66e-01 92.3% 53.8%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 36.0 3.78e-01 89.0% 62.5%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 41.0 3.87e-01 86.8% 55.6%
4hscX04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.62 41.0 3.90e-01 91.2% 55.5%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 32.0 2.56e-01 79.1% 23.9%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 32.0 3.32e-01 91.2% 50.0%
5utkA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 35.0 3.69e-01 84.6% 60.2%
1hq6B00 3.50.20.10 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B 0.61 51.0 3.84e-01 92.3% 37.7%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 31.0 2.81e-01 82.4% 35.8%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.61 35.0 3.97e-01 92.3% 77.3%
4nn5C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 36.0 3.52e-01 89.0% 52.5%
7y8sB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 35.0 3.60e-01 82.4% 58.6%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.59 42.0 3.78e-01 91.2% 51.9%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.58 36.0 3.43e-01 83.5% 51.9%
6brbD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 33.0 3.42e-01 86.8% 58.6%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.57 48.0 3.98e-01 93.4% 84.6%
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.57 44.0 3.49e-01 84.6% 63.7%
2dulA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 42.0 2.92e-01 80.2% 27.9%
4ksnA00 6.20.250.80 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.55 37.0 4.26e-01 82.4% 96.9%
1cfbA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 35.0 3.35e-01 87.9% 54.7%
1c0pA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.54 44.0 3.67e-01 89.0% 59.5%
3fmgA02 2.60.120.800 Mainly Beta › Sandwich › Jelly Rolls › Rotavirus outer-layer protein VP7, domain 2 0.54 33.0 3.43e-01 90.1% 64.4%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.85e-01 93.4% 71.7%
4xurA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 42.0 3.51e-01 85.7% 64.0%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 41.0 2.90e-01 83.5% 85.3%
1c77B00 3.10.20.130 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 43.0 3.95e-01 96.7% 78.9%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.51 26.0 2.88e-01 75.8% 56.1%
4qpwA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 39.0 3.40e-01 84.6% 54.2%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5045949 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 44.0 4.22e-01 89.0% 58.1%
4304537 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.66 56.0 4.50e-01 92.3% 100.0%
3605972 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 40.0 3.77e-01 86.8% 50.0%
3706841 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 44.0 4.21e-01 91.2% 60.0%
5034974 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 37.0 4.11e-01 84.6% 74.3%
3593239 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 43.0 3.80e-01 90.1% 47.9%
3185133 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.61 47.0 4.28e-01 83.5% 84.0%
3027185 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 36.0 3.57e-01 82.4% 54.6%
3231372 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.60 41.0 3.73e-01 91.2% 50.0%
3367533 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.60 32.0 2.49e-01 80.2% 22.5%
1108811 11.15.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C 0.58 39.0 3.72e-01 93.4% 57.8%
3235066 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.57 43.0 3.85e-01 91.2% 54.8%
3165307 5084.5.4.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.55 45.0 2.97e-01 92.3% 86.2%
3442168 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.55 41.0 3.68e-01 90.1% 54.3%
3716614 11.1.1.67 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.54 38.0 3.51e-01 89.0% 54.4%
4335827 11.1.1.612 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF5443 0.54 44.0 3.85e-01 91.2% 57.9%
3898147 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.53 41.0 3.52e-01 84.6% 91.6%
3495245 3369.1.1.0 ↗ beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 0.52 42.0 3.37e-01 92.3% 93.0%
3503237 11.1.1.961 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28985 0.51 39.0 3.32e-01 91.2% 46.1%
3508657 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 43.0 3.43e-01 98.9% 99.0%
3412206 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 39.0 3.33e-01 84.6% 90.6%
3397143 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 42.0 3.57e-01 95.6% 99.4%
3742696 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 39.0 3.24e-01 85.7% 86.9%
3205532 4004.1.1.0 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like 0.50 42.0 3.06e-01 90.1% 46.4%