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OM203159.1__UJD20971.1__SEA_HARRYHOUDINI_43__00042
Bact-VirOM203159.1__UJD20971.1__SEA_HARRYHOUDINI_43__00042
Identity
- Accession:
- OM203159 ↗
- Kingdom:
- phage
Quality
72.1
mean pLDDT
Taxonomy
TaxID: 2910958
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-86
Domain cluster:
rep: OR159677.1__WKW87356.1__SEA_NEBULOSUS_43__00040__D6-76
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udcA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 49.0 | 4.86e-01 | 100.0% | 71.6% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.67 | 45.0 | 4.74e-01 | 98.8% | 77.0% |
| 3gk6A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.67 | 43.0 | 3.55e-01 | 100.0% | 35.9% |
| 6urtA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 47.0 | 4.69e-01 | 100.0% | 70.5% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.66 | 48.0 | 4.42e-01 | 100.0% | 58.3% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.66 | 40.0 | 4.05e-01 | 75.9% | 61.7% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 42.0 | 3.73e-01 | 100.0% | 46.7% |
| 3e05B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 44.0 | 3.31e-01 | 98.8% | 31.2% |
| 2qndA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 44.0 | 4.55e-01 | 97.6% | 77.5% |
| 2gysA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 44.0 | 4.26e-01 | 100.0% | 65.3% |
| 6efyA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 40.0 | 3.84e-01 | 100.0% | 57.1% |
| 1dt4A00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 43.0 | 4.56e-01 | 98.8% | 82.2% |
| 2anrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 43.0 | 4.39e-01 | 98.8% | 75.0% |
| 1el6A02 | 2.20.20.20 | Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain | 0.62 | 35.0 | 4.11e-01 | 100.0% | 93.6% |
| 1we8A01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 41.0 | 4.18e-01 | 98.8% | 70.2% |
| 2axyA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 40.0 | 4.24e-01 | 100.0% | 77.8% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 42.0 | 4.31e-01 | 100.0% | 74.7% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 42.0 | 4.14e-01 | 100.0% | 67.4% |
| 6zzmA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.60 | 52.0 | 3.87e-01 | 100.0% | 79.4% |
| 3maeA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.58 | 51.0 | 3.76e-01 | 100.0% | 74.8% |
| 6h05A00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.58 | 51.0 | 3.71e-01 | 100.0% | 75.0% |
| 1l3iA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 40.0 | 3.12e-01 | 95.2% | 33.0% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.57 | 50.0 | 3.74e-01 | 100.0% | 80.9% |
| 1vigA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 37.0 | 3.91e-01 | 98.8% | 77.5% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 3.57e-01 | 100.0% | 52.5% |
| 1go3E02 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.56 | 44.0 | 4.49e-01 | 100.0% | 90.1% |
| 1wzaA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 31.0 | 3.20e-01 | 98.8% | 53.2% |
| 2ed6A01 | 2.60.40.2770 | Mainly Beta › Sandwich › Immunoglobulin-like › WSSV envelope protein-like | 0.55 | 49.0 | 4.01e-01 | 98.8% | 98.7% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.55 | 49.0 | 4.10e-01 | 100.0% | 77.8% |
| 3thpA02 | 2.60.120.1520 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 38.0 | 3.21e-01 | 74.7% | 88.2% |
| 6qdws00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.54 | 47.0 | 4.31e-01 | 97.6% | 100.0% |
| 5yl6A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.54 | 43.0 | 3.45e-01 | 89.2% | 93.8% |
| 1nbwA02 | 3.90.470.30 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Coenzyme B12-Dependent Enzyme linker domain | 0.54 | 47.0 | 3.99e-01 | 100.0% | 98.6% |
| 2rdqA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.53 | 44.0 | 3.21e-01 | 95.2% | 83.8% |
| 1vq8R00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.53 | 47.0 | 3.88e-01 | 100.0% | 92.0% |
| 1i72A00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.52 | 41.0 | 2.98e-01 | 86.7% | 70.9% |
| 1p7lA03 | 3.30.300.10 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.52 | 36.0 | 3.33e-01 | 86.7% | 55.7% |
| 3kl0D01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 41.0 | 3.79e-01 | 98.8% | 66.0% |
| 3btxA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.52 | 44.0 | 3.32e-01 | 92.8% | 93.1% |
| 3ayhB01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.52 | 41.0 | 4.18e-01 | 100.0% | 94.9% |
| 5tvfD00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.52 | 40.0 | 2.90e-01 | 86.7% | 67.8% |
| 1ivyB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.62e-01 | 89.2% | 64.9% |
| 4hvzA02 | 3.30.70.2970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 | 0.51 | 45.0 | 4.09e-01 | 100.0% | 74.1% |
| 2hzmB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.51 | 45.0 | 3.28e-01 | 98.8% | 81.5% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3241590 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.65 | 45.0 | 4.51e-01 | 100.0% | 69.4% |
| 4990899 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.65 | 45.0 | 4.05e-01 | 100.0% | 52.2% |
| 3828057 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.64 | 46.0 | 4.53e-01 | 100.0% | 70.0% |
| 4260992 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.63 | 43.0 | 3.30e-01 | 97.6% | 31.1% |
| 3719272 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.63 | 45.0 | 4.77e-01 | 100.0% | 90.0% |
| 3658915 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.61 | 44.0 | 4.25e-01 | 100.0% | 66.3% |
| 3684423 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.61 | 44.0 | 4.13e-01 | 100.0% | 63.0% |
| 3409988 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.60 | 40.0 | 3.68e-01 | 100.0% | 51.8% |
| 3507456 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.60 | 40.0 | 3.87e-01 | 100.0% | 60.0% |
| 3198976 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.60 | 32.0 | 3.34e-01 | 100.0% | 56.0% |
| 4028344 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.59 | 42.0 | 4.32e-01 | 100.0% | 77.5% |
| 3508566 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 39.0 | 3.57e-01 | 100.0% | 51.8% |
| None | — | 0.59 | 41.0 | 3.14e-01 | 96.4% | 32.6% | |
| 3490645 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.58 | 52.0 | 4.38e-01 | 100.0% | 73.6% |
| 9346 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.57 | 40.0 | 3.12e-01 | 95.2% | 32.8% |
| 4246133 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.57 | 51.0 | 4.90e-01 | 100.0% | 89.5% |
| 137658 | 323.1.1.1 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh | 0.57 | 50.0 | 3.70e-01 | 100.0% | 77.7% |
| 3174324 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.57 | 42.0 | 4.21e-01 | 98.8% | 76.5% |
| 3803907 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.57 | 48.0 | 4.77e-01 | 100.0% | 91.8% |
| 3616855 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.57 | 49.0 | 3.52e-01 | 100.0% | 99.2% |
| 4028720 | 273.1.1.2 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CEP76_C | 0.57 | 42.0 | 3.70e-01 | 100.0% | 51.5% |
| 3793874 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.56 | 51.0 | 4.53e-01 | 100.0% | 74.2% |
| 4083827 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.56 | 49.0 | 3.65e-01 | 100.0% | 38.1% |
| 4929832 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.56 | 44.0 | 4.14e-01 | 100.0% | 69.2% |
| 4322566 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.55 | 47.0 | 4.54e-01 | 100.0% | 82.1% |
| 3737318 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.55 | 44.0 | 3.46e-01 | 89.2% | 85.8% |
| 3967659 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.55 | 38.0 | 2.97e-01 | 100.0% | 31.3% |
| 2755644 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.54 | 46.0 | 3.88e-01 | 100.0% | 55.0% |
| 3981520 | 872.3.1.4 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › DUF4156 | 0.54 | 43.0 | 4.23e-01 | 100.0% | 79.8% |
| None | — | 0.54 | 47.0 | 3.62e-01 | 100.0% | 57.1% | |
| 4163553 | 301.2.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like | 0.54 | 47.0 | 3.38e-01 | 100.0% | 44.2% |
| 3270055 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.54 | 47.0 | 4.01e-01 | 98.8% | 80.0% |
| 3942243 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 47.0 | 4.00e-01 | 100.0% | 60.0% |
| 3524770 | 358.1.1.3 ↗ | a+b complex topology › SRCR-like › SRCR-like › SRCR-like › SRCR_2 | 0.53 | 46.0 | 4.40e-01 | 95.2% | 94.7% |
| 3191454 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.53 | 47.0 | 3.87e-01 | 100.0% | 66.5% |
| 5035788 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.53 | 46.0 | 3.91e-01 | 100.0% | 92.4% |
| 4471513 | 3249.1.1.1 ↗ | beta sandwiches › beta-sandwich domain in YqeH GTPase › beta-sandwich domain in YqeH GTPase › beta-sandwich domain in YqeH GTPase › YqeH-like_C | 0.53 | 44.0 | 3.71e-01 | 95.2% | 93.3% |
| 3740450 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.52 | 39.0 | 3.82e-01 | 96.4% | 72.2% |
| 4931813 | 2003.1.5.179 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 | 0.52 | 35.0 | 2.91e-01 | 100.0% | 35.8% |
| 3604663 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.52 | 41.0 | 3.70e-01 | 94.0% | 81.5% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 36.0 | 3.48e-01 | 94.0% | 64.2% |
| 3624392 | 3535.1.1.0 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 | 0.51 | 46.0 | 3.27e-01 | 100.0% | 37.7% |
| 4029072 | 304.28.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Patched | 0.50 | 45.0 | 2.56e-01 | 100.0% | 14.2% |
D2
high
residues 114-162
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e3hA03 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.78 | 64.0 | 4.15e-01 | 89.8% | 63.4% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.77 | 63.0 | 5.12e-01 | 100.0% | 50.0% |
| 3tqmA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.75 | 64.0 | 5.20e-01 | 100.0% | 51.1% |
| 4p6zM01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.73 | 53.0 | 4.08e-01 | 100.0% | 33.1% |
| 1okjB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 52.0 | 3.91e-01 | 95.9% | 30.7% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.70 | 50.0 | 4.70e-01 | 95.9% | 60.0% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.68 | 50.0 | 4.38e-01 | 95.9% | 51.9% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 51.0 | 3.36e-01 | 81.6% | 22.1% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.68 | 55.0 | 4.42e-01 | 100.0% | 44.0% |
| 4i1sB00 | 4.10.80.340 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.67 | 42.0 | 4.22e-01 | 77.6% | 61.5% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.65 | 54.0 | 3.89e-01 | 100.0% | 31.1% |
| 5ttjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 57.0 | 3.70e-01 | 100.0% | 94.6% |
| 2wxfA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 47.0 | 3.66e-01 | 98.0% | 33.6% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.64 | 45.0 | 3.15e-01 | 87.8% | 22.2% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.63 | 47.0 | 3.87e-01 | 93.9% | 43.5% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.63 | 45.0 | 3.69e-01 | 85.7% | 39.4% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 49.0 | 4.07e-01 | 87.8% | 68.6% |
| 4je3B00 | 3.10.20.720 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 41.0 | 3.60e-01 | 71.4% | 61.0% |
| 1oo0A00 | 3.30.1560.10 | Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi | 0.60 | 51.0 | 3.70e-01 | 95.9% | 88.9% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 48.0 | 3.31e-01 | 93.9% | 78.9% |
| 5hn3A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.59 | 52.0 | 3.14e-01 | 100.0% | 29.2% |
| 3gdoA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 51.0 | 3.38e-01 | 98.0% | 96.5% |
| 5w0kA01 | 3.90.380.20 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II | 0.58 | 51.0 | 3.09e-01 | 100.0% | 42.8% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 43.0 | 3.56e-01 | 81.6% | 83.0% |
| 3o2iA00 | 3.30.70.2710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.71e-01 | 91.8% | 55.9% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.56 | 46.0 | 2.89e-01 | 93.9% | 92.1% |
| 2r7fA03 | 4.10.80.30 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6 | 0.56 | 30.0 | 3.31e-01 | 75.5% | 100.0% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 39.0 | 3.55e-01 | 89.8% | 52.6% |
| 1wduB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 42.0 | 2.78e-01 | 87.8% | 19.2% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 39.0 | 3.29e-01 | 75.5% | 72.9% |
| 2fiaB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 45.0 | 3.21e-01 | 95.9% | 29.6% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.54 | 39.0 | 3.82e-01 | 95.9% | 71.9% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 47.0 | 3.94e-01 | 98.0% | 98.8% |
| 7uclA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 43.0 | 3.44e-01 | 89.8% | 49.0% |
| 1t3yA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 39.0 | 3.08e-01 | 89.8% | 56.5% |
| 3mweB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 37.0 | 2.73e-01 | 75.5% | 94.9% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.53 | 48.0 | 3.44e-01 | 100.0% | 62.7% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.53 | 46.0 | 3.38e-01 | 100.0% | 78.8% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 46.0 | 2.95e-01 | 100.0% | 38.3% |
| 3en9A03 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 45.0 | 3.98e-01 | 100.0% | 67.1% |
| 5cm2Z00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 39.0 | 2.69e-01 | 83.7% | 54.3% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 46.0 | 3.46e-01 | 100.0% | 75.7% |
| 1ex0B02 | 3.90.260.10 | Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like | 0.51 | 41.0 | 2.55e-01 | 93.9% | 23.0% |
| 3ihlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 39.0 | 2.65e-01 | 91.8% | 66.4% |
| 4q1vA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.51 | 37.0 | 2.28e-01 | 87.8% | 92.6% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050683 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.83 | 67.0 | 4.96e-01 | 100.0% | 35.2% |
| 4954522 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.79 | 61.0 | 4.88e-01 | 83.7% | 89.4% |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.77 | 57.0 | 4.82e-01 | 79.6% | 98.7% |
| 4564327 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.73 | 57.0 | 4.71e-01 | 83.7% | 85.5% |
| 4931277 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.73 | 60.0 | 4.10e-01 | 87.8% | 45.2% |
| 5029914 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.73 | 55.0 | 5.34e-01 | 85.7% | 74.5% |
| 5080802 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.73 | 59.0 | 5.60e-01 | 93.9% | 78.3% |
| 4977735 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.72 | 57.0 | 3.79e-01 | 85.7% | 53.1% |
| 3480610 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.71 | 52.0 | 4.71e-01 | 81.6% | 100.0% |
| 4991990 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.69 | 62.0 | 4.81e-01 | 100.0% | 48.0% |
| 5049862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 56.0 | 3.76e-01 | 87.8% | 39.4% |
| 3605370 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.68 | 47.0 | 4.53e-01 | 95.9% | 61.7% |
| 5078000 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.68 | 49.0 | 3.02e-01 | 79.6% | 12.7% |
| 3988478 | 857.1.1.1 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › ZapA | 0.68 | 50.0 | 4.02e-01 | 100.0% | 39.8% |
| 3326759 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.68 | 48.0 | 4.27e-01 | 77.6% | 90.7% |
| 5073431 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.68 | 55.0 | 3.15e-01 | 93.9% | 22.1% |
| 3487129 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.67 | 57.0 | 4.71e-01 | 95.9% | 81.1% |
| 3233262 | 706.1.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE | 0.67 | 44.0 | 4.83e-01 | 83.7% | 94.3% |
| 4983992 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.66 | 53.0 | 3.73e-01 | 87.8% | 41.9% |
| 3890772 | 263.1.1.0 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like | 0.66 | 55.0 | 4.73e-01 | 93.9% | 58.7% |
| 3583046 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.66 | 46.0 | 4.57e-01 | 89.8% | 69.1% |
| 3433449 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.66 | 53.0 | 3.38e-01 | 100.0% | 26.5% |
| 3586391 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.65 | 49.0 | 2.97e-01 | 81.6% | 35.2% |
| 2880851 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.65 | 44.0 | 3.27e-01 | 73.5% | 37.6% |
| 5081199 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.64 | 53.0 | 3.81e-01 | 91.8% | 48.7% |
| 3259141 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.64 | 47.0 | 4.43e-01 | 89.8% | 65.0% |
| 3679515 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.64 | 49.0 | 5.07e-01 | 95.9% | 91.1% |
| 4647118 | 5086.1.1.119 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › RRG1_C | 0.64 | 52.0 | 3.39e-01 | 100.0% | 20.0% |
| 4304389 | 5086.1.1.119 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › RRG1_C | 0.64 | 54.0 | 3.49e-01 | 93.9% | 53.6% |
| 5010744 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 55.0 | 5.06e-01 | 100.0% | 83.1% |
| 4998031 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.63 | 57.0 | 3.87e-01 | 100.0% | 49.1% |
| 3733364 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 47.0 | 2.77e-01 | 81.6% | 23.7% |
| 4987228 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 53.0 | 3.66e-01 | 100.0% | 28.4% |
| 4001707 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.61 | 46.0 | 4.06e-01 | 93.9% | 51.8% |
| 3723552 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.61 | 51.0 | 2.90e-01 | 89.8% | 34.3% |
| 5010022 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.61 | 50.0 | 4.32e-01 | 100.0% | 92.9% |
| 5006770 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.61 | 51.0 | 3.46e-01 | 89.8% | 43.1% |
| 1815422 | 566.1.1.3 ↗ | alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related › Pneumo_ncap | 0.61 | 53.0 | 3.42e-01 | 98.0% | 43.2% |
| 5066982 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.60 | 46.0 | 3.26e-01 | 98.0% | 28.6% |
| 3798829 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 53.0 | 3.42e-01 | 100.0% | 48.4% |
| 3208120 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.60 | 52.0 | 3.59e-01 | 95.9% | 83.2% |
| 3482807 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.60 | 48.0 | 3.93e-01 | 100.0% | 76.9% |
| 4997639 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 53.0 | 4.13e-01 | 100.0% | 67.6% |
| 4608174 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.59 | 43.0 | 3.72e-01 | 98.0% | 46.7% |
| 1281886 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.59 | 40.0 | 3.61e-01 | 98.0% | 46.8% |
| 4954852 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.58 | 50.0 | 3.35e-01 | 93.9% | 87.3% |
| 3921728 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 51.0 | 3.89e-01 | 100.0% | 88.7% |
| 3265334 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 47.0 | 3.77e-01 | 100.0% | 50.0% |
| 3600134 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 39.0 | 3.34e-01 | 87.8% | 40.0% |
| 3905302 | 284.1.3.8 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › Fy-3 | 0.55 | 48.0 | 4.03e-01 | 98.0% | 60.0% |
| 3857887 | 5094.1.1.11 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › Fy-3 | 0.55 | 49.0 | 4.25e-01 | 100.0% | 68.0% |
| 3774738 | 7529.1.1.11 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 | 0.55 | 49.0 | 4.07e-01 | 100.0% | 60.0% |
| 3560901 | 601.19.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Fy-3 | 0.55 | 49.0 | 4.23e-01 | 100.0% | 68.0% |
| 3708849 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.54 | 46.0 | 2.96e-01 | 100.0% | 32.9% |
| 3167354 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.54 | 49.0 | 4.24e-01 | 100.0% | 74.0% |
| 3367891 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.54 | 41.0 | 2.57e-01 | 87.8% | 13.8% |
| 4957785 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.53 | 45.0 | 3.53e-01 | 98.0% | 81.8% |
| 4999526 | 7569.1.1.1 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG | 0.52 | 41.0 | 2.93e-01 | 100.0% | 52.6% |
| 5030555 | 3433.1.1.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain | 0.52 | 36.0 | 3.86e-01 | 98.0% | 90.0% |
| 3962463 | 4011.1.1.0 ↗ | beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins | 0.51 | 43.0 | 4.18e-01 | 100.0% | 83.6% |
| 4941285 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.51 | 37.0 | 3.35e-01 | 79.6% | 90.0% |