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OM223115.1__UKL14921.1__hairong_015__00015

Bact-Vir

OM223115.1__UKL14921.1__hairong_015__00015

Identity

Accession:
OM223115 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-156
PDB
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jadA00 1.20.1230.10 Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain 0.80 64.0 5.43e-01 84.1% 89.3%
4gnkE00 1.20.1230.10 Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain 0.78 59.0 5.06e-01 78.8% 85.1%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.76 54.0 6.24e-01 84.8% 100.0%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.75 54.0 6.25e-01 86.1% 100.0%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.74 52.0 6.04e-01 85.4% 100.0%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.70 49.0 5.60e-01 84.1% 98.2%
5mlc900 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.70 48.0 5.57e-01 82.1% 99.1%
4adzA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.67 40.0 4.96e-01 70.9% 98.9%
2gb7D00 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.65 58.0 4.63e-01 95.4% 95.5%
16vpA00 1.10.1290.10 Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) 0.65 58.0 4.51e-01 94.7% 89.7%
2zy9A03 1.10.357.20 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain 0.65 52.0 4.97e-01 96.7% 73.6%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.65 53.0 5.65e-01 87.4% 97.7%
2o5iN07 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.64 46.0 5.16e-01 96.0% 94.8%
4hzuS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.64 39.0 3.85e-01 100.0% 55.5%
5a0uA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.64 58.0 3.68e-01 100.0% 86.8%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.63 25.0 3.44e-01 73.5% 70.7%
4bejB02 1.20.120.1240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain 0.63 57.0 5.01e-01 100.0% 71.7%
3snhA02 1.20.120.1240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain 0.63 57.0 5.07e-01 100.0% 72.7%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.61 41.0 4.77e-01 85.4% 96.3%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.60 41.0 4.78e-01 86.8% 98.1%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.59 42.0 4.51e-01 100.0% 85.4%
1rz4A01 1.25.40.250 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 0.59 24.0 2.63e-01 74.2% 42.5%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.58 41.0 4.55e-01 86.8% 92.3%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 38.0 4.57e-01 78.8% 98.0%
1owaA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 38.0 4.43e-01 82.8% 98.1%
6o7uc01 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.56 43.0 3.95e-01 87.4% 63.2%
1e2aA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.55 37.0 4.35e-01 86.1% 100.0%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.55 37.0 4.25e-01 84.8% 100.0%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 39.0 4.37e-01 86.1% 96.5%
3ripA02 1.20.120.1900 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain 0.55 42.0 3.44e-01 80.8% 94.3%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 32.0 3.62e-01 83.4% 75.9%
6z0fA02 1.25.40.680 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain 0.54 33.0 3.18e-01 87.4% 54.2%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.54 36.0 4.23e-01 85.4% 99.0%
2y44A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.53 42.0 3.91e-01 82.1% 83.7%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 37.0 4.19e-01 83.4% 95.5%
1sziA02 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.53 40.0 4.25e-01 100.0% 87.6%
3mzsA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 48.0 3.39e-01 99.3% 64.5%
3o6xA02 1.20.120.1560 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 37.0 3.80e-01 74.2% 73.0%
3ezuA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 34.0 3.19e-01 92.1% 53.3%
2j0nB00 1.20.1710.10 Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like 0.53 47.0 4.39e-01 98.7% 77.5%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 40.0 4.29e-01 95.4% 93.0%
1hciA03 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 39.0 4.31e-01 86.1% 98.3%
2x64A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 37.0 4.25e-01 100.0% 98.2%
1zzpA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.52 34.0 3.87e-01 95.4% 89.0%
2ce7B03 1.20.58.760 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 0.51 41.0 3.97e-01 92.7% 75.6%
3q1xA01 1.10.3130.10 Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 0.51 36.0 3.76e-01 88.1% 79.1%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931441 3835.1.1.0 alpha bundles › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein 0.82 63.0 5.48e-01 78.8% 95.8%
5010020 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.76 48.0 5.44e-01 74.2% 83.5%
3209632 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.75 53.0 6.19e-01 86.1% 99.1%
5018956 1075.1.1.12 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › CcmB 0.75 54.0 4.72e-01 79.5% 49.8%
5063060 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.75 59.0 5.42e-01 82.8% 86.7%
3217375 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.74 58.0 5.40e-01 79.5% 88.9%
3963163 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.74 56.0 5.60e-01 83.4% 76.1%
3479807 5079.1.1.0 alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain 0.73 61.0 5.57e-01 97.4% 67.0%
3542784 5079.1.1.1 alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE 0.73 62.0 5.41e-01 97.4% 60.4%
4667148 601.19.1.0 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.73 60.0 5.29e-01 88.1% 60.0%
4828003 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.73 56.0 6.23e-01 88.1% 100.0%
3258661 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.72 59.0 5.29e-01 86.1% 78.5%
3637359 604.10.1.7 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › DUF202 0.72 47.0 5.66e-01 83.4% 100.0%
3598318 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.72 63.0 5.35e-01 92.7% 93.2%
1546262 601.19.1.0 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.72 66.0 6.11e-01 100.0% 78.7%
3978383 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.71 57.0 5.30e-01 83.4% 83.8%
4135589 601.19.1.1 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Apolipoprotein 0.71 67.0 5.13e-01 100.0% 52.2%
4963961 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.70 56.0 5.19e-01 83.4% 86.3%
3172946 601.19.1.40 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › PF28954 0.70 59.0 5.54e-01 88.1% 81.7%
5000899 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.70 56.0 4.86e-01 84.8% 97.4%
4998866 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.70 58.0 5.29e-01 88.7% 71.0%
4018207 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.70 57.0 5.57e-01 97.4% 78.8%
5047526 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.70 59.0 4.98e-01 90.1% 98.0%
5062487 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.69 58.0 5.62e-01 88.1% 95.2%
3928340 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.69 57.0 5.29e-01 86.8% 98.9%
3264853 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.69 54.0 5.71e-01 86.1% 91.9%
4943658 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.68 54.0 5.08e-01 83.4% 82.7%
4988228 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.68 56.0 5.14e-01 86.8% 90.8%
3519952 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.68 55.0 4.61e-01 84.8% 88.0%
4978069 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.68 57.0 5.16e-01 88.1% 85.4%
4032038 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.67 58.0 4.14e-01 92.1% 58.4%
3630257 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.67 55.0 5.24e-01 87.4% 97.2%
4939754 7064.1.1.1 alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 0.67 58.0 5.43e-01 96.0% 75.1%
4843090 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.67 48.0 5.48e-01 83.4% 100.0%
3601090 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 53.0 4.80e-01 82.8% 66.0%
4973374 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.66 54.0 5.02e-01 88.7% 68.9%
3221299 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.66 53.0 5.59e-01 86.8% 93.3%
3414672 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.66 54.0 5.05e-01 87.4% 90.0%
3573678 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.66 54.0 4.97e-01 86.8% 75.4%
5044690 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.66 57.0 5.02e-01 92.7% 100.0%
4236667 3615.1.1.0 alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.66 61.0 5.06e-01 100.0% 73.3%
5078461 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.65 54.0 4.90e-01 88.7% 66.3%
3590372 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.65 53.0 4.97e-01 85.4% 85.6%
4319342 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.65 54.0 5.08e-01 89.4% 85.4%
3420043 1075.5.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter 0.65 51.0 5.04e-01 100.0% 78.1%
3743731 3615.1.1.0 alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.65 59.0 5.26e-01 100.0% 71.0%
4094628 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.64 54.0 4.80e-01 88.1% 85.6%
4946373 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.64 52.0 4.99e-01 86.1% 85.1%
3295189 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.63 57.0 5.56e-01 98.0% 94.5%
4946748 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.63 52.0 4.88e-01 87.4% 86.7%
3375753 7064.1.1.1 alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 0.61 55.0 5.16e-01 98.7% 78.7%
4958181 1075.5.1.4 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt 0.61 47.0 4.28e-01 99.3% 59.0%
3731685 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.61 56.0 5.20e-01 98.7% 85.4%
3718430 1065.1.1.0 alpha bundles › SPX domain › SPX domain › SPX domain 0.60 54.0 5.26e-01 96.0% 94.5%
3330980 1075.5.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter 0.60 51.0 4.32e-01 90.1% 74.3%
3989110 1075.5.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.60 49.0 4.44e-01 99.3% 63.9%
3588793 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.60 48.0 4.61e-01 85.4% 76.6%
3913373 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.59 43.0 4.82e-01 93.4% 94.2%
3521054 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.59 44.0 4.06e-01 76.2% 82.6%
3913487 604.1.1.124 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 0.59 42.0 4.82e-01 76.2% 100.0%
3669852 1075.5.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter 0.59 48.0 4.13e-01 100.0% 55.3%
4444459 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.57 36.0 2.97e-01 74.2% 33.8%
4027330 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.57 44.0 4.76e-01 87.4% 93.8%
3733682 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.56 46.0 3.85e-01 87.4% 95.3%
3347110 3684.1.1.2 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 0.53 47.0 4.04e-01 98.7% 62.6%
4026597 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.51 46.0 4.22e-01 100.0% 78.0%
5057325 604.39.1.3 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS 0.51 46.0 4.29e-01 97.4% 96.8%
D2 high residues 175-231
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 4.90e-01 75.4% 87.7%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 40.0 3.44e-01 96.5% 37.2%
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.68 58.0 4.84e-01 100.0% 83.0%
5i47B02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.66 55.0 5.32e-01 98.2% 88.1%
2dewX03 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.62 52.0 3.25e-01 100.0% 30.8%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 51.0 4.73e-01 100.0% 97.5%
1a0iA01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.60 49.0 4.45e-01 96.5% 68.7%
3zlaD01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.59 45.0 3.64e-01 89.5% 65.9%
2kkcA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 49.0 4.19e-01 100.0% 96.0%
7dklA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 3.90e-01 94.7% 90.4%
3g87A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.55 36.0 3.54e-01 70.2% 98.5%
1u3eM02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.64e-01 75.4% 77.9%
1xdnA01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.53 44.0 3.67e-01 98.2% 68.2%
3w1sC00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 44.0 4.11e-01 100.0% 92.1%
2felA00 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.53 46.0 2.85e-01 100.0% 22.3%
1hywA00 3.30.1580.10 Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W 0.53 39.0 3.92e-01 89.5% 82.8%
3l0gB01 3.90.1170.20 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain 0.53 39.0 3.19e-01 82.5% 83.1%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 43.0 3.05e-01 100.0% 36.9%
2ganA02 6.20.300.10 Special › Other non-globular › CbiD-like › 0.52 29.0 3.29e-01 100.0% 74.4%
2o5hA00 1.10.3510.10 Mainly Alpha › Orthogonal Bundle › NMB0513-like › NMB0513-like 0.51 40.0 3.33e-01 98.2% 67.2%
7x0fA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.51 41.0 3.12e-01 93.0% 89.9%
7lscA01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.50 42.0 3.22e-01 100.0% 75.8%
3l4gC03 1.10.10.2330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 29.0 3.03e-01 98.2% 58.5%
3purA02 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.50 41.0 2.71e-01 100.0% 43.8%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 40.0 2.95e-01 89.5% 96.4%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057781 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.72 41.0 3.62e-01 96.5% 40.0%
3817314 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.68 59.0 3.28e-01 100.0% 14.1%
4974678 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.65 44.0 3.51e-01 71.9% 95.0%
5056282 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.65 48.0 3.72e-01 80.7% 43.1%
2573463 302.3.1.0 a+b two layers › Reverse ferredoxin › a+b domain in low-molecular-weight S-layer protein › a+b domain in low-molecular-weight S-layer protein 0.64 53.0 4.74e-01 100.0% 74.2%
4027679 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.64 49.0 4.13e-01 87.7% 50.5%
4463557 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 47.0 4.10e-01 86.0% 52.6%
3718200 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.62 47.0 3.78e-01 87.7% 47.2%
4410759 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 47.0 3.89e-01 87.7% 46.1%
4835634 302.3.1.1 a+b two layers › Reverse ferredoxin › a+b domain in low-molecular-weight S-layer protein › a+b domain in low-molecular-weight S-layer protein › LMWSLP_N 0.61 50.0 4.82e-01 96.5% 80.6%
4029803 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 47.0 3.72e-01 87.7% 41.5%
3931570 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 51.0 4.09e-01 100.0% 56.8%
3594965 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 44.0 3.41e-01 86.0% 32.9%
4090024 4246.1.1.2 a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 0.61 47.0 3.01e-01 89.5% 71.9%
3928079 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.34e-01 100.0% 71.0%
3296578 355.1.1.0 few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like 0.60 37.0 4.01e-01 70.2% 75.6%
3229643 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.60 47.0 3.75e-01 87.7% 45.0%
4128317 221.2.1.2 a+b two layers › beta-Grasp › IF3-N › IF3-N › mIF3 0.59 48.0 4.41e-01 100.0% 68.8%
4030186 5051.1.1.0 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like 0.59 47.0 2.82e-01 100.0% 10.5%
4199672 2492.1.1.0 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.58 44.0 3.81e-01 84.2% 95.8%
4931648 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.58 42.0 3.30e-01 80.7% 45.3%
5060750 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.58 42.0 3.29e-01 80.7% 40.0%
3964722 241.12.1.4 a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like › HI_0552 0.57 44.0 3.22e-01 100.0% 26.3%
4176000 4954.1.1.1 a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.57 46.0 3.39e-01 100.0% 46.3%
3845539 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 38.0 3.41e-01 80.7% 45.6%
3739571 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.56 34.0 3.23e-01 98.2% 47.1%
4239635 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.56 37.0 2.67e-01 70.2% 40.0%
5039495 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.56 40.0 3.22e-01 82.5% 41.5%
4970576 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.56 40.0 2.79e-01 77.2% 44.4%
3772534 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.55 37.0 3.38e-01 80.7% 48.2%
3509315 6171.1.1.0 alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases 0.55 39.0 2.87e-01 87.7% 27.7%
4985164 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.55 40.0 3.22e-01 82.5% 45.7%
3259222 5051.1.1.6 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans 0.55 45.0 2.78e-01 100.0% 13.5%
5030071 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.54 39.0 3.26e-01 82.5% 47.5%
4221024 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 34.0 2.40e-01 70.2% 17.6%
3819239 221.1.1.13 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › AUX_IAA 0.54 45.0 3.94e-01 100.0% 82.1%
3439460 10.12.1.101 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 0.54 43.0 2.68e-01 91.2% 48.6%
4029404 5051.1.1.0 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like 0.54 44.0 2.73e-01 100.0% 17.7%
4527101 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.53 37.0 2.70e-01 71.9% 43.8%
3197747 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 3.68e-01 96.5% 91.6%
4025192 4988.1.1.0 a+b two layers › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain › Ribosomal protein S8, C-terminal domain 0.52 38.0 3.74e-01 98.2% 74.6%
3782021 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.51 43.0 2.99e-01 98.2% 50.0%
5023773 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.51 35.0 2.51e-01 71.9% 24.0%
4241167 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.51 40.0 2.87e-01 86.0% 41.2%
4403519 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 33.0 2.47e-01 71.9% 22.4%
5016350 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.51 40.0 3.29e-01 94.7% 45.6%
3817039 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.51 38.0 2.55e-01 98.2% 16.9%
4985036 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.51 34.0 2.58e-01 71.9% 24.1%
4646072 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.51 33.0 2.47e-01 70.2% 22.4%
3203315 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.50 40.0 3.69e-01 100.0% 75.3%