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OM236513.1__UNY49025.1__sp82g_88__00088

Bact-Vir

OM236513.1__UNY49025.1__sp82g_88__00088

Identity

Accession:
OM236513 ↗
Kingdom:
phage

Quality

83.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-119
PDB
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.74 66.0 5.73e-01 100.0% 87.5%
2zuvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 63.0 5.48e-01 100.0% 78.3%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.72 63.0 5.08e-01 98.5% 69.5%
3qnfC01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.72 63.0 4.48e-01 100.0% 34.6%
6ea2A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.70 60.0 4.44e-01 100.0% 38.5%
5zi7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.69 60.0 4.43e-01 100.0% 38.9%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.65 57.0 4.15e-01 100.0% 39.4%
4psrA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 56.0 4.68e-01 100.0% 68.0%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.65 53.0 5.14e-01 94.0% 98.7%
1rgxA02 2.60.40.4230 Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain 0.64 49.0 5.01e-01 100.0% 87.5%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 55.0 5.09e-01 98.5% 78.7%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.64 55.0 3.30e-01 100.0% 13.9%
2xq0A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.63 55.0 4.09e-01 100.0% 40.8%
4rlzA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.63 53.0 4.59e-01 98.5% 97.3%
3ciaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.63 54.0 4.01e-01 100.0% 40.8%
3l4yA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 53.0 4.28e-01 98.5% 55.8%
3orjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 53.0 5.02e-01 100.0% 87.1%
1d1nA00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 53.0 4.75e-01 100.0% 92.9%
2zgoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 54.0 4.11e-01 100.0% 92.2%
1r5bA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 51.0 4.72e-01 95.5% 96.6%
1o59A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 53.0 4.24e-01 98.5% 100.0%
3uh8A00 2.60.40.3350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 50.0 4.27e-01 94.0% 83.1%
1hkvA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.62 53.0 3.92e-01 98.5% 53.5%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 51.0 4.61e-01 95.5% 77.1%
4gafB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 50.0 4.42e-01 95.5% 74.5%
1stmA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.61 52.0 4.19e-01 100.0% 94.3%
2aefA03 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.61 50.0 4.74e-01 100.0% 77.2%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 51.0 4.74e-01 98.5% 74.4%
7kbrC01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 49.0 3.97e-01 92.5% 54.5%
4lhsA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 51.0 4.02e-01 100.0% 58.4%
4gx0B03 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.59 47.0 4.55e-01 100.0% 76.9%
3es1A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 53.0 4.29e-01 100.0% 60.3%
3oq3B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 4.28e-01 94.0% 74.0%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 51.0 4.54e-01 100.0% 74.7%
1df0A03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 4.05e-01 100.0% 95.5%
1vioA03 3.30.70.1560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif 0.58 43.0 4.09e-01 82.1% 80.5%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 3.61e-01 100.0% 86.6%
5xnpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.44e-01 100.0% 86.4%
1mkfA01 2.60.40.1330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 47.0 3.53e-01 100.0% 46.7%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.57 48.0 3.82e-01 100.0% 55.6%
1ok0A00 2.60.40.20 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-amylase inhibitor 0.57 47.0 4.59e-01 97.0% 89.2%
4cbpB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 46.0 4.15e-01 100.0% 73.1%
6a48A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 47.0 3.79e-01 100.0% 68.5%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.62e-01 100.0% 66.7%
2crmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 4.28e-01 94.0% 89.9%
3isyA00 2.60.40.2360 Mainly Beta › Sandwich › Immunoglobulin-like › Intracellular proteinase inhibitor BsuPI 0.55 45.0 3.89e-01 97.0% 82.1%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.97e-01 100.0% 84.6%
2j1vA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 47.0 3.80e-01 100.0% 58.2%
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.55 47.0 4.16e-01 100.0% 97.1%
1fyhB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.13e-01 100.0% 77.3%
5oyjC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 4.17e-01 100.0% 77.9%
2gy5A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.06e-01 100.0% 82.8%
3demA03 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.54 46.0 3.93e-01 97.0% 93.0%
1ig3A01 2.60.120.320 Mainly Beta › Sandwich › Jelly Rolls › Thiamin pyrophosphokinase, thiamin-binding domain 0.54 45.0 4.08e-01 98.5% 86.6%
4j3vA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 45.0 4.35e-01 97.0% 84.4%
2pn5A02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.54 44.0 3.94e-01 95.5% 84.2%
1vj2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 46.0 3.97e-01 100.0% 68.4%
1gycA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.54 45.0 3.36e-01 100.0% 34.7%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 45.0 3.49e-01 100.0% 60.1%
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.53 40.0 2.91e-01 86.6% 48.5%
1gw5M02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.52 43.0 3.50e-01 97.0% 76.6%
3ocpB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 45.0 3.72e-01 100.0% 90.6%
3kq4B04 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.51 43.0 3.77e-01 100.0% 91.9%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 42.0 3.81e-01 100.0% 70.2%
3snyA00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.51 39.0 3.70e-01 88.1% 93.1%
8bk6A01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 42.0 3.64e-01 94.0% 90.0%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957573 11.41.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Baseplate wedge protein gp6 Ig-like domain › Baseplate wedge protein gp6 Ig-like domain 0.79 72.0 6.93e-01 100.0% 97.3%
3978227 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.78 69.0 6.65e-01 100.0% 96.0%
4028153 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.71 63.0 4.54e-01 100.0% 39.5%
4960841 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.70 63.0 4.60e-01 100.0% 39.4%
5040562 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 59.0 5.42e-01 97.0% 90.0%
4586058 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.69 58.0 5.04e-01 95.5% 81.9%
3231737 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 58.0 5.25e-01 100.0% 77.9%
5046975 1.1.7.21 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.66 57.0 5.45e-01 98.5% 95.0%
5040750 4261.1.1.0 a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like 0.66 49.0 5.25e-01 100.0% 96.4%
5073223 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 57.0 5.33e-01 100.0% 91.8%
5036581 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.66 56.0 5.01e-01 98.5% 77.0%
5024154 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 56.0 5.23e-01 97.0% 91.8%
3414624 4081.1.1.7 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.66 57.0 4.24e-01 100.0% 41.7%
1126319 12.1.1.25 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C 0.65 56.0 4.72e-01 100.0% 68.0%
3530838 4182.1.1.7 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › Mucin2_WxxW 0.65 56.0 5.26e-01 100.0% 94.1%
3868286 12.1.1.61 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Mucin2_WxxW 0.65 56.0 5.21e-01 100.0% 94.1%
4217174 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 55.0 5.52e-01 100.0% 98.6%
5042583 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.64 56.0 5.01e-01 100.0% 77.9%
3276491 12.2.1.8 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556 0.64 55.0 4.52e-01 100.0% 59.4%
141846 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.64 56.0 3.97e-01 100.0% 35.9%
3228358 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.63 56.0 5.00e-01 100.0% 81.1%
3927342 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 54.0 4.82e-01 100.0% 79.0%
3973332 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 53.0 5.21e-01 100.0% 98.7%
3292420 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.62 51.0 4.74e-01 95.5% 76.7%
3877348 4178.1.1.0 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.62 52.0 4.20e-01 97.0% 55.8%
5043435 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.62 54.0 4.03e-01 100.0% 43.4%
3785564 10.32.1.244 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29989 0.61 53.0 4.46e-01 100.0% 94.2%
3933157 11.1.1.1085 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GBD_IRG7_N 0.61 53.0 4.73e-01 100.0% 78.0%
3903107 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 52.0 4.76e-01 100.0% 83.2%
3214876 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.68e-01 100.0% 78.0%
1868507 4178.1.1.1 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 0.61 52.0 4.15e-01 98.5% 55.0%
3935807 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.61 53.0 4.86e-01 100.0% 87.8%
3980387 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.61 49.0 3.70e-01 100.0% 36.4%
3946137 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 51.0 4.91e-01 100.0% 81.2%
3215810 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 53.0 4.25e-01 100.0% 84.4%
4170337 11.1.1.859 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set, Ig_3 0.60 51.0 3.37e-01 100.0% 24.8%
3989692 4081.1.1.12 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 0.60 52.0 3.75e-01 100.0% 40.5%
1724 11.1.1.178 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.60 49.0 4.36e-01 94.0% 72.8%
3609473 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.60 50.0 3.87e-01 100.0% 40.6%
3497317 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.60 47.0 4.63e-01 89.6% 86.7%
3549528 11.1.1.1261 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2, Ig_6 0.60 51.0 3.73e-01 98.5% 83.1%
4107101 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.60 50.0 4.58e-01 100.0% 96.8%
3220825 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 52.0 3.64e-01 100.0% 89.3%
3804238 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 50.0 4.04e-01 100.0% 80.7%
5060962 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 52.0 4.53e-01 100.0% 78.6%
3934762 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.59 52.0 4.59e-01 100.0% 93.0%
5044223 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 52.0 4.59e-01 100.0% 93.0%
5083661 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 51.0 4.42e-01 100.0% 91.7%
4027527 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.59 51.0 4.74e-01 100.0% 84.7%
3591409 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.58 50.0 4.29e-01 100.0% 87.0%
3477455 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 49.0 3.94e-01 98.5% 88.3%
4004015 10.32.1.73 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 0.58 50.0 3.96e-01 100.0% 55.2%
3623622 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 47.0 4.70e-01 98.5% 92.9%
5055778 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 50.0 4.39e-01 100.0% 68.6%
5083851 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 50.0 4.25e-01 100.0% 83.3%
3609787 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.57 49.0 4.02e-01 100.0% 69.6%
4624262 11.1.1.271 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_6 0.57 47.0 3.92e-01 97.0% 59.2%
2866916 11.1.1.178 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.57 45.0 4.24e-01 94.0% 82.4%
4969217 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 49.0 4.29e-01 100.0% 73.3%
3703651 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 47.0 4.01e-01 100.0% 88.8%
2045444 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.57 47.0 3.81e-01 100.0% 51.0%
5041180 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 49.0 4.01e-01 100.0% 55.4%
3718839 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 47.0 3.89e-01 100.0% 58.5%
4028543 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.56 49.0 4.75e-01 100.0% 97.3%
4682726 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.56 48.0 4.79e-01 100.0% 97.1%
3980984 11.1.5.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Fimbrial 0.56 46.0 3.73e-01 98.5% 95.3%
4433929 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 46.0 4.29e-01 97.0% 84.4%
4975837 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 4.18e-01 92.5% 85.6%
4941750 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 48.0 3.95e-01 100.0% 94.6%
3842840 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.56 46.0 4.02e-01 100.0% 66.1%
3624991 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 48.0 4.20e-01 100.0% 89.5%
5040615 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.55 46.0 3.92e-01 100.0% 100.0%
3590148 11.1.5.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GBS104-like_Ig 0.55 47.0 3.45e-01 100.0% 37.5%
4989606 3794.1.2.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.55 47.0 4.52e-01 100.0% 97.5%
4943895 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 3.37e-01 100.0% 35.0%
3223711 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 48.0 3.62e-01 100.0% 93.5%
3928000 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 47.0 4.53e-01 100.0% 90.0%
3875305 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 47.0 2.75e-01 100.0% 14.5%
4459811 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 46.0 3.94e-01 100.0% 98.3%
3913952 11.1.1.850 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28354 0.55 43.0 3.72e-01 92.5% 55.0%
4597423 12.2.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Vanin_C 0.55 45.0 3.66e-01 100.0% 55.3%
3357965 207.1.1.354 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_RPS2 0.54 44.0 2.58e-01 95.5% 18.1%
3562130 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 3.99e-01 100.0% 81.8%
3538225 10.32.1.216 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.54 46.0 3.55e-01 100.0% 59.4%
4594251 12.2.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Vanin_C 0.53 43.0 3.34e-01 100.0% 47.8%
4629020 11.1.5.85 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C 0.52 44.0 3.35e-01 97.0% 87.4%
3304300 11.1.6.4 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › ERMP1_C 0.52 45.0 3.18e-01 100.0% 31.3%
3185335 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 43.0 3.96e-01 100.0% 83.2%
5005734 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 3.44e-01 100.0% 81.3%
3420755 11.1.1.576 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ERMP1_C 0.52 44.0 3.14e-01 100.0% 31.1%
D2 medium residues 1-51_121-165
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kcaA00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.66 51.0 4.90e-01 100.0% 72.5%
3j7yU00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 50.0 4.84e-01 96.9% 76.6%
1xe1A00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 45.0 4.60e-01 94.8% 79.1%
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.60 55.0 5.12e-01 96.9% 90.4%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 26.0 3.27e-01 93.8% 66.7%
2xzmJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.58 40.0 3.92e-01 70.8% 73.3%
1nbwA02 3.90.470.30 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Coenzyme B12-Dependent Enzyme linker domain 0.58 40.0 3.57e-01 71.9% 99.3%
5x8tT00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.58 41.0 3.69e-01 76.0% 81.9%
5v7qT00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 46.0 4.61e-01 95.8% 88.8%
1vwxP00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.56 41.0 3.60e-01 79.2% 100.0%
6tmfM00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.56 38.0 3.82e-01 70.8% 74.5%
3p26A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 40.0 3.89e-01 81.2% 66.4%
1tvcA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 40.0 3.89e-01 94.8% 67.9%
4yg6B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 34.0 2.96e-01 91.7% 38.7%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.79e-01 93.8% 69.4%
2rc5B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 46.0 4.03e-01 95.8% 72.9%
1kqrA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 34.0 2.97e-01 91.7% 40.6%
4rx6D00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 33.0 3.21e-01 80.2% 58.9%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4235076 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 48.0 5.23e-01 95.8% 76.2%
5003311 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 59.0 5.65e-01 93.8% 78.2%
5029965 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 45.0 4.71e-01 93.8% 82.4%
3728343 4186.1.1.0 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p 0.61 51.0 4.44e-01 90.6% 79.3%
5050142 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.59 41.0 3.62e-01 70.8% 71.4%
4260208 1.1.13.62 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 0.59 51.0 4.99e-01 92.7% 96.2%
3239454 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.59 48.0 4.21e-01 90.6% 66.0%
3207693 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.59 49.0 4.45e-01 92.7% 75.6%
4057045 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.59 48.0 4.56e-01 89.6% 83.5%
3861484 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.58 43.0 4.02e-01 91.7% 61.6%
4085638 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.58 48.0 4.74e-01 91.7% 91.3%
4324097 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.58 48.0 4.77e-01 91.7% 93.0%
4939497 1.1.9.23 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.58 49.0 4.51e-01 94.8% 79.2%
4220865 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.57 47.0 4.47e-01 90.6% 89.6%
3655500 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 47.0 3.28e-01 90.6% 45.2%
2756655 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.57 47.0 4.01e-01 91.7% 61.5%
4313846 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.56 46.0 4.51e-01 90.6% 93.3%
1138674 1.1.8.11 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.56 40.0 3.89e-01 81.2% 66.4%
3674718 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 45.0 3.07e-01 90.6% 48.4%
4575287 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.55 46.0 4.40e-01 93.8% 93.8%
4124823 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.54 44.0 4.36e-01 91.7% 92.4%
3252972 246.3.1.0 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.54 44.0 3.30e-01 89.6% 84.4%
4943119 304.109.1.3 a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L15e 0.54 46.0 3.64e-01 94.8% 58.8%
5042927 304.51.1.22 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › PF29613 0.53 41.0 3.72e-01 82.3% 70.0%
3654241 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 43.0 2.67e-01 90.6% 23.2%
5078099 304.51.1.7 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 0.53 40.0 3.44e-01 81.2% 70.0%
3517061 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.53 45.0 3.61e-01 95.8% 93.8%
4945568 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.52 42.0 3.76e-01 92.7% 60.0%
3471478 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.52 35.0 3.54e-01 90.6% 67.0%
4493293 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.52 44.0 4.24e-01 95.8% 93.6%
5052927 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 36.0 3.25e-01 91.7% 51.1%
4931813 2003.1.5.179 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 0.50 38.0 3.25e-01 82.3% 84.2%