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OM249648.1__UOK16942.1__X__00275

Bact-Vir

OM249648.1__UOK16942.1__X__00275

Identity

Accession:
OM249648 ↗
Kingdom:
phage

Quality

72.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-82
PDB
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.73 51.0 4.91e-01 75.0% 64.4%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 51.0 4.07e-01 82.5% 58.8%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 46.0 3.68e-01 73.8% 85.0%
2p97A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.61 40.0 3.04e-01 75.0% 27.4%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.60 44.0 3.69e-01 78.8% 97.9%
3zhaQ02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 41.0 3.47e-01 71.2% 98.5%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.60 39.0 3.34e-01 100.0% 42.7%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 51.0 4.19e-01 91.3% 81.9%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.59 52.0 4.72e-01 100.0% 77.7%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.59 42.0 3.45e-01 75.0% 42.8%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.59 30.0 3.82e-01 85.0% 86.4%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.59 50.0 3.43e-01 92.5% 29.9%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.58 41.0 3.57e-01 76.2% 80.0%
5ncsA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.58 39.0 3.22e-01 70.0% 99.3%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.58 33.0 3.44e-01 100.0% 58.1%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 29.0 3.15e-01 97.5% 57.6%
3wirA03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.55 39.0 4.12e-01 72.5% 94.2%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.54 40.0 2.93e-01 80.0% 75.4%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.54 46.0 3.28e-01 100.0% 67.0%
4bhrA00 3.30.1300.70 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.54 36.0 3.65e-01 75.0% 67.9%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 37.0 3.27e-01 72.5% 90.9%
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 40.0 2.77e-01 81.2% 43.5%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 42.0 3.01e-01 87.5% 87.9%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.52 39.0 2.55e-01 77.5% 45.6%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 42.0 2.96e-01 87.5% 87.8%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.52 40.0 4.00e-01 82.5% 85.7%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.52 45.0 3.72e-01 100.0% 68.6%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 47.0 4.00e-01 100.0% 67.7%
2dmwA01 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.52 44.0 3.98e-01 100.0% 94.8%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.52 40.0 3.45e-01 88.7% 90.0%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.51 44.0 3.71e-01 100.0% 60.8%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 46.0 3.71e-01 97.5% 57.0%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 36.0 3.31e-01 72.5% 72.4%
1x7dB01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.50 45.0 3.47e-01 97.5% 50.3%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3984944 213.2.1.0 a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy 0.74 54.0 5.30e-01 92.5% 71.8%
5071985 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 54.0 4.15e-01 80.0% 37.3%
3587070 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 43.0 3.57e-01 100.0% 36.6%
3550970 719.1.1.5 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.66 51.0 4.56e-01 100.0% 60.0%
4544568 719.1.1.5 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.65 51.0 4.55e-01 100.0% 60.0%
4928736 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.65 48.0 4.04e-01 78.8% 46.4%
3232904 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.63 52.0 3.73e-01 100.0% 31.6%
5014159 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.63 51.0 4.36e-01 91.3% 55.2%
3743364 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.63 53.0 4.53e-01 91.3% 79.2%
3788040 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.62 51.0 4.43e-01 87.5% 86.7%
3743299 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.62 53.0 4.73e-01 91.3% 87.3%
4285199 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.62 45.0 4.31e-01 78.8% 69.5%
5034929 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.61 51.0 3.74e-01 91.3% 54.2%
3690104 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.61 51.0 4.10e-01 90.0% 81.3%
3241959 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.61 52.0 4.61e-01 93.8% 85.2%
3640483 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 51.0 3.60e-01 90.0% 41.7%
3972580 331.1.1.3 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AlkA_N 0.61 41.0 4.18e-01 71.2% 71.2%
4027723 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.60 37.0 3.92e-01 100.0% 70.0%
3817626 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.60 45.0 3.52e-01 81.2% 77.2%
3344424 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 45.0 2.94e-01 78.8% 22.3%
3536447 4026.1.1.1 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.59 50.0 4.09e-01 91.3% 82.8%
4578621 2484.1.1.12 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.59 53.0 3.84e-01 100.0% 69.1%
4942828 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.58 42.0 3.26e-01 75.0% 76.8%
5070684 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.58 48.0 3.53e-01 88.7% 62.5%
3719460 101.1.12.0 alpha arrays › HTH › HTH › HTH motif inserted in other structures 0.58 43.0 3.70e-01 100.0% 49.2%
3364063 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.57 43.0 3.66e-01 82.5% 89.3%
4029094 3257.1.1.0 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain 0.57 48.0 3.71e-01 97.5% 84.0%
3256023 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.57 47.0 3.97e-01 90.0% 85.9%
3867103 3417.1.1.1 a+b three layers › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › BRICHOS 0.57 38.0 3.53e-01 80.0% 52.4%
4221174 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.57 42.0 4.00e-01 78.8% 100.0%
4943404 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.57 37.0 3.16e-01 100.0% 41.5%
4408461 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.56 52.0 3.90e-01 100.0% 71.6%
5059102 241.1.1.30 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 0.56 48.0 3.91e-01 93.8% 65.5%
5063996 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.55 49.0 3.55e-01 98.8% 63.6%
3988729 4097.1.1.0 a+b two layers › Lp2179-like › Lp2179-like › Lp2179-like 0.55 47.0 4.49e-01 95.0% 80.0%
3236988 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.55 37.0 3.78e-01 71.2% 72.5%
5035184 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.55 44.0 3.34e-01 91.3% 52.1%
3261967 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 44.0 3.22e-01 88.7% 71.1%
None 0.54 48.0 3.13e-01 100.0% 51.1%
4029464 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 46.0 3.74e-01 90.0% 71.4%
3970514 11.1.1.1065 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF25971 0.54 43.0 3.99e-01 86.3% 94.0%
4573440 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.54 46.0 3.07e-01 100.0% 50.0%
4879580 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.53 48.0 3.85e-01 100.0% 75.8%
3241305 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.53 41.0 3.53e-01 88.7% 91.4%
3394711 4026.1.1.1 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.52 44.0 3.57e-01 95.0% 73.8%
3879684 223.2.1.46 a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, FNIP_M 0.52 45.0 3.66e-01 100.0% 84.2%
4028683 3504.3.1.0 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain 0.52 45.0 3.54e-01 100.0% 75.0%
4447489 2004.1.1.567 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23 0.51 44.0 2.95e-01 100.0% 52.1%
3734952 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.51 42.0 3.30e-01 92.5% 77.3%
3802876 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 46.0 3.09e-01 100.0% 84.4%
4059006 9.9.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB 0.51 47.0 4.01e-01 100.0% 83.2%
4442508 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 43.0 2.91e-01 100.0% 50.4%
3492787 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.51 45.0 3.51e-01 100.0% 52.8%
3541065 5.1.4.13 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.51 44.0 2.80e-01 100.0% 55.0%
1196318 5.1.3.5 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.51 42.0 2.76e-01 97.5% 86.1%
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.51 41.0 4.11e-01 92.5% 97.6%
4599356 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.50 40.0 2.62e-01 86.3% 66.8%
4432376 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.50 46.0 2.96e-01 100.0% 91.8%
3585833 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.50 37.0 3.43e-01 81.2% 76.4%
4459527 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.50 46.0 2.95e-01 100.0% 83.8%