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OM287554.1__ULG00580.1__vBAmaSR9Y1_4__00004

Bact-Vir

OM287554.1__ULG00580.1__vBAmaSR9Y1_4__00004

Identity

Accession:
OM287554 ↗
Kingdom:
phage

Quality

69.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-75
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.76 51.0 4.72e-01 74.2% 56.1%
1ni9A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.71 51.0 3.90e-01 77.3% 39.1%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.68 50.0 5.35e-01 77.3% 92.9%
7knlA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.67 56.0 4.70e-01 93.9% 65.8%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.65 48.0 3.61e-01 78.8% 34.3%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 56.0 4.29e-01 98.5% 81.5%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.65 47.0 4.38e-01 78.8% 62.1%
6p2lA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 48.0 2.99e-01 78.8% 34.6%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 49.0 4.01e-01 80.3% 79.0%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 47.0 3.36e-01 77.3% 50.3%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.65 57.0 4.50e-01 100.0% 52.9%
3esiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 53.0 4.35e-01 93.9% 91.1%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 46.0 3.78e-01 78.8% 46.3%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.62 44.0 4.09e-01 74.2% 61.9%
1srqA01 3.30.1120.160 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.62 45.0 3.61e-01 78.8% 37.7%
3ewaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 45.0 3.03e-01 77.3% 85.1%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.61 48.0 3.71e-01 84.8% 83.3%
5tf2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 44.0 2.86e-01 78.8% 17.2%
5flwA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 45.0 2.97e-01 80.3% 18.2%
2l3tA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 45.0 4.02e-01 83.3% 64.0%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 45.0 2.94e-01 81.8% 18.6%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.60 44.0 2.87e-01 80.3% 76.1%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.59 42.0 4.35e-01 77.3% 88.1%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.58 50.0 4.19e-01 97.0% 57.3%
1buqA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.49e-01 80.3% 46.4%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 3.96e-01 97.0% 50.8%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 39.0 4.06e-01 72.7% 82.5%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 39.0 3.84e-01 80.3% 69.0%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 47.0 3.75e-01 100.0% 66.2%
3kh8B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 47.0 3.63e-01 95.5% 98.7%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 42.0 2.67e-01 83.3% 30.1%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.56 47.0 3.76e-01 97.0% 73.0%
2oap101 3.30.450.380 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 45.0 3.23e-01 92.4% 60.4%
1fuwA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 44.0 3.99e-01 87.9% 90.1%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 45.0 3.58e-01 95.5% 86.1%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 3.96e-01 72.7% 82.3%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 2.76e-01 92.4% 59.8%
8b4hA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 40.0 3.11e-01 81.8% 87.7%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 42.0 4.14e-01 92.4% 79.7%
2g2sA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.53 41.0 4.16e-01 84.8% 87.5%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.77e-01 72.7% 81.0%
6etzA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.24e-01 100.0% 90.5%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.53 38.0 4.04e-01 84.8% 94.7%
4e19A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 45.0 3.64e-01 100.0% 74.4%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.38e-01 92.4% 47.4%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 43.0 3.50e-01 97.0% 49.2%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 45.0 4.08e-01 98.5% 87.8%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.51 39.0 3.97e-01 87.9% 87.7%
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.50 44.0 3.55e-01 98.5% 54.7%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4827588 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.73 52.0 3.81e-01 78.8% 29.3%
3917054 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.72 52.0 4.23e-01 77.3% 44.8%
3730272 301.7.1.0 a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.71 52.0 4.04e-01 77.3% 99.3%
3819875 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.71 51.0 3.26e-01 78.8% 15.5%
1887056 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.70 52.0 4.25e-01 78.8% 45.8%
6689 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.70 52.0 4.18e-01 78.8% 50.0%
4953226 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.70 49.0 4.93e-01 72.7% 75.4%
3258590 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.69 50.0 4.47e-01 78.8% 53.7%
3725129 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.69 59.0 4.53e-01 97.0% 42.6%
1569520 2003.1.5.151 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.69 50.0 3.37e-01 77.3% 21.5%
4968514 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.68 60.0 4.90e-01 100.0% 53.6%
3243080 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.68 57.0 4.99e-01 92.4% 65.0%
3833907 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.68 50.0 3.84e-01 78.8% 93.3%
3618524 216.1.1.26 a+b two layers › UBC-like › UBC-like › UBC-like › FmiP_Thoc5 0.68 59.0 4.33e-01 100.0% 82.2%
4416182 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.68 50.0 4.28e-01 78.8% 81.9%
4666811 243.3.1.51 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › HalC8_like_N 0.67 55.0 4.28e-01 90.9% 63.4%
3947165 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.66 57.0 4.40e-01 97.0% 68.7%
4977909 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.66 57.0 4.91e-01 100.0% 62.7%
3421545 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.65 50.0 3.11e-01 83.3% 26.6%
2322283 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 47.0 3.63e-01 78.8% 48.7%
4159356 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.63 55.0 3.43e-01 100.0% 37.2%
3718216 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.62 54.0 4.44e-01 98.5% 58.4%
1115776 295.1.1.5 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Whirly 0.62 52.0 3.75e-01 90.9% 47.8%
4959370 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.61 54.0 4.04e-01 100.0% 48.8%
3610069 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.61 48.0 3.32e-01 84.8% 30.7%
3959925 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 46.0 4.04e-01 81.8% 64.0%
3258675 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.61 45.0 3.54e-01 78.8% 39.3%
1720774 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.61 45.0 2.97e-01 80.3% 18.2%
4977172 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 51.0 4.13e-01 97.0% 83.1%
3827309 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.60 51.0 4.68e-01 100.0% 83.3%
5028155 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 50.0 3.96e-01 100.0% 85.8%
3987123 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.59 44.0 3.97e-01 78.8% 58.9%
3629205 5.1.4.147 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N 0.59 47.0 2.95e-01 86.4% 22.2%
4014854 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.59 43.0 2.82e-01 78.8% 17.4%
5049570 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.59 42.0 3.00e-01 78.8% 23.5%
3794870 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.58 51.0 3.90e-01 100.0% 50.0%
5034702 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 46.0 3.56e-01 100.0% 38.3%
4974736 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 49.0 3.89e-01 100.0% 86.9%
4981911 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.57 41.0 2.82e-01 77.3% 21.3%
3273247 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.57 49.0 3.86e-01 100.0% 85.3%
3879896 11.1.1.1218 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3, Kelch_1, Kelch_HCF 0.57 46.0 2.83e-01 92.4% 56.8%
4941093 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.56 47.0 3.75e-01 100.0% 86.0%
3931594 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 44.0 4.05e-01 90.9% 71.1%
3257844 71.1.1.16 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.55 48.0 3.44e-01 100.0% 80.0%
2321284 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 47.0 3.96e-01 97.0% 87.7%
3646441 2484.1.1.205 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27035 0.55 43.0 3.62e-01 84.8% 84.5%
4771028 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.53 41.0 4.19e-01 84.8% 88.9%
3593905 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.53 43.0 3.28e-01 100.0% 46.7%
3816322 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 44.0 2.89e-01 97.0% 41.2%
4797813 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.53 38.0 4.04e-01 84.8% 94.7%
5032655 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.23e-01 100.0% 55.0%