←Back to structures

OM293957.1__UOK17475.1__vBBaMIFTN8_10__00010

Bact-Vir

OM293957.1__UOK17475.1__vBBaMIFTN8_10__00010

Identity

Accession:
OM293957 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bordetella_phage_vB_BaM-IFTN8

TaxID: 2928724

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-85
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3anwA02 3.40.5.50 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.71 43.0 4.99e-01 86.9% 87.9%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 38.0 3.65e-01 86.9% 52.5%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.59 46.0 4.15e-01 88.1% 60.7%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 36.0 3.64e-01 86.9% 59.1%
3es1A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 36.0 3.22e-01 86.9% 42.1%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.57 45.0 3.99e-01 85.7% 79.2%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.56 42.0 3.61e-01 88.1% 48.6%
2asyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 42.0 4.02e-01 88.1% 83.2%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 38.0 3.15e-01 86.9% 40.0%
2cg8B02 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.53 45.0 3.97e-01 96.4% 80.3%
1vw4U00 3.30.1390.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 0.53 41.0 4.18e-01 94.0% 85.4%
6uf3A00 3.40.630.190 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein 0.51 45.0 3.23e-01 100.0% 42.1%
1r9wA00 3.40.1310.10 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.50 40.0 3.46e-01 89.3% 60.1%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 38.0 3.53e-01 83.3% 77.7%
4asmB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 38.0 2.64e-01 86.9% 62.5%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3977412 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.72 42.0 5.22e-01 83.3% 100.0%
4973337 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.64 39.0 4.54e-01 88.1% 92.7%
4032092 206.1.1.16 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › IucA_IucC,FhuF 0.60 51.0 3.15e-01 88.1% 18.8%
4494622 206.1.1.16 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › IucA_IucC,FhuF 0.60 51.0 3.17e-01 89.3% 19.2%
3056284 304.51.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.60 48.0 4.70e-01 89.3% 96.8%
4248174 206.1.1.16 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › IucA_IucC,FhuF 0.60 51.0 3.13e-01 88.1% 20.0%
4883269 304.51.1.5 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Csy4 0.60 47.0 4.61e-01 89.3% 95.8%
3265780 3529.1.1.1 ↗ beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault 0.60 35.0 3.91e-01 86.9% 78.3%
4501303 206.1.1.16 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › IucA_IucC,FhuF 0.59 50.0 3.05e-01 88.1% 18.0%
3969466 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.59 37.0 3.32e-01 86.9% 43.3%
1842251 206.1.1.16 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › IucA_IucC,FhuF 0.59 49.0 3.04e-01 88.1% 18.3%
3523136 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.57 40.0 2.79e-01 75.0% 45.6%
4982789 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.57 34.0 3.68e-01 83.3% 70.8%
3461676 10.32.1.212 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GUB_WAK_bind 0.57 45.0 3.46e-01 86.9% 46.5%
4878841 5077.1.1.2 ↗ extended segments › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › PsaD 0.56 40.0 3.51e-01 86.9% 48.5%
4157339 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 42.0 3.74e-01 85.7% 58.3%
3581887 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.54 22.0 3.17e-01 83.3% 80.0%
3218324 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.53 24.0 3.14e-01 96.4% 82.5%
3870665 10.32.1.233 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_Hemicentin 0.52 41.0 3.93e-01 86.9% 72.0%
3918340 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 36.0 3.92e-01 89.3% 87.1%