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OM362897.1__UKM17347.1__X__00238
Bact-VirOM362897.1__UKM17347.1__X__00238
Identity
- Accession:
- OM362897 ↗
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Taxonomy
TaxID: 2914441
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 59-113
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oj5B01 | 3.30.2020.50 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.94 | 78.0 | 6.63e-01 | 87.3% | 59.8% |
| 4ywoA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 52.0 | 4.03e-01 | 78.2% | 94.9% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 52.0 | 3.21e-01 | 83.6% | 23.1% |
| 4eqsA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 48.0 | 3.55e-01 | 78.2% | 79.0% |
| 2xu8A00 | 3.90.70.190 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) | 0.58 | 42.0 | 3.27e-01 | 76.4% | 79.3% |
| 3i4jB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 39.0 | 2.96e-01 | 76.4% | 77.4% |
| 4q6jB00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.53 | 39.0 | 2.54e-01 | 78.2% | 92.7% |
| 3t0qA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.53 | 38.0 | 2.39e-01 | 76.4% | 16.1% |
| 7x4nE01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 45.0 | 2.81e-01 | 100.0% | 98.1% |
| 1ueyA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.00e-01 | 80.0% | 68.5% |
| 1azwA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 43.0 | 2.75e-01 | 98.2% | 26.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5011781 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.68 | 47.0 | 2.94e-01 | 72.7% | 33.3% |
| 4951102 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.56 | 48.0 | 3.01e-01 | 100.0% | 83.8% |
| 4008035 | 223.1.1.112 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30417 | 0.56 | 48.0 | 3.04e-01 | 96.4% | 37.1% |
| 4205751 | 2003.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Gp_dh_N | 0.56 | 40.0 | 2.85e-01 | 80.0% | 60.5% |
| 4959884 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.53 | 39.0 | 3.93e-01 | 81.8% | 76.4% |
| 3445173 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 34.0 | 3.28e-01 | 94.5% | 56.9% |
| 4532621 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.52 | 41.0 | 2.54e-01 | 87.3% | 78.2% |
| 4122696 | 131.2.1.5 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › HD, PF27444 | 0.52 | 35.0 | 2.26e-01 | 70.9% | 23.1% |
| 4498125 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.52 | 43.0 | 3.29e-01 | 92.7% | 72.3% |
| 1522 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 37.0 | 3.00e-01 | 80.0% | 68.5% |
| 4159601 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.51 | 45.0 | 2.65e-01 | 100.0% | 89.8% |
| 4663859 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.51 | 38.0 | 2.40e-01 | 87.3% | 39.7% |
D2
medium
residues 1-51
Domain cluster:
rep: M14784.1__AAA92524.1__X__00002__D6-47
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10746.14 best | Phage_holin_2_2 | 71.9 | 3.90e-20 | 94.1% | 78.7% |