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OM373202.1__UKM31203.1__CrLKS3_g21__00021

Bact-Vir

OM373202.1__UKM31203.1__CrLKS3_g21__00021

Identity

Accession:
OM373202 ↗
Kingdom:
phage

Quality

89.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-107
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.78 60.0 4.93e-01 100.0% 46.9%
3cddA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.74 61.0 4.94e-01 100.0% 48.4%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.74 51.0 5.04e-01 100.0% 66.7%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.70 46.0 4.91e-01 96.1% 78.2%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.70 44.0 5.00e-01 93.2% 86.7%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.67 43.0 3.65e-01 94.2% 40.0%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.66 51.0 4.28e-01 97.1% 48.3%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.65 37.0 4.19e-01 100.0% 74.7%
4feuF01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 39.0 4.55e-01 87.4% 84.9%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.65 37.0 3.87e-01 74.8% 59.4%
2kvoA01 2.40.30.220 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 0.63 47.0 4.74e-01 100.0% 78.8%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 42.0 4.39e-01 100.0% 77.2%
1nbeB01 3.30.70.140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain 0.61 39.0 4.13e-01 95.1% 71.0%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.61 37.0 3.87e-01 90.3% 65.2%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 56.0 4.85e-01 100.0% 72.3%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 56.0 4.77e-01 100.0% 72.7%
2qckA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 56.0 4.85e-01 100.0% 74.2%
4myjA05 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 40.0 4.27e-01 88.3% 79.5%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 55.0 4.75e-01 100.0% 73.1%
5choF00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 54.0 4.60e-01 100.0% 73.1%
4h05B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 38.0 4.00e-01 88.3% 73.6%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 53.0 4.71e-01 100.0% 70.5%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 42.0 2.98e-01 89.3% 25.0%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 53.0 4.42e-01 100.0% 64.6%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 53.0 4.65e-01 100.0% 73.0%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 53.0 4.34e-01 100.0% 62.9%
8ct0B01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 53.0 4.51e-01 100.0% 69.9%
5iqaA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 37.0 3.97e-01 89.3% 74.4%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.58 37.0 3.76e-01 90.3% 63.5%
6k2lA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 43.0 4.21e-01 93.2% 72.1%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 52.0 4.50e-01 100.0% 73.3%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 53.0 4.35e-01 100.0% 63.1%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 52.0 4.45e-01 100.0% 71.3%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 34.0 3.52e-01 100.0% 60.8%
2acxA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 39.0 4.11e-01 89.3% 79.1%
1vf7F01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.57 43.0 4.41e-01 92.2% 82.4%
2wtkC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 39.0 4.17e-01 100.0% 82.0%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 38.0 4.13e-01 89.3% 81.6%
4c0tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 40.0 4.17e-01 100.0% 81.5%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 52.0 4.55e-01 100.0% 73.8%
4crsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 39.0 3.65e-01 88.3% 56.0%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 39.0 3.97e-01 90.3% 71.4%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 40.0 4.01e-01 100.0% 73.3%
3ko2A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 41.0 3.52e-01 94.2% 50.9%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 37.0 3.32e-01 94.2% 50.3%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.53 35.0 3.48e-01 89.3% 63.3%
1e62A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 40.0 3.76e-01 94.2% 68.8%
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 36.0 3.30e-01 95.1% 54.6%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 39.0 2.58e-01 83.5% 52.7%
4bxiA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.50 46.0 4.06e-01 100.0% 84.9%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.50 29.0 3.52e-01 93.2% 92.1%
1ow1A00 2.40.290.10 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › 0.50 45.0 3.85e-01 100.0% 88.0%
3cr8A01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.50 44.0 4.01e-01 98.1% 73.8%
2vtfA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 41.0 3.53e-01 92.2% 84.7%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5041372 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 63.0 6.73e-01 100.0% 93.3%
3949305 1.1.13.54 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_L 0.79 73.0 6.46e-01 100.0% 91.7%
4141852 1.1.13.56 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ 0.79 60.0 6.56e-01 100.0% 96.5%
3964308 1.1.13.37 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2163 0.79 73.0 6.60e-01 100.0% 89.6%
3504737 1.1.13.54 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_L 0.79 72.0 6.47e-01 100.0% 93.6%
184471 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.78 60.0 6.49e-01 100.0% 95.3%
4602833 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.78 72.0 6.50e-01 100.0% 88.9%
4988103 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 63.0 6.61e-01 100.0% 93.7%
4500974 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.77 54.0 5.16e-01 100.0% 62.5%
4957565 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 70.0 6.53e-01 100.0% 95.2%
3977382 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 63.0 6.57e-01 100.0% 96.8%
1178487 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.74 61.0 6.36e-01 100.0% 92.7%
5081561 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 53.0 5.93e-01 100.0% 97.5%
4033712 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 57.0 6.26e-01 99.0% 100.0%
4031285 1.1.13.64 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal 0.72 57.0 6.03e-01 100.0% 95.6%
192 1.1.9.13 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF2584 0.70 44.0 4.90e-01 93.2% 82.3%
5017568 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.68 39.0 4.34e-01 90.3% 72.5%
4285594 1.1.12.1 beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.67 44.0 4.15e-01 100.0% 54.4%
3224730 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 52.0 5.11e-01 94.2% 79.1%
4952629 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 54.0 5.53e-01 100.0% 93.0%
4980898 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 44.0 4.51e-01 92.2% 72.0%
3688711 1.1.7.81 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel 0.65 50.0 4.96e-01 96.1% 77.3%
3227251 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 49.0 4.80e-01 81.6% 83.5%
4029423 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.64 45.0 3.91e-01 71.8% 79.3%
4961473 304.165.1.2 a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT 0.64 43.0 3.83e-01 100.0% 48.3%
4952429 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.63 53.0 5.45e-01 100.0% 94.0%
4952430 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.63 53.0 5.23e-01 100.0% 85.5%
3187444 1.1.7.81 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel 0.63 51.0 4.95e-01 96.1% 77.4%
3462522 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 38.0 3.55e-01 71.8% 48.8%
4986894 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.62 36.0 4.53e-01 82.5% 98.3%
4373808 1.11.1.1 beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 0.62 47.0 4.65e-01 100.0% 76.4%
3341034 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.60 37.0 3.65e-01 87.4% 57.3%
5009717 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 43.0 3.90e-01 84.5% 55.0%
4020238 1.1.7.4 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.60 48.0 4.28e-01 87.4% 66.0%
3723056 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 47.0 4.07e-01 86.4% 56.5%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.60 41.0 4.36e-01 95.1% 81.1%
5024522 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 52.0 4.47e-01 98.1% 78.8%
4200948 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.58 38.0 3.87e-01 98.1% 69.0%
3261993 11.1.1.843 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.57 40.0 3.92e-01 72.8% 65.2%
3596497 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 37.0 3.39e-01 74.8% 49.6%
3502019 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 41.0 2.95e-01 89.3% 25.1%
3395447 220.1.1.162 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31014 0.56 43.0 3.69e-01 100.0% 51.9%
3969448 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.56 50.0 4.99e-01 98.1% 98.1%
3670941 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.55 39.0 2.78e-01 88.3% 22.9%
3600153 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 45.0 3.08e-01 88.3% 34.1%
3831748 60.1.1.0 beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain 0.55 49.0 4.51e-01 100.0% 82.2%
4509301 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.53 39.0 3.40e-01 96.1% 50.0%
2411782 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.53 37.0 3.32e-01 75.7% 51.4%
3425254 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 36.0 3.37e-01 71.8% 83.7%
3952435 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.52 46.0 3.86e-01 99.0% 69.7%
3787819 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 42.0 4.20e-01 88.3% 97.1%
3648911 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 35.0 2.86e-01 89.3% 35.5%
3987502 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.51 39.0 3.33e-01 82.5% 61.1%
3664617 2.1.1.223 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.51 28.0 3.15e-01 94.2% 68.2%
3491959 60.1.1.0 beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain 0.51 45.0 3.92e-01 100.0% 71.2%
3594805 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.78e-01 94.2% 80.0%
5043613 1.1.9.23 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.50 42.0 3.97e-01 96.1% 75.2%
3178011 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.50 37.0 3.42e-01 79.6% 75.7%