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OM418627.1__UNA07251.1__CPT_lambdah434imm21_006__00006
Bact-VirOM418627.1__UNA07251.1__CPT_lambdah434imm21_006__00006
Identity
- Accession:
- OM418627 ↗
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Taxonomy
TaxID: 2918896
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 141-195
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.64 | 50.0 | 3.91e-01 | 87.3% | 43.5% |
| 2qz4A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 48.0 | 4.56e-01 | 85.5% | 79.7% |
| 1tiqB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 45.0 | 3.29e-01 | 90.9% | 85.7% |
| 4bxoB02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.55 | 43.0 | 4.13e-01 | 89.1% | 76.9% |
| 3eoqB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 44.0 | 3.09e-01 | 92.7% | 35.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3995460 | 3542.1.1.1 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin | 0.71 | 49.0 | 3.39e-01 | 74.5% | 23.1% |
| 4260430 | 191.1.1.18 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_14 | 0.68 | 50.0 | 3.65e-01 | 80.0% | 31.3% |
| 4038171 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.66 | 57.0 | 4.85e-01 | 98.2% | 90.0% |
| 3268149 | 2004.5.1.11 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › SPA | 0.66 | 47.0 | 3.26e-01 | 76.4% | 83.9% |
| None | — | 0.65 | 54.0 | 3.34e-01 | 94.5% | 34.0% | |
| 4373985 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 47.0 | 4.19e-01 | 83.6% | 65.9% |
| 3466081 | 148.1.3.205 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_At3g28540 | 0.63 | 45.0 | 4.33e-01 | 78.2% | 78.5% |
| 3972303 | 103.16.1.0 ↗ | alpha arrays › RuvA-C › C-P lyase subunit PhnI N-terminal domain › C-P lyase subunit PhnI N-terminal domain | 0.62 | 46.0 | 4.01e-01 | 80.0% | 57.6% |
| 3607513 | 7529.1.1.4 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PARG_cat_C | 0.62 | 47.0 | 3.06e-01 | 85.5% | 47.0% |
| 3623745 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.61 | 46.0 | 4.16e-01 | 81.8% | 81.3% |
| 4158788 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.59 | 44.0 | 4.10e-01 | 87.3% | 100.0% |
D2
medium
residues 23-95
Domain cluster:
rep: OQ790078.1__WJE88268.1__X__00008__D1-60
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01343.24 best | Peptidase_S49 | 57.5 | 2.20e-15 | 98.6% | 46.1% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ekoI01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 60.0 | 4.28e-01 | 87.7% | 29.3% |
| 4jcqA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.74 | 55.0 | 4.21e-01 | 80.8% | 35.3% |
| 7o49B01 | 3.30.70.2110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 39.0 | 3.64e-01 | 78.1% | 49.5% |
| 1rp5A03 | 3.30.70.2110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 40.0 | 3.71e-01 | 76.7% | 52.2% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 42.0 | 4.02e-01 | 72.6% | 63.0% |
| 4fvmA04 | 6.10.10.100 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.61 | 32.0 | 4.04e-01 | 78.1% | 84.8% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 41.0 | 3.91e-01 | 71.2% | 98.9% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 44.0 | 3.54e-01 | 79.5% | 73.6% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 42.0 | 3.14e-01 | 83.6% | 78.6% |
| 2c35A00 | 1.20.1250.40 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit | 0.51 | 35.0 | 3.00e-01 | 71.2% | 65.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3979334 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.90 | 83.0 | 5.54e-01 | 97.3% | 30.0% |
| 3959324 | 327.13.1.17 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › Peptidase_S49 | 0.89 | 81.0 | 6.83e-01 | 97.3% | 61.7% |
| 3791475 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.77 | 58.0 | 4.43e-01 | 82.2% | 36.3% |
| 4023841 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.75 | 56.0 | 4.02e-01 | 87.7% | 30.0% |
| 4985449 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.73 | 52.0 | 4.94e-01 | 89.0% | 63.5% |
| 3496016 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.69 | 48.0 | 4.12e-01 | 72.6% | 87.8% |
| 3582407 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.67 | 44.0 | 4.56e-01 | 71.2% | 71.4% |
| 3613914 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.66 | 37.0 | 3.73e-01 | 100.0% | 54.7% |
| 4032135 | 632.2.1.39 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF4355 | 0.64 | 47.0 | 4.58e-01 | 76.7% | 77.5% |
| 4038003 | 632.2.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GA-like | 0.63 | 45.0 | 4.47e-01 | 74.0% | 81.3% |
| 4970524 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.63 | 43.0 | 3.78e-01 | 71.2% | 69.1% |
| 5031082 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.63 | 43.0 | 3.75e-01 | 71.2% | 69.1% |
| 5007716 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.51 | 32.0 | 3.26e-01 | 76.7% | 64.3% |
| 3546741 | 101.1.1.96 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Neugrin | 0.51 | 40.0 | 3.56e-01 | 84.9% | 61.0% |
| 4022186 | 101.1.4.58 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF7726 | 0.50 | 31.0 | 3.38e-01 | 76.7% | 76.7% |