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OM418631.1__UNY42245.1__UFJFPfDIW6_00037__00037

Bact-Vir

OM418631.1__UNY42245.1__UFJFPfDIW6_00037__00037

Identity

Accession:
OM418631 ↗
Kingdom:
phage

Quality

83.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-52
PDB
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.51e-01 79.2% 88.7%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 4.65e-01 95.8% 80.2%
5owvD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 50.0 3.27e-01 89.6% 23.4%
1hx6B01 2.70.9.30 Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 0.63 52.0 3.46e-01 100.0% 80.7%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.63 39.0 3.61e-01 70.8% 45.5%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 43.0 3.03e-01 75.0% 60.1%
4j25F00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.61 52.0 3.57e-01 100.0% 45.5%
2j1vA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 3.76e-01 100.0% 90.8%
2yvsA01 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.60 50.0 3.93e-01 100.0% 82.5%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 43.0 3.22e-01 79.2% 46.1%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 51.0 4.05e-01 100.0% 47.1%
3mb5A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.60 43.0 4.02e-01 79.2% 96.8%
3a5vA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 49.0 4.01e-01 100.0% 71.7%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 48.0 3.67e-01 100.0% 66.4%
1o5uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 50.0 4.19e-01 100.0% 54.5%
7wdtA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 49.0 3.57e-01 100.0% 63.3%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 49.0 3.85e-01 100.0% 65.2%
2d93A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 47.0 3.60e-01 100.0% 41.0%
1wp5A00 2.120.10.90 Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal 0.58 48.0 2.97e-01 95.8% 28.0%
2dlgA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 3.82e-01 87.5% 77.5%
3bn6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 47.0 3.43e-01 100.0% 94.3%
4nlcA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 39.0 2.50e-01 72.9% 91.6%
5eb9A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 3.71e-01 100.0% 81.2%
3pm9A02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.57 47.0 3.65e-01 100.0% 81.1%
5xctB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 3.69e-01 100.0% 74.1%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.57 46.0 3.66e-01 100.0% 93.2%
6vtmB00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 47.0 3.91e-01 100.0% 91.7%
5l0qB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 46.0 3.73e-01 100.0% 76.9%
5ccbA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.57 40.0 3.63e-01 79.2% 88.9%
2vm9A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 46.0 3.42e-01 100.0% 93.5%
1neuA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 45.0 3.63e-01 100.0% 80.0%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 45.0 3.43e-01 100.0% 79.0%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.56 46.0 4.00e-01 100.0% 97.6%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.56 42.0 3.80e-01 87.5% 98.6%
1t9mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 38.0 2.61e-01 72.9% 57.4%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 46.0 4.03e-01 100.0% 78.8%
4a42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 45.0 3.49e-01 100.0% 78.7%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 43.0 3.58e-01 100.0% 89.6%
1yn3A00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 45.0 3.75e-01 100.0% 91.8%
2aegA02 3.90.1680.20 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › 0.55 40.0 2.86e-01 79.2% 39.0%
6ixwB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 42.0 2.98e-01 87.5% 84.0%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 44.0 3.81e-01 100.0% 80.7%
2vdrB02 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.54 45.0 3.30e-01 100.0% 34.6%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 44.0 3.28e-01 100.0% 95.3%
2iciA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 43.0 3.10e-01 91.7% 79.9%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.53 43.0 3.35e-01 95.8% 74.1%
3w42A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.53 41.0 2.87e-01 93.8% 73.9%
1oeyL00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 41.0 3.53e-01 100.0% 83.7%
1vwxB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 42.0 3.04e-01 100.0% 72.8%
2bkfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 41.0 3.69e-01 100.0% 90.4%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 36.0 2.59e-01 72.9% 30.8%
1a21A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.53e-01 100.0% 65.3%
4wgkA02 2.60.40.2300 Mainly Beta › Sandwich › Immunoglobulin-like › Neutral/alkaline non-lysosomal ceramidase, C-terminal domain 0.52 40.0 3.16e-01 100.0% 62.4%
4j2gA00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.51 39.0 2.74e-01 93.8% 88.1%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 44.0 3.34e-01 97.9% 80.3%
3l5iA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.63e-01 100.0% 77.3%
2d5mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 37.0 2.64e-01 83.3% 73.8%
1ok0A00 2.60.40.20 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-amylase inhibitor 0.51 40.0 3.67e-01 100.0% 89.2%
1pjuA01 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.51 41.0 3.85e-01 97.9% 79.4%
2xqyA03 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.51 41.0 3.17e-01 100.0% 50.4%
2j4xA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.50 41.0 3.22e-01 100.0% 75.8%
2m2dA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 38.0 3.16e-01 100.0% 74.6%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4953913 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.68 52.0 4.87e-01 85.4% 93.3%
146288 4187.2.1.0 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.67 58.0 5.74e-01 100.0% 92.2%
4321108 4187.2.1.0 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.67 58.0 5.60e-01 100.0% 96.4%
3786412 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.67 50.0 4.23e-01 81.2% 88.7%
3624163 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 53.0 4.30e-01 87.5% 73.3%
5013683 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 52.0 4.84e-01 85.4% 90.0%
3458276 822.1.1.1 a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.66 48.0 4.41e-01 79.2% 67.7%
3574742 4.1.1.47 beta barrels › SH3 › SH3 › SH3 › Gemin6 0.66 52.0 4.27e-01 87.5% 73.3%
4258822 12.3.1.61 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF25837 0.66 54.0 3.49e-01 91.7% 21.8%
3839016 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 55.0 5.05e-01 100.0% 92.3%
4163851 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 55.0 5.17e-01 100.0% 98.3%
3567640 4187.2.1.0 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.64 53.0 5.34e-01 100.0% 96.0%
5030770 821.1.1.0 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.63 52.0 4.31e-01 100.0% 68.4%
4280097 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 54.0 5.10e-01 100.0% 93.3%
4424312 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.60 48.0 3.57e-01 100.0% 96.8%
3738766 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.59 48.0 3.57e-01 100.0% 89.7%
4500385 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.58 48.0 3.60e-01 100.0% 95.0%
4215906 3578.1.1.1 beta sandwiches › Third domain in metalloprotease StcE › Third domain in metalloprotease StcE › Third domain in metalloprotease StcE › TagA 0.58 45.0 3.55e-01 85.4% 76.2%
4952487 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 39.0 4.03e-01 70.8% 77.8%
3742118 11.1.1.161 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII 0.58 47.0 3.69e-01 100.0% 95.8%
2330594 10.32.1.80 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM30 0.58 48.0 3.38e-01 100.0% 50.8%
3924068 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.58 48.0 3.65e-01 100.0% 88.5%
3538609 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.58 47.0 3.51e-01 100.0% 87.6%
3267164 11.1.1.793 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.57 45.0 3.57e-01 87.5% 62.9%
3933682 822.1.1.0 a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain 0.57 48.0 3.72e-01 100.0% 50.4%
3549615 10.32.1.221 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25900 0.57 48.0 3.38e-01 100.0% 41.8%
3196947 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 46.0 2.63e-01 100.0% 12.8%
5082908 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 47.0 3.78e-01 100.0% 93.5%
3547080 11.1.1.1346 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NFAM1 0.56 46.0 3.45e-01 100.0% 60.7%
3788140 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.55 46.0 3.39e-01 100.0% 46.2%
4243030 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.55 44.0 2.90e-01 95.8% 61.3%
3753826 11.1.1.396 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig 0.55 45.0 3.72e-01 93.8% 77.8%
4027080 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.55 43.0 3.26e-01 91.7% 50.4%
3908804 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 3.63e-01 100.0% 52.4%
3341432 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.53 43.0 3.24e-01 100.0% 47.6%
3265117 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 3.14e-01 87.5% 63.5%
3996582 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.53 45.0 3.35e-01 100.0% 63.7%
3576125 10.32.1.28 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC 0.52 44.0 2.98e-01 100.0% 73.5%
4002865 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.52 44.0 3.27e-01 100.0% 60.0%
3469360 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.52 41.0 3.55e-01 89.6% 90.0%
3435055 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.52 42.0 3.25e-01 100.0% 63.8%
3943690 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 38.0 3.70e-01 85.4% 91.4%
3849644 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.52 44.0 3.29e-01 100.0% 64.4%
1014044 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.52 40.0 2.94e-01 100.0% 83.6%
3781122 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.51 44.0 3.04e-01 100.0% 47.8%
3265108 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 37.0 3.11e-01 85.4% 67.0%
5081326 11.1.1.608 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail 0.51 38.0 3.55e-01 89.6% 80.0%
4012961 221.17.1.0 a+b two layers › beta-Grasp › C-terminal wheel domain of Cns1 › C-terminal wheel domain of Cns1 0.50 39.0 2.93e-01 100.0% 53.1%