←Back to structures
OM418631.1__UNY42257.1__UFJFPfDIW6_00049__00049
Bact-VirOM418631.1__UNY42257.1__UFJFPfDIW6_00049__00049
Identity
- Accession:
- OM418631 ↗
- Kingdom:
- phage
Quality
73.2
mean pLDDT
Taxonomy
TaxID: 2927622
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-56
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 52.0 | 4.58e-01 | 76.9% | 48.6% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 53.0 | 4.90e-01 | 78.8% | 56.9% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.77 | 57.0 | 5.33e-01 | 90.4% | 64.1% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.75 | 55.0 | 4.78e-01 | 84.6% | 52.6% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 62.0 | 6.12e-01 | 100.0% | 91.2% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 57.0 | 4.99e-01 | 90.4% | 57.1% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 57.0 | 5.37e-01 | 90.4% | 71.0% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.72 | 56.0 | 5.31e-01 | 90.4% | 71.0% |
| 8b9zK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 62.0 | 5.18e-01 | 100.0% | 58.2% |
| 5ux1D00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 62.0 | 4.19e-01 | 100.0% | 54.8% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.69 | 59.0 | 5.09e-01 | 96.2% | 61.0% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 55.0 | 5.24e-01 | 96.2% | 74.2% |
| 2itbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.69 | 61.0 | 4.08e-01 | 100.0% | 54.5% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 51.0 | 4.51e-01 | 82.7% | 56.2% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 54.0 | 4.80e-01 | 90.4% | 61.6% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.68 | 59.0 | 5.11e-01 | 96.2% | 63.6% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.68 | 59.0 | 4.83e-01 | 100.0% | 54.1% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.67 | 55.0 | 4.87e-01 | 90.4% | 63.0% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 50.0 | 4.90e-01 | 90.4% | 74.1% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 55.0 | 3.60e-01 | 96.2% | 21.6% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 55.0 | 4.70e-01 | 90.4% | 61.7% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 53.0 | 4.57e-01 | 90.4% | 56.8% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.65 | 53.0 | 5.06e-01 | 90.4% | 86.9% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.65 | 56.0 | 4.80e-01 | 98.1% | 61.2% |
| 1avoB00 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.64 | 56.0 | 4.14e-01 | 100.0% | 74.3% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.64 | 57.0 | 4.27e-01 | 98.1% | 44.5% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 57.0 | 4.44e-01 | 100.0% | 73.6% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 52.0 | 4.87e-01 | 98.1% | 72.3% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 58.0 | 5.15e-01 | 100.0% | 80.3% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.63 | 50.0 | 5.16e-01 | 98.1% | 91.8% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.61 | 54.0 | 5.05e-01 | 98.1% | 93.8% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.60 | 52.0 | 5.07e-01 | 98.1% | 89.7% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.59 | 51.0 | 4.47e-01 | 100.0% | 74.1% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.58 | 49.0 | 5.05e-01 | 94.2% | 100.0% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.58 | 50.0 | 4.06e-01 | 100.0% | 51.5% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 48.0 | 4.33e-01 | 98.1% | 70.3% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 48.0 | 4.33e-01 | 100.0% | 68.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4623058 | 5043.1.1.0 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like | 0.92 | 79.0 | 7.25e-01 | 100.0% | 73.8% |
| 4505840 | 3757.1.1.0 ↗ | extended segments › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain | 0.85 | 70.0 | 7.12e-01 | 88.5% | 100.0% |
| 5024109 | 3646.1.1.1 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ | 0.82 | 72.0 | 4.68e-01 | 100.0% | 23.1% |
| 4942761 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.78 | 67.0 | 5.73e-01 | 100.0% | 60.0% |
| 3437690 | 109.4.1.1231 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_NAA35 | 0.77 | 58.0 | 5.95e-01 | 90.4% | 84.0% |
| 3641196 | 5041.1.1.27 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › PRA1 | 0.77 | 65.0 | 5.07e-01 | 96.2% | 49.6% |
| 4978412 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.77 | 60.0 | 4.05e-01 | 90.4% | 24.6% |
| 4146694 | 192.29.1.277 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin | 0.75 | 57.0 | 5.29e-01 | 90.4% | 64.6% |
| 4229778 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.71 | 59.0 | 6.02e-01 | 98.1% | 96.0% |
| 5009792 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.71 | 55.0 | 5.08e-01 | 82.7% | 81.5% |
| 3610706 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.71 | 55.0 | 4.68e-01 | 82.7% | 62.5% |
| 3924041 | 605.1.1.212 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › 2TM_P5A-ATPase | 0.69 | 60.0 | 5.66e-01 | 100.0% | 80.0% |
| 4631780 | 192.7.1.4 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C | 0.68 | 56.0 | 5.37e-01 | 90.4% | 76.7% |
| 3768322 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.67 | 55.0 | 5.09e-01 | 90.4% | 70.8% |
| 4964167 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.66 | 59.0 | 4.33e-01 | 98.1% | 37.8% |
| 3248074 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.66 | 58.0 | 4.05e-01 | 96.2% | 32.3% |
| 3284949 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.65 | 56.0 | 5.11e-01 | 98.1% | 100.0% |
| 3505608 | 192.29.1.1 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom | 0.64 | 56.0 | 4.95e-01 | 96.2% | 66.7% |
| 5018026 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 51.0 | 5.26e-01 | 94.2% | 100.0% |
| 3393826 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.63 | 58.0 | 5.22e-01 | 100.0% | 87.0% |
| 3482907 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.63 | 55.0 | 4.20e-01 | 96.2% | 77.4% |
| 3906813 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.62 | 56.0 | 3.41e-01 | 100.0% | 56.1% |
| 3550353 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.62 | 54.0 | 5.04e-01 | 96.2% | 96.9% |
| 3376917 | 192.24.1.8 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › CDK5RAP3 | 0.62 | 52.0 | 4.54e-01 | 96.2% | 93.8% |
| 3780651 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.62 | 53.0 | 4.95e-01 | 96.2% | 96.9% |
| 4934444 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 54.0 | 4.87e-01 | 98.1% | 72.9% |
| 4805104 | 601.19.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Apolipoprotein | 0.61 | 52.0 | 4.57e-01 | 100.0% | 69.9% |
| 4089827 | 192.1.1.34 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF444 | 0.60 | 52.0 | 4.63e-01 | 98.1% | 70.7% |
| 4762 | 5044.1.1.1 ↗ | extended segments › PsbZ-like › PsbZ-like › PsbZ-like › Ycf9 | 0.59 | 51.0 | 4.82e-01 | 98.1% | 83.9% |
| 2456957 | 192.13.1.1 ↗ | alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 | 0.58 | 50.0 | 4.95e-01 | 100.0% | 98.2% |