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OM456492.1__ULF48428.1__X__00227
Bact-VirOM456492.1__ULF48428.1__X__00227
Identity
- Accession:
- OM456492 ↗
- Kingdom:
- phage
Quality
85.1
mean pLDDT
Taxonomy
TaxID: 2917113
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 258-301
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26125.1 best | AcrVA2-like | 50.8 | 3.70e-13 | 100.0% | 14.6% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7r5mA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.63 | 52.0 | 3.40e-01 | 100.0% | 64.6% |
| 3gw6D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 2.86e-01 | 70.5% | 19.9% |
| 4jphB00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.61 | 41.0 | 3.12e-01 | 70.5% | 79.3% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.60 | 41.0 | 3.09e-01 | 70.5% | 43.2% |
| 4f98A00 | 2.30.140.50 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Protein of unknown function DUF2790 | 0.57 | 39.0 | 3.53e-01 | 70.5% | 51.6% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 38.0 | 2.74e-01 | 100.0% | 22.9% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 39.0 | 2.99e-01 | 79.5% | 64.3% |
| 1orvA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.55 | 40.0 | 2.31e-01 | 79.5% | 20.9% |
| 7wu7501 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 37.0 | 2.72e-01 | 70.5% | 34.9% |
| 2x24A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 39.0 | 2.41e-01 | 79.5% | 13.0% |
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.54 | 45.0 | 3.07e-01 | 100.0% | 76.7% |
| 2wyhA05 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 2.94e-01 | 84.1% | 61.2% |
| 4ckmB00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.54 | 37.0 | 2.66e-01 | 70.5% | 29.2% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 40.0 | 2.97e-01 | 93.2% | 55.9% |
| 3t91B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.54 | 39.0 | 2.59e-01 | 81.8% | 92.7% |
| 1ry6A00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.53 | 36.0 | 2.24e-01 | 70.5% | 91.5% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.53 | 44.0 | 2.93e-01 | 100.0% | 75.4% |
| 2i5tA00 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.53 | 46.0 | 3.09e-01 | 100.0% | 62.7% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.52 | 46.0 | 4.00e-01 | 97.7% | 100.0% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.52 | 42.0 | 3.56e-01 | 90.9% | 93.5% |
| 4nn5C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.34e-01 | 100.0% | 86.9% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 44.0 | 3.01e-01 | 100.0% | 32.3% |
| 7sxqA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 2.78e-01 | 100.0% | 80.6% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.12e-01 | 81.8% | 45.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3397976 | 913.1.1.0 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) | 0.70 | 47.0 | 3.94e-01 | 70.5% | 44.0% |
| 3500186 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 48.0 | 3.77e-01 | 75.0% | 37.0% |
| 3939455 | 385.1.1.2 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › TGF_beta | 0.63 | 42.0 | 3.26e-01 | 70.5% | 92.9% |
| 4225517 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.62 | 51.0 | 3.25e-01 | 97.7% | 18.8% |
| 4932514 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.61 | 42.0 | 3.07e-01 | 72.7% | 43.3% |
| 5030848 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 45.0 | 3.35e-01 | 100.0% | 33.1% |
| 4315296 | 5054.1.1.7 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA | 0.57 | 42.0 | 3.09e-01 | 90.9% | 28.5% |
| 3252786 | 246.2.1.3 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,Metallophos_C | 0.56 | 47.0 | 2.85e-01 | 97.7% | 36.5% |
| 3906518 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 38.0 | 2.75e-01 | 70.5% | 84.4% |
| 5044328 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.54 | 46.0 | 2.92e-01 | 97.7% | 42.2% |
| 4979052 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 43.0 | 3.44e-01 | 90.9% | 52.2% |
| 3505289 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 45.0 | 2.99e-01 | 100.0% | 60.0% |
| 4621143 | 11.1.1.248 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG6 | 0.53 | 41.0 | 3.16e-01 | 93.2% | 77.6% |
| 5016346 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.53 | 42.0 | 3.25e-01 | 100.0% | 72.5% |
| 3460576 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.52 | 46.0 | 2.82e-01 | 100.0% | 16.9% |
| 3914722 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 34.0 | 2.99e-01 | 70.5% | 61.3% |
| 3256573 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.50 | 35.0 | 2.47e-01 | 70.5% | 19.4% |
| 1197 | 10.2.1.28 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Denso_VP4 | 0.50 | 36.0 | 2.16e-01 | 79.5% | 41.7% |
| 3883177 | 385.1.1.9 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › Sclerostin | 0.50 | 44.0 | 3.26e-01 | 97.7% | 56.4% |
| 4547928 | 11.1.1.61 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Hemocyanin_C | 0.50 | 38.0 | 2.71e-01 | 86.4% | 28.4% |
| 1117759 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.50 | 43.0 | 2.67e-01 | 100.0% | 25.6% |
D2
medium
residues 1-257
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 22.0 | 3.77e-01 | 72.8% | 96.4% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.61 | 24.0 | 3.27e-01 | 76.7% | 65.7% |
| 1w7cA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 24.0 | 3.52e-01 | 74.7% | 92.3% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.52 | 26.0 | 3.63e-01 | 87.5% | 96.1% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.52 | 23.0 | 3.34e-01 | 82.9% | 87.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3270992 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.65 | 26.0 | 3.51e-01 | 76.7% | 67.1% |
| 3647962 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.62 | 26.0 | 3.48e-01 | 76.7% | 69.0% |
| 3954692 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.61 | 24.0 | 3.71e-01 | 73.2% | 86.7% |
| 3239059 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.58 | 27.0 | 3.85e-01 | 73.9% | 91.7% |
| 3398694 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.52 | 23.0 | 3.54e-01 | 77.8% | 100.0% |