←Back to structures
OM475427.1__ULG00789.1__X__00070
Bact-VirOM475427.1__ULG00789.1__X__00070
Identity
- Accession:
- OM475427 ↗
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Taxonomy
TaxID: 2915331
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 61-141
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22399.2 best | DUF6979 | 51.4 | 1.70e-13 | 96.3% | 64.6% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u78A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 43.0 | 5.55e-01 | 93.8% | 100.0% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 45.0 | 5.61e-01 | 91.4% | 100.0% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.66 | 32.0 | 3.23e-01 | 71.6% | 45.6% |
| 2j5oA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 5.28e-01 | 93.8% | 100.0% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 4.44e-01 | 87.7% | 62.1% |
| 3bddD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 4.24e-01 | 86.4% | 55.3% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 4.30e-01 | 86.4% | 65.9% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 5.12e-01 | 88.9% | 100.0% |
| 2xi9A03 | 1.10.150.480 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 44.0 | 4.14e-01 | 85.2% | 80.2% |
| 3m6zA03 | 1.10.150.740 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 34.0 | 3.60e-01 | 86.4% | 70.0% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 46.0 | 3.64e-01 | 100.0% | 68.4% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 40.0 | 3.86e-01 | 84.0% | 69.1% |
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 4.29e-01 | 97.5% | 98.5% |
| 6qelA01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.54 | 41.0 | 3.39e-01 | 82.7% | 55.6% |
| 2uytA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 45.0 | 3.30e-01 | 96.3% | 64.3% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.52 | 44.0 | 3.98e-01 | 91.4% | 77.1% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.52 | 39.0 | 3.82e-01 | 79.0% | 95.5% |
| 2i5hA02 | 1.10.150.280 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AF1531-like domain | 0.52 | 35.0 | 3.34e-01 | 72.8% | 58.3% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.52 | 37.0 | 3.89e-01 | 85.2% | 84.7% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2325850 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 45.0 | 5.41e-01 | 91.4% | 96.1% |
| 4998812 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.71 | 46.0 | 5.09e-01 | 86.4% | 81.5% |
| 3923891 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.70 | 40.0 | 4.87e-01 | 95.1% | 92.0% |
| 5062184 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.69 | 47.0 | 5.30e-01 | 77.8% | 93.3% |
| 3407601 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 45.0 | 5.14e-01 | 95.1% | 90.0% |
| 5075437 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.69 | 46.0 | 4.92e-01 | 90.1% | 78.6% |
| 4926894 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.69 | 44.0 | 5.04e-01 | 86.4% | 88.3% |
| 3279531 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.68 | 44.0 | 5.11e-01 | 90.1% | 96.4% |
| 3649101 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 46.0 | 4.33e-01 | 71.6% | 79.0% |
| 4964816 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.66 | 44.0 | 5.03e-01 | 76.5% | 100.0% |
| 3424337 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.66 | 49.0 | 4.94e-01 | 77.8% | 88.7% |
| 5040788 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 41.0 | 4.48e-01 | 90.1% | 78.5% |
| 3279501 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.65 | 58.0 | 4.47e-01 | 100.0% | 66.5% |
| 4159768 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 39.0 | 4.62e-01 | 97.5% | 96.0% |
| 3421785 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.65 | 50.0 | 4.28e-01 | 82.7% | 71.5% |
| 3684804 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.64 | 42.0 | 4.91e-01 | 92.6% | 98.2% |
| 5019927 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 53.0 | 4.95e-01 | 90.1% | 89.8% |
| 5071263 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 52.0 | 5.00e-01 | 88.9% | 96.7% |
| 4944537 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 46.0 | 4.92e-01 | 80.2% | 100.0% |
| 4561199 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.62 | 51.0 | 5.13e-01 | 88.9% | 100.0% |
| 3647798 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 44.0 | 4.87e-01 | 91.4% | 95.4% |
| 4931273 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.61 | 51.0 | 5.26e-01 | 90.1% | 100.0% |
| 3522390 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 45.0 | 3.72e-01 | 77.8% | 95.1% |
| 3226184 | 101.1.10.6 ↗ | alpha arrays › HTH › HTH › Cyclin-like › RB_A | 0.59 | 45.0 | 3.35e-01 | 82.7% | 39.1% |
| 4946202 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 44.0 | 4.50e-01 | 82.7% | 86.3% |
| 4940863 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 44.0 | 4.45e-01 | 96.3% | 79.5% |
| 3577575 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 48.0 | 4.86e-01 | 96.3% | 90.0% |
| 3998882 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 43.0 | 4.26e-01 | 81.5% | 77.6% |
| 4231043 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 43.0 | 3.07e-01 | 82.7% | 34.2% |
| 3737512 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.55 | 48.0 | 3.99e-01 | 100.0% | 96.7% |
| 2552 | 101.1.1.28 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SWIRM | 0.55 | 45.0 | 4.24e-01 | 90.1% | 76.2% |
| 3750743 | 103.15.1.3 ↗ | alpha arrays › RuvA-C › Mitoribosomal protein mS23 › Mitoribosomal protein mS23 › MRP-S23, MRP-S25 | 0.53 | 36.0 | 3.04e-01 | 71.6% | 42.2% |
| 4991088 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 45.0 | 4.53e-01 | 95.1% | 93.8% |
| 2883301 | 103.15.1.1 ↗ | alpha arrays › RuvA-C › Mitoribosomal protein mS23 › Mitoribosomal protein mS23 › MRP-S23 | 0.53 | 36.0 | 3.04e-01 | 71.6% | 52.2% |
| 3415010 | 101.1.2.712 ↗ | alpha arrays › HTH › HTH › winged helix domain › FNIP_C | 0.53 | 46.0 | 3.19e-01 | 96.3% | 81.0% |
| 4051624 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.53 | 39.0 | 3.63e-01 | 92.6% | 61.9% |
| 3254469 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.51 | 44.0 | 3.49e-01 | 100.0% | 64.4% |
| 4106860 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.51 | 41.0 | 3.92e-01 | 88.9% | 85.3% |
| 3955616 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.50 | 36.0 | 2.52e-01 | 76.5% | 37.0% |