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OM621816.1__UNA00760.1__ZHS_4__00004

Bact-Vir

OM621816.1__UNA00760.1__ZHS_4__00004

Identity

Accession:
OM621816 ↗
Kingdom:
phage

Quality

77.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Edwardsiella_phage_vB_EpM_ZHS

TaxID: 2923251

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-196
PDB
Domain cluster: rep: MT028491.1__QIG66049.1__phiOC_p407__00383__D25-155
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23474.2 best Acb1 80.5 1.50e-22 99.3% 94.5%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qakA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.76 71.0 6.60e-01 100.0% 94.2%
1jh6A00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.74 68.0 6.24e-01 100.0% 91.7%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 25.0 3.43e-01 85.1% 78.9%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 28.0 3.69e-01 90.8% 97.2%
1lk5A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 27.0 3.38e-01 85.8% 81.0%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 27.0 3.14e-01 86.5% 65.7%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 26.0 3.02e-01 86.5% 64.1%
5d4nC00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 27.0 3.15e-01 85.8% 71.4%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937535 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.78 73.0 6.74e-01 100.0% 96.0%
4972305 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.75 69.0 6.39e-01 99.3% 93.3%
5047137 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.75 70.0 6.35e-01 100.0% 94.6%
1953031 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.75 70.0 6.49e-01 100.0% 93.1%
None — 0.73 68.0 6.22e-01 100.0% 95.0%
5063905 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.73 68.0 6.36e-01 100.0% 94.7%
5062926 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.73 67.0 6.40e-01 100.0% 92.1%
3738455 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.72 65.0 5.87e-01 99.3% 96.4%
3735878 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.70 64.0 5.76e-01 99.3% 93.3%
4423124 264.1.1.15 ↗ beta barrels › LigT-like › LigT-related › LigT-related › DUF1045 0.67 61.0 5.17e-01 100.0% 95.7%
3608079 264.1.1.10 ↗ beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD 0.66 59.0 5.98e-01 95.0% 100.0%
3709497 264.1.1.10 ↗ beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD 0.66 60.0 5.96e-01 97.2% 97.9%
3611297 264.1.1.0 ↗ beta barrels › LigT-like › LigT-related › LigT-related 0.63 59.0 5.89e-01 100.0% 99.3%
3471665 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.53 21.0 2.85e-01 75.9% 68.6%
5047563 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 26.0 3.34e-01 92.2% 86.7%
D2 medium residues 1-52
PDB