Back to structures

OM621816.1__UNA00844.1__ZHS_88__00088

Bact-Vir

OM621816.1__UNA00844.1__ZHS_88__00088

Identity

Accession:
OM621816 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-102
PDB
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.64 40.0 4.41e-01 79.4% 80.3%
5jtwA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 37.0 3.64e-01 77.3% 53.9%
4do8A00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.63 40.0 4.64e-01 96.9% 93.9%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.62 36.0 4.40e-01 79.4% 93.3%
3waiA02 2.60.40.3390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 35.0 3.62e-01 75.3% 61.3%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 37.0 3.98e-01 80.4% 81.0%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 33.0 3.79e-01 78.4% 83.6%
1ywhC03 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.56 44.0 4.58e-01 100.0% 93.2%
5icuA00 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 31.0 3.13e-01 80.4% 52.0%
1l9nA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.39e-01 79.4% 60.5%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.50 33.0 3.21e-01 80.4% 58.6%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4655959 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 35.0 3.55e-01 81.4% 51.0%
3235704 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.63 47.0 5.00e-01 100.0% 90.5%
4128974 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.62 41.0 4.43e-01 80.4% 81.2%
4990637 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.61 39.0 4.20e-01 80.4% 75.9%
4084879 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.61 40.0 4.28e-01 80.4% 77.6%
3558274 4096.1.1.1 a+b two layers › NAP-like › NAP-like › NAP-like › NAP 0.61 42.0 2.97e-01 71.1% 82.7%
3338688 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.60 39.0 4.63e-01 77.3% 98.5%
3702557 3945.1.1.0 alpha superhelices › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain 0.60 36.0 3.27e-01 81.4% 42.3%
5045949 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 36.0 3.56e-01 78.4% 57.1%
3965010 3115.4.1.1 a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 0.56 37.0 3.80e-01 80.4% 71.1%
3484366 284.1.2.1 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C 0.55 41.0 4.09e-01 78.4% 100.0%
5000510 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.55 39.0 4.32e-01 81.4% 98.7%
3858827 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.54 31.0 3.25e-01 79.4% 58.9%
3216873 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.54 34.0 3.18e-01 80.4% 47.7%
4568169 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.53 40.0 4.16e-01 99.0% 88.9%
3411558 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.53 46.0 4.07e-01 95.9% 85.7%
3905094 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.52 44.0 4.01e-01 94.8% 85.9%
3990833 382.1.1.13 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Ly-6_related 0.52 42.0 4.26e-01 87.6% 94.7%
3785342 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 37.0 2.71e-01 75.3% 65.5%
3259237 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.52 39.0 4.18e-01 80.4% 98.8%
4940074 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 33.0 3.38e-01 78.4% 67.4%