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OM634653.1__UNH58460.1__X__00117

Bact-Vir

OM634653.1__UNH58460.1__X__00117

Identity

Accession:
OM634653 ↗
Kingdom:
phage

Quality

85.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-80
PDB
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1va9A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.73 45.0 3.88e-01 100.0% 40.2%
3h3iA00 2.40.128.220 Mainly Beta › Beta Barrel › Lipocalin › 0.71 64.0 5.31e-01 100.0% 89.1%
5jh8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.71 48.0 5.18e-01 94.9% 83.6%
2q7aA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 64.0 5.11e-01 100.0% 83.6%
1eq6A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.70 56.0 4.24e-01 87.3% 43.9%
3rwxA02 2.40.128.350 Mainly Beta › Beta Barrel › Lipocalin › 0.69 63.0 5.29e-01 100.0% 92.4%
1vjhA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.68 55.0 4.81e-01 87.3% 59.2%
1lgyA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.68 51.0 3.53e-01 79.7% 25.7%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.67 47.0 5.32e-01 91.1% 100.0%
3holA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.67 58.0 4.65e-01 100.0% 88.0%
2q7nA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 43.0 4.02e-01 100.0% 53.1%
3v8uA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.66 59.0 4.57e-01 100.0% 90.5%
3p51A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.66 49.0 4.09e-01 81.0% 66.2%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 53.0 4.28e-01 87.3% 64.9%
3g7nB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 45.0 3.11e-01 79.7% 21.8%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.64 56.0 4.36e-01 100.0% 89.3%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 42.0 4.37e-01 72.2% 72.0%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 57.0 4.84e-01 100.0% 79.8%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 57.0 4.73e-01 100.0% 88.3%
1njhA00 2.70.180.10 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › Hypothetical protein YojF 0.63 56.0 5.07e-01 100.0% 76.9%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 48.0 4.07e-01 83.5% 65.7%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 56.0 4.63e-01 100.0% 81.3%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.62 43.0 3.96e-01 88.6% 53.7%
2p25A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 41.0 3.58e-01 91.1% 45.4%
4kcaA03 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.61 55.0 5.12e-01 100.0% 93.8%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 47.0 3.89e-01 86.1% 69.4%
3so6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 53.0 4.46e-01 100.0% 73.0%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.58 53.0 3.60e-01 100.0% 85.3%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 51.0 3.30e-01 97.5% 98.1%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 46.0 4.84e-01 97.5% 98.6%
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 51.0 4.51e-01 100.0% 84.3%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 50.0 4.02e-01 100.0% 68.3%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 50.0 3.94e-01 98.7% 65.7%
3ebkB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 49.0 3.96e-01 100.0% 61.0%
3cnvA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.57 49.0 4.04e-01 100.0% 83.2%
2f7lA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.57 39.0 3.90e-01 81.0% 68.2%
6kghA02 3.30.450.330 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 50.0 4.02e-01 100.0% 62.3%
3lhoA01 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.56 46.0 3.42e-01 97.5% 84.5%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 49.0 3.22e-01 98.7% 90.5%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.55 37.0 3.46e-01 100.0% 53.3%
3nybA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 46.0 4.23e-01 97.5% 73.6%
3f8lB00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.55 47.0 3.79e-01 100.0% 75.4%
3bwgA02 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.55 47.0 3.88e-01 100.0% 80.3%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.55 48.0 4.72e-01 100.0% 94.0%
2dg1C00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 48.0 3.20e-01 98.7% 95.6%
2ikkA00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.54 47.0 3.91e-01 98.7% 87.7%
3wewA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 2.94e-01 79.7% 44.6%
3omlA03 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 2.90e-01 81.0% 41.7%
3hfiA00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.54 47.0 3.99e-01 100.0% 93.4%
3ck1A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.45e-01 83.5% 70.6%
3eqvA02 3.30.450.330 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 45.0 3.86e-01 100.0% 56.4%
2ooiA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.54 46.0 3.79e-01 98.7% 83.1%
7q5yB01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.54 44.0 3.88e-01 98.7% 60.8%
5df7A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 47.0 3.13e-01 100.0% 83.1%
1e25A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 46.0 3.25e-01 100.0% 84.5%
3l5zA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.53 45.0 3.87e-01 100.0% 92.6%
1mwsA04 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 45.0 3.03e-01 98.7% 86.1%
2oafB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 41.0 3.43e-01 86.1% 93.1%
3ddvB01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.52 45.0 3.84e-01 100.0% 92.0%
1g1bA00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.52 44.0 3.55e-01 97.5% 94.5%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.52 46.0 3.24e-01 100.0% 42.2%
6g9sA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 44.0 2.96e-01 100.0% 90.5%
3iuzA00 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.51 41.0 2.81e-01 92.4% 30.6%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.50 43.0 3.66e-01 98.7% 65.0%
3jamD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.50 38.0 3.29e-01 83.5% 75.2%
1k25B02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 43.0 2.98e-01 100.0% 81.7%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4023863 309.1.1.16 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16, Peptidase_M16_C, M16C_assoc, PreP_C 0.76 47.0 2.58e-01 100.0% 4.4%
5048999 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.71 59.0 4.79e-01 88.6% 50.7%
3493625 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 58.0 4.85e-01 100.0% 75.0%
4486641 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.65 60.0 3.29e-01 100.0% 48.7%
3707284 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 58.0 5.03e-01 100.0% 66.7%
3401928 220.1.1.192 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP_C 0.62 56.0 4.65e-01 100.0% 65.9%
3520566 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.62 55.0 4.25e-01 100.0% 62.9%
5051933 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 40.0 3.05e-01 88.6% 30.6%
3256189 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.61 54.0 3.54e-01 100.0% 71.7%
3559597 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.61 54.0 4.43e-01 100.0% 77.9%
3425128 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.60 57.0 4.21e-01 100.0% 75.0%
3266104 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.60 54.0 3.52e-01 100.0% 78.3%
3714275 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.60 54.0 3.68e-01 100.0% 77.8%
3408623 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.59 50.0 3.88e-01 96.2% 42.6%
3264686 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.59 54.0 4.11e-01 98.7% 80.6%
4939739 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.59 40.0 4.37e-01 100.0% 93.2%
4932562 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 52.0 4.63e-01 100.0% 71.3%
3717200 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 53.0 3.42e-01 100.0% 88.0%
3278650 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 44.0 3.71e-01 83.5% 65.7%
4033140 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.58 43.0 3.11e-01 79.7% 31.7%
3695196 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 52.0 3.11e-01 100.0% 75.1%
3937294 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.57 53.0 3.96e-01 100.0% 73.9%
4013462 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 41.0 2.73e-01 100.0% 20.3%
4014955 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.57 43.0 3.57e-01 100.0% 47.7%
4033266 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.56 41.0 2.93e-01 79.7% 28.7%
3925426 220.1.1.176 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 0.56 48.0 4.07e-01 100.0% 60.7%
3387934 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.55 39.0 3.71e-01 87.3% 62.1%
3932365 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 49.0 3.17e-01 97.5% 98.5%
3411887 5.1.4.295 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_DCAF12 0.54 48.0 3.12e-01 98.7% 98.3%
3948977 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 40.0 3.66e-01 89.9% 58.2%
3966115 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 48.0 3.77e-01 100.0% 48.8%
4654177 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.53 41.0 2.96e-01 86.1% 60.0%
3734609 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.53 35.0 2.93e-01 100.0% 37.9%
3183036 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 46.0 3.93e-01 98.7% 62.3%
3630687 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 46.0 3.77e-01 100.0% 53.3%
3682205 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 44.0 3.63e-01 100.0% 51.0%
2756224 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.52 37.0 3.27e-01 100.0% 51.3%
3720887 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.52 32.0 2.72e-01 83.5% 36.3%
3714469 2002.1.1.45 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd 0.52 40.0 2.45e-01 88.6% 36.3%
4076464 814.1.1.2 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Chor_lyase 0.51 44.0 3.59e-01 100.0% 73.8%
4952007 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 40.0 3.49e-01 87.3% 56.9%
2771756 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 38.0 3.91e-01 89.9% 86.5%
None 0.50 43.0 2.84e-01 100.0% 96.9%
3515029 223.2.1.46 a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, FNIP_M 0.50 45.0 3.66e-01 100.0% 54.0%
3651713 223.1.1.12 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_2 0.50 39.0 3.14e-01 87.3% 56.0%