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OM634661.1__UNY39817.1__KLEB273_gp033__00033

Bact-Vir

OM634661.1__UNY39817.1__KLEB273_gp033__00033

Identity

Accession:
OM634661 ↗
Kingdom:
phage

Quality

83.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_vB_BauM_KLEB27-3

TaxID: 2927635

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-76
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.78 51.0 5.25e-01 77.5% 71.6%
1vquA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.72 49.0 5.08e-01 84.5% 76.1%
4l9mA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.71 54.0 4.42e-01 81.7% 76.7%
6axgA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.70 52.0 4.88e-01 80.3% 100.0%
2bnxB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.69 52.0 3.60e-01 84.5% 23.7%
4j8sA00 1.25.40.840 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain 0.68 59.0 4.44e-01 98.6% 67.2%
4c9bB00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 59.0 3.97e-01 100.0% 51.3%
5tqbB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 58.0 3.74e-01 100.0% 29.8%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.65 51.0 4.40e-01 85.9% 65.5%
4ks9A01 1.20.140.90 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain 0.64 51.0 4.25e-01 87.3% 61.9%
5c8aA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.62 46.0 4.56e-01 83.1% 96.2%
5m9dA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 54.0 4.36e-01 100.0% 69.6%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.61 43.0 3.74e-01 76.1% 84.6%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 47.0 4.69e-01 85.9% 93.2%
1fafA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.60 46.0 4.45e-01 97.2% 74.7%
5wp3B00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.59 47.0 4.22e-01 88.7% 89.2%
3ceqA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 51.0 3.54e-01 100.0% 35.6%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.58 44.0 4.24e-01 83.1% 94.0%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 49.0 4.34e-01 97.2% 71.0%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.57 45.0 3.99e-01 88.7% 89.9%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.56 43.0 4.01e-01 88.7% 99.0%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 3.70e-01 73.2% 73.8%
4ks9B02 3.40.630.150 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Malonyl-CoA decarboxylase, catalytic domain 0.55 43.0 2.95e-01 87.3% 37.9%
2au5A00 1.20.120.590 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › EF2947-like 0.55 43.0 3.60e-01 87.3% 64.3%
3htvA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 44.0 3.34e-01 87.3% 57.1%
2p6vA00 1.20.120.1110 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain 0.53 41.0 3.74e-01 83.1% 88.7%
2fq4A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 40.0 3.34e-01 90.1% 54.7%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3914600 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.73 54.0 3.77e-01 88.7% 24.9%
3781166 184.1.1.1 ↗ alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N 0.73 53.0 5.40e-01 88.7% 78.6%
3488533 109.4.1.365 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTTN_N 0.72 56.0 4.62e-01 84.5% 73.8%
3725918 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 58.0 3.56e-01 100.0% 23.6%
3755128 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.65 51.0 4.70e-01 87.3% 90.5%
3591850 4030.1.1.0 ↗ alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz 0.65 44.0 4.61e-01 90.1% 78.5%
3184710 1134.1.1.7 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 0.65 48.0 4.90e-01 87.3% 82.9%
5004872 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.63 51.0 3.65e-01 93.0% 28.7%
3199268 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.62 46.0 4.52e-01 78.9% 85.3%
3305344 109.4.1.1745 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Xpo1, TPR_TNPO3_IPO13_2nd 0.61 53.0 3.16e-01 100.0% 15.7%
3513428 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 52.0 3.43e-01 100.0% 48.6%
4997464 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.59 50.0 3.59e-01 100.0% 57.1%
5000788 5060.1.1.0 ↗ alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C 0.59 45.0 4.02e-01 84.5% 76.2%
5072337 5073.1.1.11 ↗ alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C 0.57 47.0 2.97e-01 100.0% 36.3%
3668207 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.56 50.0 3.68e-01 100.0% 52.1%
3378872 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.56 48.0 4.27e-01 100.0% 95.5%
3384796 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 47.0 4.24e-01 97.2% 77.0%
3391429 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 47.0 3.80e-01 100.0% 63.3%
4951532 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.55 38.0 4.08e-01 91.5% 85.0%
4638447 129.1.1.9 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C 0.55 45.0 3.69e-01 98.6% 72.0%
3711066 4156.1.1.4 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C 0.54 43.0 3.27e-01 84.5% 73.9%
3416035 104.1.1.0 ↗ alpha duplicates or obligate multimers › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain 0.53 37.0 4.00e-01 85.9% 98.2%
3841169 186.2.1.1 ↗ alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box 0.53 45.0 3.59e-01 100.0% 45.2%
3860830 2004.1.1.564 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HA2_N, HA2_C 0.52 45.0 2.69e-01 100.0% 13.9%
3579332 4156.1.1.2 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C 0.51 44.0 3.19e-01 97.2% 37.5%
D2 medium residues 91-229
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4da2A01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 41.0 5.27e-01 71.2% 91.1%
4b9wA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 53.0 5.92e-01 89.2% 90.7%
3bdlA03 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 58.0 6.12e-01 97.8% 88.0%
4qmgA02 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 58.0 5.79e-01 100.0% 80.6%
1a2tA00 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 61.0 6.22e-01 100.0% 90.4%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 41.0 5.19e-01 71.2% 96.2%
1g29103 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.69 34.0 4.78e-01 71.9% 100.0%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 35.0 4.78e-01 100.0% 98.6%
3bdlA02 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 58.0 5.59e-01 100.0% 80.5%
3ntkB01 2.40.50.790 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 42.0 5.21e-01 76.3% 100.0%
5j39A01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 54.0 5.67e-01 89.2% 95.2%
2k52A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 34.0 4.46e-01 70.5% 93.2%
4qmgC01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 56.0 5.35e-01 100.0% 79.9%
3bzcA05 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 37.0 4.31e-01 93.5% 79.2%
5ygbA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 54.0 5.55e-01 88.5% 100.0%
1uwvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 35.0 4.59e-01 87.1% 100.0%
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 58.0 5.50e-01 99.3% 84.9%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 27.0 3.57e-01 87.8% 73.7%
3o2zP00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 41.0 4.40e-01 86.3% 83.6%
3psiA06 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 34.0 3.88e-01 71.2% 76.0%
3m7nA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 34.0 4.23e-01 70.5% 93.0%
1jt8A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 31.0 3.52e-01 70.5% 67.6%
1tgoA05 1.10.132.60 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain 0.56 31.0 2.90e-01 92.8% 42.5%
4rg1A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 26.0 3.41e-01 98.6% 92.3%
2zyzC00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.53 26.0 3.08e-01 97.8% 67.7%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3518837 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.81 52.0 5.51e-01 77.0% 72.0%
3514952 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.80 53.0 5.58e-01 84.2% 74.4%
3883142 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.78 55.0 6.20e-01 91.4% 95.2%
3565696 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.77 52.0 6.03e-01 96.4% 95.0%
3561627 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.77 53.0 6.01e-01 89.2% 92.4%
3599639 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.77 66.0 6.40e-01 100.0% 82.7%
3894374 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.77 58.0 6.04e-01 97.8% 83.8%
3776626 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.77 58.0 5.71e-01 97.8% 73.2%
3765273 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.77 51.0 5.84e-01 88.5% 89.5%
3564425 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.76 52.0 5.79e-01 83.5% 87.3%
3399411 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.76 47.0 5.64e-01 84.2% 94.4%
3921697 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.76 54.0 6.05e-01 100.0% 92.7%
3276512 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.76 56.0 5.86e-01 97.8% 82.3%
3911228 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.75 53.0 5.93e-01 91.4% 91.8%
3879038 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.75 51.0 5.69e-01 83.5% 87.3%
3847353 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.75 51.0 5.73e-01 84.9% 88.2%
3414044 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.75 46.0 5.74e-01 83.5% 100.0%
3514190 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.75 52.0 5.86e-01 88.5% 90.9%
3877939 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.75 56.0 5.97e-01 90.6% 89.2%
3914796 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.74 53.0 5.86e-01 85.6% 91.8%
3856441 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.74 52.0 5.56e-01 90.6% 83.3%
3881120 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.74 53.0 5.94e-01 100.0% 97.1%
4399208 2.1.1.83 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N 0.74 42.0 5.33e-01 71.2% 96.2%
3397365 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.73 52.0 5.62e-01 89.9% 87.0%
4459066 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.73 51.0 5.10e-01 87.1% 70.0%
3856429 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.73 55.0 5.92e-01 100.0% 90.0%
4490085 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.70 38.0 5.03e-01 95.7% 97.3%
4966291 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.70 55.0 5.79e-01 97.1% 92.0%
3611847 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.69 54.0 5.13e-01 97.8% 69.1%
3730357 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.69 58.0 5.85e-01 100.0% 88.6%
3516864 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.69 48.0 5.18e-01 84.9% 83.3%
3566729 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.69 52.0 5.85e-01 87.1% 100.0%
3226806 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.69 49.0 5.51e-01 85.6% 96.2%
3414735 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.69 47.0 5.17e-01 86.3% 87.3%
3271235 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 36.0 4.72e-01 95.0% 93.3%
3195528 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.68 56.0 5.68e-01 100.0% 87.1%
3515845 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.68 59.0 5.08e-01 100.0% 62.0%
3512349 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.67 48.0 5.46e-01 83.5% 99.0%
4026270 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.66 61.0 5.72e-01 97.8% 83.0%
3393322 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.66 47.0 5.34e-01 87.8% 98.1%
3498011 2.1.1.116 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.64 37.0 4.19e-01 100.0% 74.3%
3516246 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.63 43.0 5.01e-01 84.2% 100.0%
3367794 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 34.0 4.47e-01 95.0% 97.3%
3485854 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.62 58.0 5.59e-01 100.0% 91.0%
3765275 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.62 52.0 5.42e-01 98.6% 95.4%
4124147 2.1.1.116 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.61 36.0 3.97e-01 98.6% 71.8%
3740009 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 38.0 4.33e-01 100.0% 86.0%
3899845 2.1.1.116 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.60 38.0 4.50e-01 80.6% 92.6%
3991015 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.60 52.0 5.16e-01 93.5% 89.0%
3854815 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.60 38.0 4.47e-01 89.9% 92.6%
3530434 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.60 39.0 4.27e-01 80.6% 80.0%
3661229 2.1.1.226 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 0.59 38.0 4.51e-01 97.1% 94.7%
3601876 2.1.1.107 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 0.58 35.0 4.19e-01 71.2% 90.3%
3617000 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 37.0 4.23e-01 97.1% 92.0%
D3 medium residues 402-464
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.91 77.0 6.12e-01 88.9% 49.1%
4nq0A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.89 69.0 4.41e-01 81.0% 20.1%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.86 73.0 7.28e-01 96.8% 87.7%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.86 80.0 6.61e-01 100.0% 62.3%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.85 73.0 7.34e-01 92.1% 100.0%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.85 79.0 6.32e-01 100.0% 58.8%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.85 77.0 6.29e-01 100.0% 62.5%
4n06A02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.84 76.0 4.84e-01 96.8% 24.6%
2lmgA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.84 63.0 5.92e-01 79.4% 67.6%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 67.0 6.76e-01 98.4% 87.1%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.83 64.0 6.06e-01 82.5% 74.3%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 73.0 6.04e-01 100.0% 61.8%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 73.0 6.17e-01 100.0% 62.7%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.81 68.0 7.00e-01 92.1% 98.3%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 73.0 6.14e-01 100.0% 64.4%
1l5jA03 3.40.1060.10 Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 0.80 62.0 4.36e-01 81.0% 41.6%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 70.0 5.25e-01 100.0% 44.0%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.80 73.0 5.98e-01 100.0% 62.4%
2oezA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.79 69.0 5.00e-01 93.7% 37.4%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 71.0 6.53e-01 100.0% 79.0%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 68.0 6.41e-01 100.0% 83.5%
4nv0A02 1.10.150.340 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain 0.78 58.0 5.33e-01 85.7% 61.0%
1xl3C00 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.78 60.0 5.28e-01 82.5% 60.4%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 69.0 5.76e-01 100.0% 63.0%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.78 69.0 5.61e-01 100.0% 76.1%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.77 70.0 6.18e-01 100.0% 81.1%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.77 67.0 4.60e-01 100.0% 35.2%
1jalA03 1.10.150.300 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain 0.77 64.0 5.93e-01 95.2% 71.6%
4biuE01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.77 70.0 6.00e-01 100.0% 69.4%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.77 69.0 5.73e-01 100.0% 62.4%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.77 61.0 6.36e-01 88.9% 98.3%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.76 58.0 4.81e-01 82.5% 48.6%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.76 68.0 6.01e-01 98.4% 70.0%
3jcuZ00 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.75 62.0 6.36e-01 92.1% 96.7%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.74 65.0 6.24e-01 100.0% 100.0%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.74 53.0 5.79e-01 77.8% 100.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.74 63.0 5.37e-01 100.0% 60.0%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.74 67.0 5.51e-01 100.0% 63.1%
2jaeA03 1.20.1440.240 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.73 60.0 5.06e-01 87.3% 63.4%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.73 65.0 5.05e-01 98.4% 66.2%
1w9rA00 1.20.58.440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A 0.73 61.0 4.99e-01 93.7% 52.9%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.73 63.0 5.72e-01 100.0% 72.1%
6qumQ00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.73 64.0 6.11e-01 100.0% 95.9%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 59.0 5.75e-01 93.7% 88.7%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.72 60.0 6.01e-01 98.4% 93.8%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.72 61.0 5.76e-01 98.4% 97.4%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.71 60.0 5.63e-01 98.4% 85.2%
3t69A02 3.30.420.310 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain 0.71 51.0 3.45e-01 76.2% 21.2%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 59.0 5.11e-01 100.0% 74.8%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.70 59.0 4.65e-01 98.4% 44.8%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.70 62.0 5.17e-01 100.0% 62.4%
4a4kA01 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.70 57.0 4.74e-01 93.7% 51.3%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.69 58.0 5.64e-01 98.4% 89.0%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.69 60.0 5.82e-01 100.0% 94.4%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.68 57.0 5.51e-01 98.4% 89.0%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.67 56.0 5.32e-01 100.0% 84.6%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 49.0 4.47e-01 88.9% 66.7%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.57 42.0 4.19e-01 82.5% 81.5%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941435 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.94 89.0 6.46e-01 100.0% 44.7%
5048496 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.92 86.0 5.80e-01 100.0% 32.7%
5036455 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.91 69.0 4.32e-01 81.0% 17.2%
4971500 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.91 74.0 5.83e-01 85.7% 47.5%
5006936 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.91 84.0 8.32e-01 98.4% 100.0%
3476064 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.90 84.0 6.59e-01 100.0% 55.0%
3574626 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.89 84.0 6.26e-01 100.0% 47.1%
4079293 4946.1.1.1 ↗ alpha bundles › helical domain in YacF-like proteins › helical domain in YacF-like proteins › helical domain in YacF-like proteins › ZapD 0.89 72.0 5.04e-01 85.7% 31.2%
3723174 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.89 83.0 7.77e-01 100.0% 89.3%
3741348 103.1.1.3 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N 0.89 73.0 5.29e-01 88.9% 34.6%
4016292 192.2.1.18 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING 0.89 82.0 6.24e-01 100.0% 57.0%
4013967 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.88 76.0 4.44e-01 96.8% 13.1%
3708789 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.88 81.0 6.98e-01 100.0% 69.5%
3783055 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.88 82.0 6.63e-01 100.0% 60.0%
4493879 4992.1.1.23 ↗ extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.88 82.0 6.61e-01 100.0% 63.6%
4463205 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.87 79.0 4.59e-01 100.0% 14.0%
4386543 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.86 80.0 5.16e-01 100.0% 25.9%
2485668 7025.1.1.2 ↗ alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C 0.86 81.0 7.23e-01 100.0% 83.3%
3374816 192.15.1.3 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core 0.86 76.0 5.28e-01 95.2% 34.1%
3725377 192.15.1.44 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF6604 0.85 77.0 6.76e-01 98.4% 72.2%
4316383 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.85 79.0 6.77e-01 100.0% 69.5%
2636640 192.15.1.3 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core 0.85 75.0 6.99e-01 95.2% 81.8%
3341807 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.85 70.0 5.66e-01 88.9% 50.0%
3187917 192.15.1.3 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core 0.84 74.0 5.32e-01 95.2% 38.2%
3623410 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.84 77.0 4.40e-01 98.4% 20.7%
3539738 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.84 66.0 4.43e-01 84.1% 23.6%
3435612 192.15.1.2 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r 0.83 76.0 5.45e-01 98.4% 39.4%
3282520 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.83 68.0 6.57e-01 87.3% 85.7%
4469296 3809.1.1.2 ↗ alpha bundles › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Caudo_TAP 0.83 77.0 7.42e-01 100.0% 90.0%
4007679 192.15.1.109 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Caudo_TAP 0.83 75.0 7.11e-01 98.4% 83.8%
3403130 4323.1.1.1 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.83 75.0 5.44e-01 100.0% 42.4%
3842812 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.82 71.0 4.82e-01 98.4% 27.9%
3918068 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.81 73.0 5.93e-01 100.0% 58.3%
3788539 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.81 74.0 4.44e-01 100.0% 16.8%
3218862 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.81 70.0 5.18e-01 98.4% 39.4%
4020772 4207.1.1.64 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › PF30554 0.80 70.0 4.86e-01 100.0% 30.2%
4964259 5055.1.1.0 ↗ extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel 0.79 64.0 6.77e-01 92.1% 98.2%
3707236 3291.1.1.16 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Flagellar_rod 0.78 67.0 4.93e-01 100.0% 52.0%
3260684 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 62.0 6.61e-01 87.3% 100.0%
3975170 2485.1.1.6 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP 0.77 68.0 4.58e-01 100.0% 28.3%
3497418 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.76 64.0 5.47e-01 92.1% 61.0%
3699444 3755.3.1.6 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Flagellar_rod 0.76 66.0 4.59e-01 100.0% 29.3%
3628378 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.75 67.0 4.94e-01 100.0% 77.6%
4206858 4992.1.1.23 ↗ extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.75 65.0 5.38e-01 100.0% 55.7%
4970333 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.73 66.0 5.74e-01 100.0% 68.4%
4275409 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.73 63.0 5.34e-01 100.0% 58.2%
3732397 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.72 61.0 5.09e-01 100.0% 53.3%
5083776 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.72 60.0 5.33e-01 95.2% 63.2%
3477418 4992.1.1.12 ↗ extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.71 61.0 5.44e-01 100.0% 83.2%
3840952 601.19.1.39 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C 0.71 62.0 5.91e-01 100.0% 84.0%
5070202 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.70 58.0 4.26e-01 95.2% 34.1%
3754639 150.5.1.106 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C 0.68 58.0 5.33e-01 100.0% 89.4%
D4 medium residues 617-676
PDB