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OM634661.1__UNY39842.1__KLEB273_gp016__00016
Bact-VirOM634661.1__UNY39842.1__KLEB273_gp016__00016
Identity
- Accession:
- OM634661 ↗
- Kingdom:
- phage
Quality
74.7
mean pLDDT
Taxonomy
TaxID: 2927635
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 62-78_100-360
Domain cluster:
rep: IMGVR_UViG_3300032007_000207-3300032007-Ga0310695_100025474__D117-137_157-373
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25209.3 best | Phage_capsid_4 | 72.3 | 1.00e-19 | 80.9% | 98.2% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bjqA00 | 3.90.1690.10 | Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain | 0.72 | 63.0 | 6.21e-01 | 90.6% | 91.2% |
| 1ohgA01 | 3.30.2400.10 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › Major capsid protein gp5 | 0.71 | 36.0 | 5.12e-01 | 84.9% | 96.6% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.70 | 24.0 | 3.49e-01 | 81.3% | 63.8% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.69 | 22.0 | 3.40e-01 | 83.5% | 65.5% |
| 6i9gA01 | 3.30.2400.30 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › | 0.68 | 33.0 | 4.30e-01 | 84.5% | 78.7% |
| 3dktA01 | 3.30.2400.30 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › | 0.66 | 33.0 | 4.23e-01 | 84.5% | 78.7% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.61 | 18.0 | 3.43e-01 | 80.6% | 97.1% |
| 2gx8A02 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 17.0 | 2.90e-01 | 77.3% | 66.7% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 17.0 | 2.98e-01 | 83.8% | 71.1% |
| 6ofsA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.59 | 21.0 | 2.54e-01 | 82.7% | 44.6% |
| 1jmxA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 14.0 | 2.55e-01 | 78.8% | 60.8% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.58 | 23.0 | 3.02e-01 | 78.1% | 62.9% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.55 | 21.0 | 2.90e-01 | 88.5% | 66.4% |
| 1pbyA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 12.0 | 2.38e-01 | 78.8% | 61.8% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.54 | 26.0 | 2.97e-01 | 86.0% | 58.1% |
| 3p12A01 | 3.40.1650.10 | Alpha Beta › 3-Layer(aba) Sandwich › RbsD-like fold › RbsD-like domain | 0.51 | 23.0 | 3.30e-01 | 84.5% | 90.3% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988094 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.83 | 67.0 | 6.98e-01 | 89.2% | 89.8% |
| 194954 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.82 | 62.0 | 6.70e-01 | 88.5% | 89.8% |
| 4955362 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.80 | 61.0 | 6.64e-01 | 88.5% | 92.3% |
| 4929755 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.79 | 66.0 | 6.70e-01 | 89.6% | 86.9% |
| 3088027 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.79 | 66.0 | 6.78e-01 | 89.6% | 89.2% |
| 2995325 | 2485.3.1.9 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 | 0.78 | 69.0 | 6.17e-01 | 90.6% | 87.0% |
| 3946670 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.78 | 65.0 | 6.63e-01 | 89.6% | 86.5% |
| 3965498 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.78 | 68.0 | 6.38e-01 | 89.6% | 90.7% |
| 3949155 | 2485.3.1.11 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like | 0.78 | 65.0 | 6.64e-01 | 89.2% | 89.4% |
| 2651377 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.77 | 67.0 | 6.59e-01 | 89.6% | 87.9% |
| 2899245 | 2485.3.1.10 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 | 0.77 | 68.0 | 6.23e-01 | 91.0% | 90.2% |
| 4313471 | 2485.3.1.11 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like | 0.77 | 68.0 | 6.63e-01 | 91.0% | 87.0% |
| 2988313 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.77 | 66.0 | 6.68e-01 | 89.6% | 89.7% |
| 3075730 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.77 | 67.0 | 6.30e-01 | 90.3% | 86.9% |
| 4890673 | 2485.3.1.9 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF4043 | 0.76 | 67.0 | 6.11e-01 | 90.6% | 88.3% |
| 2989372 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.76 | 66.0 | 6.40e-01 | 89.6% | 89.1% |
| 2989506 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.76 | 66.0 | 6.52e-01 | 90.3% | 94.9% |
| 4031028 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.76 | 62.0 | 6.19e-01 | 91.0% | 82.5% |
| 3110786 | 2485.3.1.14 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp10A-like | 0.76 | 66.0 | 6.06e-01 | 89.6% | 85.5% |
| 2806362 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.76 | 60.0 | 6.22e-01 | 89.2% | 85.7% |
| 2989289 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.75 | 66.0 | 6.24e-01 | 90.6% | 89.8% |
| 4241362 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.75 | 65.0 | 6.41e-01 | 89.6% | 90.2% |
| 5041371 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.75 | 65.0 | 6.26e-01 | 89.6% | 94.2% |
| 2989340 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.75 | 65.0 | 6.18e-01 | 89.6% | 88.6% |
| 5081487 | 2485.3.1.10 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF5309 | 0.74 | 65.0 | 6.55e-01 | 89.6% | 98.2% |
| 3583655 | 2485.3.1.5 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 | 0.74 | 65.0 | 6.12e-01 | 89.6% | 89.7% |
| 4884207 | 2485.3.1.7 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside | 0.74 | 64.0 | 6.31e-01 | 88.8% | 89.0% |
| 3944238 | 2485.3.1.7 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside | 0.73 | 63.0 | 6.30e-01 | 89.6% | 96.1% |
| 3603036 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.73 | 59.0 | 6.17e-01 | 89.6% | 90.6% |
| 2989356 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.72 | 63.0 | 6.23e-01 | 90.3% | 91.2% |
| 2538948 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.72 | 63.0 | 6.19e-01 | 90.3% | 88.0% |
| 5081698 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.72 | 63.0 | 6.09e-01 | 89.6% | 89.8% |
| 5083051 | 2485.3.1.12 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF6260 | 0.72 | 63.0 | 6.22e-01 | 89.6% | 90.0% |
| 2841509 | 2485.3.1.12 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › DUF6260 | 0.72 | 62.0 | 6.08e-01 | 88.5% | 89.8% |
| 3977985 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.71 | 62.0 | 5.68e-01 | 89.2% | 74.1% |
| 2989363 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.71 | 61.0 | 5.94e-01 | 89.6% | 89.9% |
| 2806361 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.71 | 57.0 | 5.93e-01 | 89.6% | 88.5% |
| 4034134 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.70 | 23.0 | 3.50e-01 | 80.6% | 64.8% |
| 2724409 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.70 | 57.0 | 5.82e-01 | 89.2% | 86.4% |
| 5017604 | 872.3.1.1 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 | 0.70 | 25.0 | 4.42e-01 | 86.3% | 98.9% |
| 3977525 | 2485.3.1.4 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_P2 | 0.70 | 61.0 | 5.75e-01 | 91.0% | 86.8% |
| 2995627 | 2485.3.1.7 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside | 0.70 | 60.0 | 5.90e-01 | 89.6% | 89.0% |
| 3501742 | 2485.3.1.21 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phi29_MCP | 0.70 | 60.0 | 5.74e-01 | 88.5% | 91.6% |
| 2831773 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.69 | 56.0 | 5.76e-01 | 89.9% | 86.5% |
| 1877546 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.69 | 59.0 | 5.80e-01 | 89.2% | 89.7% |
| 3610546 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.69 | 28.0 | 4.56e-01 | 86.3% | 99.0% |
| 4995674 | 2485.3.1.5 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Gp23 | 0.69 | 55.0 | 5.76e-01 | 95.0% | 88.8% |
| 2553816 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.68 | 55.0 | 5.63e-01 | 89.2% | 86.4% |
| 4954548 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.68 | 59.0 | 6.00e-01 | 89.9% | 92.7% |
| 4941817 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 20.0 | 3.17e-01 | 78.1% | 63.3% |
| 3972055 | 11.1.1.410 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD | 0.67 | 19.0 | 2.99e-01 | 82.4% | 58.3% |
| 3700802 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.67 | 23.0 | 3.24e-01 | 83.8% | 59.3% |
| 3587769 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.66 | 58.0 | 5.74e-01 | 91.0% | 89.7% |
| 3919160 | 872.3.1.8 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3, YbjQ_4 | 0.66 | 25.0 | 2.92e-01 | 85.3% | 45.4% |
| 3798057 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.66 | 20.0 | 3.14e-01 | 79.9% | 64.5% |
| 3797542 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 19.0 | 3.01e-01 | 80.9% | 68.2% |
| 3992575 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.55 | 20.0 | 2.56e-01 | 83.1% | 49.7% |
| 3164700 | 2485.3.1.15 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Mu-like_gpT | 0.54 | 44.0 | 4.47e-01 | 92.8% | 83.0% |
| 1930620 | 1133.1.1.0 ↗ | beta sandwiches › Immunomodulator A46 N-terminal domain › Immunomodulator A46 N-terminal domain › Immunomodulator A46 N-terminal domain | 0.54 | 15.0 | 3.02e-01 | 72.3% | 90.8% |