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OM634661.1__UNY39943.1__KLEB273_gp141__00141

Bact-Vir

OM634661.1__UNY39943.1__KLEB273_gp141__00141

Identity

Accession:
OM634661 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_vB_BauM_KLEB27-3

TaxID: 2927635

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-51_128-139
PDB
Domain cluster: rep: NC_047950.1__YP_009800280.1__HOT04_gp087__00087__D1-43_107-117
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3o2iA00 3.30.70.2710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.42e-01 93.7% 76.3%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 39.0 3.42e-01 73.0% 69.7%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 46.0 3.77e-01 95.2% 81.3%
2ebkA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 37.0 2.97e-01 71.4% 72.7%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 39.0 2.99e-01 79.4% 83.7%
4lq0A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 38.0 2.98e-01 77.8% 86.1%
4yisB02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 38.0 2.96e-01 76.2% 83.8%
1j2vA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 38.0 3.34e-01 77.8% 98.0%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 38.0 3.28e-01 81.0% 94.4%
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 38.0 2.95e-01 77.8% 86.5%
7xoiD01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 33.0 2.79e-01 93.7% 37.4%
7c51A01 3.30.70.2970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 0.52 37.0 3.14e-01 77.8% 88.3%
3cjlA00 3.10.20.850 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 0.52 40.0 3.61e-01 85.7% 69.3%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.28e-01 90.5% 55.6%
4gxbA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 36.0 3.18e-01 79.4% 94.2%
5a72A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.50 38.0 2.94e-01 84.1% 77.7%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4997276 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 42.0 3.04e-01 73.0% 71.3%
4506613 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 45.0 3.31e-01 93.7% 86.1%
1790206 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.54 39.0 3.05e-01 76.2% 92.6%
4256472 3016.1.1.11 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA 0.53 34.0 2.83e-01 92.1% 39.0%
4997674 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.53 40.0 3.01e-01 81.0% 81.9%
1388654 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.52 38.0 2.83e-01 77.8% 75.0%
1787814 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.52 38.0 2.88e-01 77.8% 79.7%
4653164 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.52 36.0 2.86e-01 74.6% 91.9%
2092599 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.51 38.0 2.94e-01 79.4% 83.0%
3383201 3364.1.1.2 ↗ few secondary structure elements › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › EPF 0.51 31.0 3.49e-01 88.9% 84.1%
3591665 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 37.0 2.79e-01 79.4% 78.8%
4145584 3016.1.1.11 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA 0.51 35.0 2.98e-01 71.4% 45.7%
3390372 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.51 37.0 2.57e-01 79.4% 76.7%
4961488 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.50 37.0 2.35e-01 82.5% 60.0%
D2 medium residues 52-127
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3icjA03 3.10.310.70 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.55 46.0 4.28e-01 97.4% 100.0%
1fgsA01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.50 43.0 3.00e-01 100.0% 76.1%
1xfjA00 3.60.140.10 Alpha Beta › 4-Layer Sandwich › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases 0.50 40.0 2.86e-01 90.8% 56.2%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4998335 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 46.0 4.67e-01 89.5% 94.7%
3192514 108.1.1.25 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_4 0.56 44.0 3.68e-01 84.2% 67.4%
4141722 605.1.1.289 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PF26892 0.54 40.0 3.70e-01 90.8% 61.0%
3211777 5001.1.1.33 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srh 0.52 40.0 2.74e-01 86.8% 56.9%
4966383 330.7.1.0 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.51 32.0 3.63e-01 78.9% 87.3%
3338438 4974.1.1.4 ↗ alpha bundles › CRISPR-Cas system first helical domain › CRISPR-Cas system first helical domain › CRISPR-Cas system RNase C2c2 first helical domain › PF29561 0.50 40.0 3.28e-01 90.8% 46.2%
2671023 108.1.1.27 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.50 35.0 3.72e-01 100.0% 86.6%