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OM634661.1__UNY40043.1__KLEB273_gp051__00051
Bact-VirOM634661.1__UNY40043.1__KLEB273_gp051__00051
Identity
- Accession:
- OM634661 ↗
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Taxonomy
TaxID: 2927635
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-70
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6fndA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 50.0 | 3.52e-01 | 74.2% | 36.6% |
| 2pnqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.64 | 43.0 | 2.67e-01 | 71.0% | 41.9% |
| 1apyB00 | 3.60.20.30 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › (Glycosyl)asparaginase | 0.60 | 42.0 | 3.23e-01 | 72.6% | 85.1% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 40.0 | 3.16e-01 | 82.3% | 32.1% |
| 8gr2A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 41.0 | 2.93e-01 | 74.2% | 37.9% |
| 3gw6D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.15e-01 | 77.4% | 77.0% |
| 4hstA01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.58 | 43.0 | 3.29e-01 | 82.3% | 69.5% |
| 2kinA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.57 | 43.0 | 3.00e-01 | 83.9% | 95.4% |
| 5c9iD01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.57 | 44.0 | 3.33e-01 | 87.1% | 75.2% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 42.0 | 3.62e-01 | 79.0% | 89.8% |
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 44.0 | 3.16e-01 | 85.5% | 90.2% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.56 | 41.0 | 2.80e-01 | 80.6% | 62.0% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.55 | 37.0 | 3.64e-01 | 100.0% | 63.4% |
| 3g9kF01 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.54 | 41.0 | 3.08e-01 | 83.9% | 55.8% |
| 5lp7E01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 37.0 | 2.60e-01 | 72.6% | 27.1% |
| 3cobC00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 41.0 | 2.67e-01 | 91.9% | 53.2% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.52 | 40.0 | 2.90e-01 | 93.5% | 58.9% |
| 8fwpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 3.03e-01 | 96.8% | 52.6% |
| 6lw5A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 44.0 | 2.80e-01 | 93.5% | 44.7% |
| 4e80C01 | 1.10.1410.10 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.50 | 44.0 | 2.98e-01 | 95.2% | 34.9% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743175 | 630.1.1.0 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain | 0.65 | 52.0 | 3.80e-01 | 90.3% | 63.2% |
| 3016682 | 4038.1.1.2 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_prot_Gp6 | 0.60 | 33.0 | 2.73e-01 | 74.2% | 27.4% |
| 3375181 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.59 | 46.0 | 3.62e-01 | 88.7% | 79.3% |
| 3281823 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.58 | 44.0 | 3.34e-01 | 82.3% | 50.7% |
| 3981752 | 829.1.1.1 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB | 0.58 | 40.0 | 3.14e-01 | 72.6% | 97.7% |
| 3780957 | 109.2.1.19 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › C5-epim_C | 0.58 | 45.0 | 2.86e-01 | 88.7% | 60.0% |
| 3839854 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.58 | 47.0 | 3.42e-01 | 95.2% | 33.8% |
| 3987094 | 4967.1.1.11 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › GIIM | 0.58 | 39.0 | 3.15e-01 | 71.0% | 72.5% |
| 3620592 | 6155.1.1.15 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF846 | 0.56 | 42.0 | 3.24e-01 | 80.6% | 85.7% |
| 3999127 | 109.21.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 | 0.56 | 42.0 | 2.39e-01 | 82.3% | 27.6% |
| 3610398 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 38.0 | 3.65e-01 | 100.0% | 61.3% |
| 3734537 | 4009.1.1.3 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › KTI12 | 0.55 | 42.0 | 3.57e-01 | 82.3% | 75.0% |
| 3743565 | 109.4.1.313 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UTP20_N | 0.55 | 48.0 | 3.07e-01 | 100.0% | 36.9% |
| 4034385 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.54 | 48.0 | 3.95e-01 | 98.4% | 84.5% |
| 3213226 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.54 | 40.0 | 3.95e-01 | 77.4% | 86.2% |
| 4955569 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.54 | 41.0 | 2.93e-01 | 80.6% | 38.3% |
| 5026943 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 38.0 | 2.79e-01 | 75.8% | 27.9% |
| 3711095 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.53 | 40.0 | 3.73e-01 | 77.4% | 64.0% |
| 4948156 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.53 | 39.0 | 2.62e-01 | 77.4% | 94.3% |
| 4965204 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.53 | 46.0 | 3.72e-01 | 98.4% | 78.3% |
| 3402088 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 39.0 | 2.76e-01 | 80.6% | 25.5% |
| 4222853 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 45.0 | 3.73e-01 | 100.0% | 86.1% |
| 4928783 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 34.0 | 3.45e-01 | 71.0% | 68.3% |
| 223785 | 4963.1.1.1 ↗ | alpha complex topology › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › RdRP_4 | 0.51 | 39.0 | 2.52e-01 | 85.5% | 18.0% |
| 4345169 | 101.1.1.33 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 36.0 | 2.78e-01 | 75.8% | 89.0% |
| 3917386 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.51 | 44.0 | 3.22e-01 | 100.0% | 55.4% |
| 3672275 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.51 | 44.0 | 2.73e-01 | 100.0% | 73.0% |
| 3729945 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 37.0 | 2.95e-01 | 79.0% | 73.8% |
| 3326491 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 42.0 | 2.97e-01 | 91.9% | 53.3% |
| 5004463 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 39.0 | 2.56e-01 | 90.3% | 82.8% |
| 3377269 | 192.18.1.0 ↗ | alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like | 0.50 | 42.0 | 2.66e-01 | 100.0% | 27.0% |
| 4994978 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 40.0 | 2.55e-01 | 87.1% | 22.2% |