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OM634661.1__UNY40085.1__KLEB273_gp207__00207
Bact-VirOM634661.1__UNY40085.1__KLEB273_gp207__00207
Identity
- Accession:
- OM634661 ↗
- Kingdom:
- phage
Quality
82.7
mean pLDDT
Taxonomy
TaxID: 2927635
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-42
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4yt2A02 | 1.20.120.1300 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain | 0.91 | 82.0 | 5.90e-01 | 100.0% | 37.7% |
| 2b0jA02 | 1.20.120.1300 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hmd, C-terminal helical subdomain | 0.89 | 78.0 | 5.91e-01 | 100.0% | 43.5% |
| 1mjtB01 | 3.90.340.10 | Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 | 0.85 | 70.0 | 4.84e-01 | 95.0% | 28.7% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.83 | 70.0 | 5.49e-01 | 100.0% | 45.3% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 68.0 | 6.34e-01 | 100.0% | 76.9% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.81 | 68.0 | 4.96e-01 | 100.0% | 34.8% |
| 1oheA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.80 | 68.0 | 4.57e-01 | 100.0% | 26.2% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 63.0 | 5.72e-01 | 92.5% | 64.3% |
| 4mx8C01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.79 | 60.0 | 3.92e-01 | 92.5% | 18.5% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.79 | 66.0 | 5.11e-01 | 100.0% | 43.6% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.79 | 67.0 | 5.30e-01 | 100.0% | 48.2% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 67.0 | 5.91e-01 | 100.0% | 65.6% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.78 | 66.0 | 6.09e-01 | 100.0% | 81.1% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.77 | 64.0 | 5.40e-01 | 100.0% | 54.1% |
| 1e52A00 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.76 | 55.0 | 4.91e-01 | 82.5% | 55.4% |
| 5ekcF01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.74 | 62.0 | 3.75e-01 | 100.0% | 14.0% |
| 3vokA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.74 | 58.0 | 3.94e-01 | 100.0% | 22.7% |
| 3imoC00 | 3.30.920.70 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › | 0.72 | 59.0 | 4.44e-01 | 97.5% | 40.2% |
| 2lnzA00 | 1.10.286.70 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › Get5 dimerization domain | 0.71 | 55.0 | 5.52e-01 | 100.0% | 90.0% |
| 5hftD00 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.71 | 56.0 | 3.75e-01 | 87.5% | 27.3% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.70 | 59.0 | 4.59e-01 | 100.0% | 50.0% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 59.0 | 4.50e-01 | 100.0% | 68.6% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.70 | 57.0 | 5.13e-01 | 100.0% | 66.7% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 58.0 | 4.68e-01 | 100.0% | 89.0% |
| 1ufhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.68 | 54.0 | 3.80e-01 | 100.0% | 26.5% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 51.0 | 4.30e-01 | 87.5% | 52.1% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 4.26e-01 | 85.0% | 55.2% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.66 | 55.0 | 5.18e-01 | 100.0% | 76.5% |
| 3bc9A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 48.0 | 2.86e-01 | 85.0% | 10.9% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.65 | 52.0 | 3.43e-01 | 100.0% | 19.2% |
| 1le8A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 51.0 | 4.73e-01 | 90.0% | 71.7% |
| 2blfB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.65 | 53.0 | 4.69e-01 | 97.5% | 63.5% |
| 3fhnA05 | 1.10.10.2270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dsl1p vesicle tethering complex, Tip20p subunit, domain E | 0.64 | 51.0 | 4.40e-01 | 92.5% | 71.6% |
| 3ehmA03 | 1.20.120.840 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SusD-like, tetratrico peptide repeats domain | 0.64 | 50.0 | 3.61e-01 | 87.5% | 31.4% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.63 | 49.0 | 4.51e-01 | 90.0% | 66.0% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 55.0 | 4.72e-01 | 100.0% | 64.1% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 45.0 | 4.38e-01 | 82.5% | 76.6% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 53.0 | 4.09e-01 | 100.0% | 42.6% |
| 2ke4A00 | 6.10.140.470 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 45.0 | 3.53e-01 | 87.5% | 38.8% |
| 4ed9A02 | 3.30.1540.10 | Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › formyl-coa transferase, domain 3 | 0.59 | 46.0 | 3.57e-01 | 87.5% | 67.4% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 42.0 | 2.88e-01 | 95.0% | 59.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591004 | 3355.1.1.8 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › Na_H_antiporter | 0.95 | 86.0 | 4.78e-01 | 100.0% | 8.9% |
| 5015222 | 129.1.1.8 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › HMD | 0.93 | 86.0 | 5.96e-01 | 100.0% | 34.8% |
| 4032782 | 4125.1.1.0 ↗ | alpha superhelices › BH3980-like › BH3980-like › BH3980-like | 0.93 | 81.0 | 6.77e-01 | 97.5% | 58.5% |
| 3384504 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.88 | 76.0 | 6.10e-01 | 100.0% | 50.0% |
| 3456336 | 104.1.1.0 ↗ | alpha duplicates or obligate multimers › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain › TFIIA, alpha-helical domain | 0.88 | 77.0 | 6.97e-01 | 100.0% | 72.7% |
| 3934802 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.87 | 73.0 | 5.50e-01 | 95.0% | 40.0% |
| 3977163 | 3355.1.1.11 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › GntP_permease | 0.87 | 77.0 | 4.30e-01 | 100.0% | 9.0% |
| 4968245 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.85 | 73.0 | 4.61e-01 | 100.0% | 20.2% |
| 3434021 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.85 | 72.0 | 5.59e-01 | 100.0% | 44.4% |
| 4927593 | 136.1.1.0 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases | 0.85 | 72.0 | 4.36e-01 | 100.0% | 36.9% |
| 5080068 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.84 | 69.0 | 5.20e-01 | 95.0% | 39.0% |
| 5044338 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 71.0 | 5.22e-01 | 97.5% | 44.8% |
| 4679957 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.83 | 71.0 | 4.48e-01 | 100.0% | 19.1% |
| 3566988 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.83 | 73.0 | 5.08e-01 | 100.0% | 31.5% |
| 3270860 | 633.6.1.2 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX | 0.83 | 73.0 | 4.84e-01 | 100.0% | 26.5% |
| 4937043 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.82 | 73.0 | 4.20e-01 | 100.0% | 11.5% |
| 4012844 | 1076.1.1.0 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related | 0.81 | 70.0 | 4.17e-01 | 97.5% | 65.8% |
| 4942421 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.80 | 66.0 | 4.71e-01 | 97.5% | 32.2% |
| 5065711 | 7575.1.1.0 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like | 0.80 | 64.0 | 4.20e-01 | 97.5% | 21.1% |
| 5065662 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.80 | 68.0 | 5.73e-01 | 100.0% | 58.6% |
| 3434118 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 65.0 | 5.87e-01 | 100.0% | 66.7% |
| 3837790 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.79 | 67.0 | 4.94e-01 | 100.0% | 40.9% |
| 4954814 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.79 | 70.0 | 4.02e-01 | 100.0% | 19.8% |
| 4961037 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.77 | 60.0 | 5.54e-01 | 95.0% | 65.5% |
| 4951198 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.77 | 63.0 | 4.47e-01 | 97.5% | 30.8% |
| 4978574 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.77 | 65.0 | 4.32e-01 | 100.0% | 56.4% |
| 3923696 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.77 | 66.0 | 5.11e-01 | 100.0% | 47.8% |
| 3389858 | 3379.1.1.0 ↗ | extended segments › Photosystem II reaction center protein ycf12 › Photosystem II reaction center protein ycf12 › Photosystem II reaction center protein ycf12 | 0.75 | 65.0 | 6.30e-01 | 100.0% | 93.3% |
| 5003091 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.74 | 59.0 | 5.30e-01 | 97.5% | 61.7% |
| 3603679 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.74 | 60.0 | 4.30e-01 | 97.5% | 30.8% |
| 3282323 | 7064.1.1.9 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › GtrA_DPMS_TM | 0.74 | 63.0 | 4.34e-01 | 97.5% | 27.6% |
| 3215052 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.73 | 60.0 | 4.84e-01 | 97.5% | 45.9% |
| 4681216 | 1175.1.1.1 ↗ | alpha complex topology › Apolipoprotein N-acyltransferase transmembrane domain › Apolipoprotein N-acyltransferase transmembrane domain › Apolipoprotein N-acyltransferase transmembrane domain › LNT_N | 0.73 | 59.0 | 3.66e-01 | 95.0% | 33.6% |
| 4271716 | 101.28.1.1 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins › FlhC | 0.71 | 60.0 | 4.81e-01 | 100.0% | 56.5% |
| 4941372 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.70 | 60.0 | 4.75e-01 | 100.0% | 89.4% |
| 3700663 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.70 | 62.0 | 4.61e-01 | 100.0% | 42.0% |
| 1866912 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.70 | 58.0 | 4.47e-01 | 100.0% | 68.6% |
| 3417048 | 2498.1.1.5 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M13,Peptidase_M13_N | 0.70 | 57.0 | 3.15e-01 | 97.5% | 5.9% |
| None | — | 0.70 | 57.0 | 3.95e-01 | 100.0% | 28.4% | |
| 4025313 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.68 | 55.0 | 4.79e-01 | 100.0% | 57.1% |
| 11059 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.68 | 54.0 | 3.80e-01 | 100.0% | 26.5% |
| 3490145 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.68 | 56.0 | 3.68e-01 | 100.0% | 22.1% |
| 3589629 | 307.1.1.3 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › VanY | 0.65 | 54.0 | 3.54e-01 | 100.0% | 21.6% |
| 2968637 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.64 | 53.0 | 3.61e-01 | 100.0% | 50.9% |