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OM638088.1__UYL22518.1__CUB19_gp31c__00031
Bact-VirOM638088.1__UYL22518.1__CUB19_gp31c__00031
Identity
- Accession:
- OM638088 ↗
- Kingdom:
- phage
Quality
58.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-89
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 51.0 | 4.08e-01 | 100.0% | 40.1% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.65 | 46.0 | 4.23e-01 | 94.7% | 57.1% |
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 42.0 | 4.29e-01 | 100.0% | 72.4% |
| 2la7A01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 44.0 | 3.69e-01 | 100.0% | 44.5% |
| 3rlfF03 | 2.40.430.10 | Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP | 0.62 | 37.0 | 3.61e-01 | 100.0% | 52.3% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 36.0 | 3.72e-01 | 100.0% | 60.6% |
| 6xy9A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 51.0 | 3.40e-01 | 93.4% | 38.7% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 34.0 | 3.40e-01 | 94.7% | 53.1% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.58 | 33.0 | 3.29e-01 | 100.0% | 50.0% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 40.0 | 3.65e-01 | 94.7% | 52.3% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.57 | 36.0 | 3.97e-01 | 97.4% | 81.7% |
| 2p1jA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.57 | 43.0 | 3.59e-01 | 81.6% | 73.9% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 4.41e-01 | 92.1% | 82.7% |
| 4ftxB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.55 | 38.0 | 3.25e-01 | 72.4% | 53.9% |
| 2p0wA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 49.0 | 4.11e-01 | 100.0% | 78.2% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 48.0 | 3.09e-01 | 100.0% | 33.1% |
| 1ykdB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 43.0 | 3.23e-01 | 84.2% | 58.3% |
| 4a2bA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 41.0 | 3.52e-01 | 85.5% | 97.8% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.54 | 47.0 | 4.29e-01 | 100.0% | 98.1% |
| 4zohB03 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.54 | 47.0 | 4.29e-01 | 98.7% | 100.0% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 37.0 | 3.90e-01 | 72.4% | 88.4% |
| 1n62C02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.54 | 46.0 | 4.19e-01 | 98.7% | 100.0% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 42.0 | 3.22e-01 | 86.8% | 49.4% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 36.0 | 3.41e-01 | 100.0% | 56.8% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 45.0 | 2.93e-01 | 100.0% | 34.2% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 43.0 | 2.92e-01 | 92.1% | 34.8% |
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.53 | 33.0 | 3.07e-01 | 84.2% | 47.5% |
| 5gv0A00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 44.0 | 3.55e-01 | 100.0% | 53.7% |
| 3eb7A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.51 | 40.0 | 3.03e-01 | 88.2% | 54.3% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.51 | 41.0 | 3.17e-01 | 89.5% | 77.8% |
| 5tz6B02 | 3.10.129.120 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.51 | 43.0 | 3.53e-01 | 100.0% | 66.2% |
| 5mteA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.50 | 37.0 | 3.11e-01 | 78.9% | 90.5% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.50 | 37.0 | 3.09e-01 | 88.2% | 41.6% |
| 1y9lA00 | 2.40.128.230 | Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM | 0.50 | 39.0 | 3.54e-01 | 86.8% | 77.3% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 42.0 | 3.41e-01 | 94.7% | 53.3% |
| 1epwA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 41.0 | 2.94e-01 | 90.8% | 55.8% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 43.0 | 3.50e-01 | 100.0% | 53.5% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 224086 | 9.18.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.68 | 51.0 | 4.08e-01 | 100.0% | 40.1% |
| 3617894 | 9.1.1.45 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › FBO_C | 0.68 | 53.0 | 4.17e-01 | 100.0% | 41.3% |
| 3270749 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 48.0 | 4.77e-01 | 84.2% | 72.5% |
| 4159881 | 220.1.1.197 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 | 0.65 | 51.0 | 4.72e-01 | 84.2% | 100.0% |
| 3383138 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 40.0 | 4.06e-01 | 72.4% | 62.8% |
| 3781393 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.63 | 45.0 | 4.39e-01 | 75.0% | 79.8% |
| None | — | 0.63 | 55.0 | 4.17e-01 | 98.7% | 58.9% | |
| 3864859 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.62 | 49.0 | 3.53e-01 | 84.2% | 68.4% |
| 3295575 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.62 | 55.0 | 5.00e-01 | 98.7% | 87.0% |
| 3456597 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.62 | 54.0 | 4.16e-01 | 100.0% | 44.0% |
| 3491456 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.61 | 50.0 | 4.08e-01 | 93.4% | 74.0% |
| 3575810 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.60 | 49.0 | 3.84e-01 | 92.1% | 69.4% |
| 3170622 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.59 | 46.0 | 2.62e-01 | 85.5% | 9.4% |
| 3988496 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.59 | 45.0 | 3.29e-01 | 82.9% | 47.0% |
| 3534391 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.59 | 45.0 | 3.38e-01 | 82.9% | 75.8% |
| 3819740 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.59 | 51.0 | 4.90e-01 | 100.0% | 98.9% |
| 3933335 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.59 | 46.0 | 2.78e-01 | 85.5% | 15.0% |
| 3836527 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.58 | 50.0 | 4.12e-01 | 98.7% | 82.8% |
| 3443636 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 52.0 | 3.38e-01 | 100.0% | 32.2% |
| 3802306 | 284.1.2.0 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases | 0.58 | 51.0 | 4.78e-01 | 100.0% | 92.6% |
| 3451905 | 5015.1.1.0 ↗ | extended segments › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex | 0.58 | 36.0 | 4.20e-01 | 93.4% | 96.0% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.58 | 51.0 | 4.61e-01 | 100.0% | 83.8% |
| 3438374 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 46.0 | 3.00e-01 | 89.5% | 32.5% |
| 3803793 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.58 | 51.0 | 3.46e-01 | 100.0% | 34.9% |
| 4103309 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.58 | 42.0 | 3.18e-01 | 80.3% | 48.6% |
| 3805804 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.57 | 49.0 | 4.76e-01 | 96.1% | 100.0% |
| 3388311 | 1.1.7.100 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N | 0.57 | 40.0 | 3.91e-01 | 84.2% | 65.9% |
| 3664762 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.57 | 45.0 | 3.52e-01 | 100.0% | 38.3% |
| 3451480 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.57 | 43.0 | 3.46e-01 | 80.3% | 97.9% |
| 3478745 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.57 | 47.0 | 3.69e-01 | 92.1% | 68.5% |
| 4982498 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 44.0 | 2.61e-01 | 84.2% | 11.1% |
| 3957486 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.56 | 43.0 | 3.74e-01 | 97.4% | 53.3% |
| 5043802 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 51.0 | 4.40e-01 | 100.0% | 69.6% |
| 3632437 | 76.1.1.7 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › DUF7600 | 0.55 | 44.0 | 3.39e-01 | 88.2% | 49.7% |
| None | — | 0.55 | 46.0 | 3.10e-01 | 97.4% | 86.1% | |
| 3496018 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 48.0 | 2.93e-01 | 98.7% | 19.6% |
| 3208578 | 76.1.1.7 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › DUF7600 | 0.54 | 44.0 | 3.74e-01 | 88.2% | 61.6% |
| 1562389 | 3308.2.1.0 ↗ | beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › XAC2610 protein › XAC2610 protein | 0.54 | 47.0 | 3.45e-01 | 97.4% | 49.3% |
| 4988423 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.54 | 39.0 | 3.83e-01 | 75.0% | 75.0% |
| 3629780 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 42.0 | 2.79e-01 | 88.2% | 25.4% |
| 4544568 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.53 | 44.0 | 3.88e-01 | 90.8% | 97.3% |
| 4079710 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.53 | 43.0 | 3.50e-01 | 92.1% | 66.5% |
| 3894207 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.53 | 46.0 | 3.73e-01 | 100.0% | 53.9% |
| 3411605 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.53 | 35.0 | 4.01e-01 | 96.1% | 98.1% |
| 3550970 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.52 | 44.0 | 3.93e-01 | 93.4% | 98.2% |
| 4957188 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 47.0 | 4.08e-01 | 100.0% | 68.7% |
| 3987211 | 5.1.3.134 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_2 | 0.52 | 44.0 | 2.76e-01 | 100.0% | 27.2% |
| 3924597 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.51 | 41.0 | 4.26e-01 | 88.2% | 95.7% |
| 3600810 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.51 | 42.0 | 2.54e-01 | 90.8% | 98.7% |
| 4303954 | 2484.1.1.178 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA+FtsA | 0.51 | 45.0 | 2.93e-01 | 100.0% | 94.5% |
| 4191047 | 2484.1.1.245 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA, PilM_2, FtsA | 0.51 | 45.0 | 2.90e-01 | 100.0% | 94.5% |
| 3829885 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 45.0 | 2.98e-01 | 100.0% | 37.3% |
| 4940521 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.51 | 31.0 | 3.58e-01 | 73.7% | 92.0% |
| 3607735 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.51 | 42.0 | 2.70e-01 | 94.7% | 37.7% |
| 4032204 | 2484.1.1.178 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA+FtsA | 0.51 | 44.0 | 2.85e-01 | 98.7% | 94.0% |
| 3576376 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.51 | 42.0 | 3.03e-01 | 96.1% | 51.2% |
| 4435043 | 2484.1.1.178 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA+FtsA | 0.50 | 44.0 | 2.85e-01 | 98.7% | 93.8% |
| 3172934 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.50 | 40.0 | 2.82e-01 | 92.1% | 64.5% |
D2
medium
residues 191-242