←Back to structures

OM638609.1__UNY41765.1__CPT_Milagro_046__00046

Bact-Vir

OM638609.1__UNY41765.1__CPT_Milagro_046__00046

Identity

Accession:
OM638609 ↗
Kingdom:
phage

Quality

87.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Kayeltresvirus› Burkholderia_phage_Milagro

TaxID: 2924901

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-144
PDB
Domain cluster: rep: CAKLQF020000011.1__CAH1086065.1__SAMEA5780031_02312__00112__D220-344
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06114.20 best Peptidase_M78 39.5 6.30e-10 78.8% 67.2%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7cboA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.59 36.0 3.95e-01 79.5% 73.4%
1k9fA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.55 42.0 4.35e-01 79.5% 100.0%
3suuA02 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.55 39.0 3.83e-01 81.8% 66.9%
2x5rA01 3.30.470.40 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.55 38.0 4.05e-01 71.2% 86.1%
6yhhA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.54 36.0 3.64e-01 79.5% 65.7%
3rcnA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.54 36.0 3.67e-01 80.3% 67.9%
6pv5A01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.54 39.0 4.01e-01 75.0% 85.2%
2v5cA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.54 39.0 3.91e-01 75.8% 85.3%
7wdtA02 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.53 39.0 3.92e-01 78.8% 76.3%
1c7sA02 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.53 39.0 3.98e-01 75.8% 81.1%
4p02B04 3.30.379.30 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › 0.52 44.0 4.10e-01 88.6% 85.5%
5bxrA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.51 37.0 3.67e-01 74.2% 76.6%
4pysA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.51 38.0 3.96e-01 76.5% 85.1%
3tqfA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 35.0 3.32e-01 72.7% 90.3%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2888860 2498.1.1.29 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 0.74 71.0 7.03e-01 100.0% 96.4%
5027686 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.67 54.0 5.22e-01 100.0% 75.3%
3397015 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.64 44.0 4.36e-01 70.5% 89.3%
5057817 2498.1.1.26 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M56 0.64 50.0 4.93e-01 83.3% 77.1%
3956852 2498.1.1.10 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.63 47.0 3.48e-01 83.3% 32.4%
None — 0.63 46.0 4.14e-01 82.6% 56.1%
3739141 2498.1.1.39 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.62 49.0 4.93e-01 83.3% 82.2%
3936153 2498.1.1.39 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.62 51.0 4.93e-01 87.9% 91.3%
2740151 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.60 38.0 3.91e-01 81.8% 65.4%
3509435 2498.1.1.39 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.58 47.0 4.82e-01 87.1% 87.7%
3685324 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.56 52.0 4.63e-01 100.0% 81.0%
11499 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.55 39.0 3.79e-01 81.8% 65.0%
4905521 7584.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins 0.55 31.0 2.99e-01 72.0% 47.3%
119292 3149.1.1.1 ↗ a+b complex topology › Hypothetical protein ORF126 › Hypothetical protein ORF126 › Hypothetical protein ORF126 › ORF126-like 0.55 38.0 3.92e-01 71.2% 79.8%
3829794 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.54 38.0 2.56e-01 71.2% 35.2%
3178600 2498.2.1.4 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 0.54 40.0 3.69e-01 77.3% 90.0%
4807828 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.54 40.0 3.85e-01 86.4% 68.0%
3466041 2006.1.4.37 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › UVB_sens_C 0.53 49.0 4.63e-01 100.0% 91.6%
4970349 2498.2.1.0 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain 0.53 38.0 3.67e-01 84.1% 66.2%
5051737 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.53 45.0 3.91e-01 99.2% 60.0%
4469293 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.52 39.0 3.81e-01 77.3% 79.3%
223611 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.52 38.0 3.83e-01 76.5% 78.3%
2557229 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.52 39.0 3.96e-01 76.5% 80.5%
5049291 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.52 39.0 3.86e-01 81.1% 72.9%
3488689 508.1.1.0 ↗ a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain 0.52 36.0 3.67e-01 97.7% 72.7%
4079706 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.51 39.0 3.84e-01 78.8% 84.3%
4051075 2498.2.1.2 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_67N 0.51 39.0 3.95e-01 80.3% 94.6%
1297384 2498.2.1.1 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b 0.51 38.0 3.98e-01 77.3% 85.2%
3990711 2498.2.1.4 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 0.51 39.0 3.63e-01 78.8% 84.4%
4358744 2498.2.1.4 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 0.51 37.0 3.47e-01 76.5% 85.5%
3397067 2498.2.1.4 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 0.51 38.0 3.42e-01 78.0% 67.8%
3272543 2498.2.1.4 ↗ mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glycohydro_20b2 0.50 38.0 3.62e-01 78.8% 97.4%
3622981 2008.1.1.27 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.50 36.0 2.69e-01 75.8% 90.4%
D2 high residues 147-200
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 58.0 5.46e-01 100.0% 62.5%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 4.62e-01 100.0% 34.1%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 5.65e-01 100.0% 62.0%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 62.0 4.50e-01 100.0% 31.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 54.0 4.86e-01 100.0% 50.7%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 5.47e-01 100.0% 60.3%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 5.36e-01 100.0% 69.0%
4lg3A02 6.10.20.130 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.77 55.0 5.90e-01 88.9% 95.3%
5zr6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.66e-01 100.0% 76.3%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.75 52.0 5.74e-01 96.3% 97.6%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 4.78e-01 100.0% 53.9%
2oi8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.74 56.0 3.79e-01 98.1% 22.2%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 55.0 5.82e-01 100.0% 91.5%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.37e-01 100.0% 69.0%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 53.0 5.58e-01 100.0% 91.5%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 52.0 4.81e-01 100.0% 60.6%
1x2mA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 54.0 5.50e-01 100.0% 83.3%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.71 54.0 4.64e-01 100.0% 51.1%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.70 50.0 4.06e-01 87.0% 41.7%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 52.0 5.53e-01 100.0% 93.6%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.69 59.0 5.27e-01 100.0% 88.6%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.67 58.0 4.22e-01 100.0% 75.5%
2fmlB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.73e-01 94.4% 68.8%
3by6C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 4.37e-01 100.0% 55.8%
1x2nA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 53.0 5.12e-01 100.0% 78.3%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 4.50e-01 96.3% 60.0%
6o9aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.66 58.0 4.16e-01 98.1% 87.4%
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.77e-01 98.1% 79.2%
2l4eA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.65 41.0 4.10e-01 70.4% 61.4%
1vhxB00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.65 44.0 3.25e-01 70.4% 50.0%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 48.0 4.33e-01 100.0% 57.7%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 53.0 4.55e-01 100.0% 56.8%
1pg2A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 53.0 3.29e-01 100.0% 16.5%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.02e-01 100.0% 50.6%
1pulA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 51.0 4.17e-01 92.6% 62.1%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.71e-01 98.1% 89.6%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 53.0 4.04e-01 98.1% 74.4%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 49.0 4.60e-01 100.0% 73.1%
3ltoA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.60 52.0 3.64e-01 100.0% 93.3%
7ae2A01 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.60 50.0 3.88e-01 100.0% 43.8%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.48e-01 100.0% 72.0%
2pmyA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 45.0 4.23e-01 92.6% 79.5%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 49.0 4.59e-01 100.0% 88.2%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 38.0 3.91e-01 96.3% 81.2%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 45.0 4.12e-01 98.1% 78.4%
1tuoA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.53 43.0 3.48e-01 94.4% 88.0%
4hjhA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.53 40.0 3.22e-01 85.2% 88.7%
1x4qA01 1.20.1390.10 Mainly Alpha › Up-down Bundle › PWI domain › PWI domain 0.53 43.0 4.05e-01 100.0% 81.7%
4lunU00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 42.0 2.61e-01 100.0% 15.4%
1rqgA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 41.0 3.02e-01 100.0% 34.1%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 43.0 3.86e-01 100.0% 81.7%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5076076 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.85 65.0 4.97e-01 100.0% 37.5%
4979355 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 67.0 5.32e-01 100.0% 43.6%
4970991 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 66.0 5.03e-01 100.0% 37.6%
5044549 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 66.0 5.43e-01 100.0% 49.5%
4971669 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 67.0 4.83e-01 100.0% 33.1%
3316795 101.1.1.303 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF25896 0.83 61.0 6.06e-01 96.3% 76.4%
4224260 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 62.0 5.11e-01 100.0% 46.3%
4941656 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 64.0 5.59e-01 100.0% 57.5%
4969211 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.80 72.0 4.65e-01 100.0% 23.5%
4997094 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 59.0 4.74e-01 100.0% 42.0%
2077327 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.80 62.0 5.15e-01 100.0% 48.9%
4971409 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 61.0 5.07e-01 100.0% 48.4%
4996181 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 62.0 6.17e-01 100.0% 83.6%
3644787 101.1.2.469 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_AT3G52170 0.78 57.0 5.69e-01 96.3% 76.4%
5001937 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 58.0 5.84e-01 98.1% 81.8%
4982401 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.77 68.0 4.37e-01 100.0% 22.0%
3310491 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 58.0 5.67e-01 96.3% 75.0%
1779586 101.1.2.64 ↗ alpha arrays › HTH › HTH › winged helix domain › Lant_dehydr_N 0.77 61.0 4.80e-01 100.0% 42.3%
4981837 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 61.0 3.54e-01 100.0% 10.2%
4947850 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.28e-01 100.0% 54.3%
3239643 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 59.0 5.59e-01 100.0% 72.3%
4933326 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.75 57.0 4.86e-01 98.1% 51.1%
3707222 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 57.0 5.75e-01 100.0% 81.8%
3413051 101.1.2.248 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.74 59.0 5.64e-01 94.4% 75.4%
4997093 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 5.28e-01 100.0% 60.8%
4999433 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.73 55.0 5.69e-01 98.1% 88.0%
5082787 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.73 56.0 4.63e-01 100.0% 46.0%
3266463 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 60.0 5.97e-01 100.0% 89.1%
3187480 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 62.0 5.81e-01 100.0% 81.4%
3895346 101.1.2.575 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25894 0.73 61.0 4.90e-01 100.0% 47.3%
4406214 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.72 56.0 4.70e-01 100.0% 49.5%
4379527 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.72 55.0 4.82e-01 100.0% 54.1%
4201679 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 56.0 4.86e-01 100.0% 54.1%
3424245 101.1.1.269 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 0.71 55.0 5.35e-01 100.0% 76.7%
1167050 101.1.2.145 ↗ alpha arrays › HTH › HTH › winged helix domain › HHH_4 0.69 60.0 4.45e-01 100.0% 55.9%
3977991 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.69 51.0 4.33e-01 100.0% 49.4%
3970291 101.1.1.217 ↗ alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.68 50.0 5.34e-01 98.1% 95.6%
4300463 101.1.1.217 ↗ alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.68 46.0 5.06e-01 96.3% 97.5%
3606717 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 55.0 5.72e-01 100.0% 98.0%
4394509 2004.1.1.188 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 0.67 58.0 3.85e-01 92.6% 62.2%
4960839 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 57.0 4.74e-01 100.0% 68.0%
3287744 103.12.1.1 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.67 47.0 4.58e-01 79.6% 66.7%
3174920 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.67 44.0 3.86e-01 70.4% 43.5%
3662725 101.1.1.217 ↗ alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.67 50.0 5.00e-01 98.1% 81.8%
4928641 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.66 53.0 4.84e-01 100.0% 65.3%
None — 0.66 56.0 3.89e-01 92.6% 70.6%
3281323 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 57.0 5.75e-01 100.0% 98.2%
4947212 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.65 53.0 4.36e-01 98.1% 49.0%
4982795 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 5.10e-01 96.3% 80.0%
3955872 101.1.2.567 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF222 0.64 58.0 4.17e-01 100.0% 38.0%
3730715 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 50.0 5.01e-01 100.0% 85.5%
1175749 101.1.2.145 ↗ alpha arrays › HTH › HTH › winged helix domain › HHH_4 0.64 53.0 4.69e-01 100.0% 62.8%
3963136 3317.1.1.0 ↗ alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.64 53.0 4.08e-01 100.0% 56.4%
5009557 102.1.2.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase 0.62 54.0 4.91e-01 100.0% 89.3%
3325325 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 56.0 4.87e-01 100.0% 67.5%
3247967 101.1.1.28 ↗ alpha arrays › HTH › HTH › Three-helical HTH › SWIRM 0.59 50.0 4.30e-01 98.1% 61.1%
5030155 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 46.0 4.32e-01 96.3% 68.6%
5036214 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.58 43.0 4.23e-01 96.3% 76.7%
4371931 2004.1.1.191 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.56 49.0 3.41e-01 100.0% 75.7%
4860742 1112.1.1.0 ↗ alpha arrays › MshE c-di-GMP-binding domain › MshE c-di-GMP-binding domain › MshE c-di-GMP-binding domain 0.55 41.0 4.12e-01 100.0% 84.5%
5000777 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.54 45.0 3.89e-01 100.0% 57.4%
5083350 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.50 41.0 3.34e-01 100.0% 50.4%