←Back to structures
OM654375.1__UNY40219.1__KLEP174_gp25__00025
Bact-VirOM654375.1__UNY40219.1__KLEP174_gp25__00025
Identity
- Accession:
- OM654375 ↗
- Kingdom:
- phage
Quality
95.8
mean pLDDT
Taxonomy
TaxID: 2928860
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-113
Domain cluster:
rep: KY940711.1__ARQ95339.1__X__00107__D8-116
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 33.0 | 3.59e-01 | 100.0% | 52.0% |
| 5jqkA03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.71 | 64.0 | 4.40e-01 | 100.0% | 34.5% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.69 | 32.0 | 3.53e-01 | 97.7% | 52.7% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.62 | 48.0 | 4.03e-01 | 98.9% | 48.3% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.62 | 50.0 | 4.07e-01 | 100.0% | 45.9% |
| 2epbA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 30.0 | 3.33e-01 | 98.9% | 63.2% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 41.0 | 3.12e-01 | 98.9% | 32.0% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.57 | 48.0 | 4.67e-01 | 93.2% | 91.9% |
| 5heeA00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.55 | 46.0 | 3.32e-01 | 92.0% | 100.0% |
| 4hlnA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 47.0 | 3.34e-01 | 98.9% | 54.6% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 36.0 | 3.38e-01 | 100.0% | 53.7% |
| 2qzbA00 | 2.60.460.10 | Mainly Beta › Sandwich › protein yfey like fold › protein yfey like domain | 0.54 | 36.0 | 3.13e-01 | 100.0% | 41.4% |
| 3go2A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 37.0 | 3.39e-01 | 80.7% | 53.5% |
| 2hx0A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.54 | 44.0 | 3.91e-01 | 89.8% | 59.8% |
| 1z24A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 39.0 | 3.14e-01 | 79.5% | 36.5% |
| 5tj3A02 | 3.30.1360.150 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 46.0 | 4.22e-01 | 96.6% | 92.2% |
| 3i6eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 36.0 | 3.42e-01 | 79.5% | 61.2% |
| 3kd4A02 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.50 | 44.0 | 3.67e-01 | 100.0% | 61.9% |
| 3u9sE04 | 3.30.700.40 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.50 | 35.0 | 3.20e-01 | 100.0% | 52.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4879702 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.88 | 73.0 | 7.83e-01 | 87.5% | 100.0% |
| 3947887 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.88 | 82.0 | 7.41e-01 | 100.0% | 77.4% |
| 4988107 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.87 | 81.0 | 7.45e-01 | 100.0% | 81.8% |
| 3941521 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.87 | 81.0 | 7.39e-01 | 100.0% | 78.8% |
| 2796410 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.86 | 77.0 | 7.10e-01 | 95.5% | 76.4% |
| 4140244 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.86 | 79.0 | 7.17e-01 | 100.0% | 80.9% |
| 3981113 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.85 | 79.0 | 7.31e-01 | 100.0% | 82.6% |
| 5062717 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.85 | 79.0 | 7.12e-01 | 100.0% | 85.2% |
| 3170447 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.71 | 51.0 | 3.64e-01 | 75.0% | 36.7% |
| 3314422 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.68 | 38.0 | 4.19e-01 | 77.3% | 68.6% |
| 4995606 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 35.0 | 3.47e-01 | 100.0% | 50.0% |
| 4446654 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 29.0 | 3.25e-01 | 94.3% | 51.4% |
| 4927363 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.64 | 34.0 | 3.64e-01 | 72.7% | 58.7% |
| 4985735 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.62 | 31.0 | 3.07e-01 | 100.0% | 43.2% |
| 3427966 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 30.0 | 3.56e-01 | 98.9% | 66.7% |
| 3365937 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.61 | 29.0 | 3.47e-01 | 100.0% | 65.0% |
| 5030515 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.59 | 34.0 | 3.10e-01 | 100.0% | 43.5% |
| 3838219 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 31.0 | 3.17e-01 | 100.0% | 51.8% |
| 3966821 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 38.0 | 4.35e-01 | 100.0% | 96.7% |
| 5047682 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.58 | 33.0 | 3.02e-01 | 100.0% | 41.7% |
| 4649416 | 330.6.1.0 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain | 0.58 | 41.0 | 4.25e-01 | 89.8% | 77.6% |
| 4442508 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.58 | 44.0 | 2.93e-01 | 80.7% | 35.7% |
| 5030516 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.57 | 33.0 | 3.15e-01 | 100.0% | 47.6% |
| 3286982 | 330.6.1.0 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain | 0.57 | 48.0 | 4.55e-01 | 97.7% | 77.9% |
| 3429075 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.56 | 28.0 | 3.01e-01 | 98.9% | 53.3% |
| 4643530 | 304.131.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phosphonoacetate hydrolase insertion domain › Phosphonoacetate hydrolase insertion domain | 0.56 | 50.0 | 4.62e-01 | 97.7% | 98.2% |
| 3368743 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.54 | 28.0 | 3.27e-01 | 98.9% | 70.0% |
| 4998774 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.54 | 41.0 | 2.67e-01 | 84.1% | 47.4% |
| 3267948 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 44.0 | 2.56e-01 | 94.3% | 67.1% |
| 3276496 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 42.0 | 2.48e-01 | 94.3% | 73.3% |
| 4469998 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.51 | 41.0 | 2.93e-01 | 96.6% | 41.2% |
| 3560835 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.51 | 32.0 | 2.21e-01 | 100.0% | 16.5% |
| 5014419 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.51 | 44.0 | 3.34e-01 | 98.9% | 52.9% |
| 146744 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.50 | 44.0 | 3.68e-01 | 100.0% | 62.7% |