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OM654377.1__UNY40333.1__KLEP7_gp197__00197
Bact-VirOM654377.1__UNY40333.1__KLEP7_gp197__00197
Identity
- Accession:
- OM654377 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Taxonomy
TaxID: 2928862
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-152_207-277
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.81 | 78.0 | 5.70e-01 | 100.0% | 66.7% |
| 1r1rA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.80 | 76.0 | 5.63e-01 | 100.0% | 88.6% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.79 | 76.0 | 5.26e-01 | 100.0% | 72.8% |
| 5macA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.64 | 45.0 | 3.88e-01 | 99.5% | 46.2% |
| 2oejA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.63 | 43.0 | 3.95e-01 | 99.5% | 52.1% |
| 2q0qA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.58 | 42.0 | 4.30e-01 | 96.3% | 74.9% |
| 1kfwA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 51.0 | 4.29e-01 | 100.0% | 80.4% |
| 4g6uA02 | 3.40.1350.110 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 34.0 | 4.15e-01 | 84.9% | 97.8% |
| 3h16B00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.54 | 30.0 | 3.73e-01 | 86.3% | 86.1% |
| 1vypX00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 49.0 | 4.19e-01 | 100.0% | 76.2% |
| 3alfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 48.0 | 4.45e-01 | 98.2% | 78.1% |
| 4mzyA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 39.0 | 4.33e-01 | 99.5% | 99.4% |
| 4k3zA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.50 | 46.0 | 4.09e-01 | 98.2% | 92.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4208725 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.82 | 80.0 | 5.85e-01 | 100.0% | 86.0% |
| 3275621 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.82 | 79.0 | 6.01e-01 | 100.0% | 82.9% |
| 5051775 | 2500.1.1.9 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › RNR-II_ins_dom | 0.82 | 79.0 | 5.85e-01 | 100.0% | 87.1% |
| 4087732 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.81 | 79.0 | 5.79e-01 | 100.0% | 79.4% |
| 3500621 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.80 | 77.0 | 5.63e-01 | 100.0% | 92.3% |
| 2472944 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.80 | 77.0 | 5.91e-01 | 100.0% | 89.6% |
| 4145444 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.80 | 77.0 | 5.61e-01 | 100.0% | 90.7% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.80 | 77.0 | 5.58e-01 | 100.0% | 89.8% |
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.80 | 77.0 | 5.55e-01 | 100.0% | 88.3% |
| 3823652 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.80 | 76.0 | 5.45e-01 | 100.0% | 89.9% |
| 4015532 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.79 | 76.0 | 5.41e-01 | 100.0% | 85.2% |
| 996122 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.79 | 76.0 | 5.38e-01 | 100.0% | 84.7% |
| 5040104 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.79 | 76.0 | 5.58e-01 | 100.0% | 85.9% |
| 4994375 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.78 | 74.0 | 5.52e-01 | 100.0% | 93.2% |
| 3364356 | 2488.1.1.12 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA | 0.74 | 33.0 | 4.41e-01 | 91.3% | 74.4% |
| 3224725 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.62 | 39.0 | 3.93e-01 | 77.6% | 60.9% |
| 3590972 | 2484.1.1.24 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 36.0 | 4.24e-01 | 87.7% | 87.6% |
| 4327395 | 2002.1.1.17 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEPcase | 0.59 | 50.0 | 3.34e-01 | 90.4% | 44.9% |
| 3717654 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.56 | 38.0 | 3.82e-01 | 88.6% | 66.8% |
| 3593365 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 39.0 | 4.20e-01 | 99.1% | 84.3% |
| 4021771 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 43.0 | 3.60e-01 | 90.4% | 47.3% |
| 4346674 | 2002.1.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RuBisCO_large | 0.54 | 45.0 | 3.93e-01 | 98.2% | 59.7% |
| 3667677 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.53 | 44.0 | 3.79e-01 | 87.7% | 90.9% |
| 4604084 | 2002.1.1.177 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEPcase_2 | 0.52 | 48.0 | 3.67e-01 | 99.1% | 99.8% |
| 1005149 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.50 | 46.0 | 4.09e-01 | 98.2% | 92.9% |
D2
high
residues 157-201
Domain cluster:
representative
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.78 | 67.0 | 4.39e-01 | 100.0% | 82.2% |
| 2qeaB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.73 | 63.0 | 4.36e-01 | 100.0% | 76.9% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.72 | 61.0 | 4.47e-01 | 100.0% | 68.0% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 55.0 | 3.90e-01 | 100.0% | 62.3% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.66 | 54.0 | 4.68e-01 | 95.6% | 61.3% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.66 | 55.0 | 4.67e-01 | 97.8% | 60.3% |
| 2a1vA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.65 | 53.0 | 3.84e-01 | 95.6% | 31.2% |
| 5cemA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 55.0 | 4.72e-01 | 97.8% | 63.0% |
| 1g4dA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 50.0 | 4.54e-01 | 95.6% | 84.1% |
| 3v8hC00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.64 | 54.0 | 3.33e-01 | 100.0% | 15.6% |
| 2uv8A06 | 3.30.70.2490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 48.0 | 4.38e-01 | 97.8% | 61.2% |
| 7ovuA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 52.0 | 3.46e-01 | 100.0% | 24.4% |
| 3e54A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 50.0 | 3.52e-01 | 100.0% | 46.5% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.61 | 53.0 | 4.00e-01 | 100.0% | 66.7% |
| 3juwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 50.0 | 3.42e-01 | 95.6% | 25.7% |
| 2fsrA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 50.0 | 3.45e-01 | 97.8% | 26.3% |
| 4z1xA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 50.0 | 3.66e-01 | 100.0% | 37.1% |
| 1r89A04 | 3.30.70.1550 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Archaeal tRNA CCA-adding enzyme catalytic domain | 0.60 | 45.0 | 4.60e-01 | 100.0% | 95.5% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 49.0 | 4.02e-01 | 100.0% | 50.5% |
| 2x24A02 | 2.40.460.10 | Mainly Beta › Beta Barrel › ClpP/crotonase fold › Biotin dependent carboxylase carboxyltransferase | 0.59 | 42.0 | 3.82e-01 | 86.7% | 54.5% |
| 4yhxA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 51.0 | 3.61e-01 | 100.0% | 33.3% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.59 | 46.0 | 4.08e-01 | 100.0% | 57.1% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 3.57e-01 | 93.3% | 53.6% |
| 2ex5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 45.0 | 3.13e-01 | 100.0% | 38.2% |
| 2dpmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 48.0 | 3.37e-01 | 95.6% | 50.3% |
| 1j5uA01 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.58 | 51.0 | 3.78e-01 | 100.0% | 43.6% |
| 4lecA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 47.0 | 3.20e-01 | 100.0% | 24.3% |
| 2kfpA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.57 | 43.0 | 3.21e-01 | 100.0% | 31.2% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.56 | 44.0 | 3.91e-01 | 100.0% | 56.6% |
| 4mtlA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 44.0 | 3.01e-01 | 97.8% | 22.1% |
| 3kdgA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.56 | 46.0 | 3.67e-01 | 100.0% | 45.7% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.55 | 44.0 | 4.06e-01 | 100.0% | 68.7% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.55 | 43.0 | 3.41e-01 | 93.3% | 100.0% |
| 3frhA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 45.0 | 3.04e-01 | 100.0% | 24.0% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 41.0 | 3.18e-01 | 93.3% | 33.1% |
| 4lq0A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 43.0 | 3.24e-01 | 100.0% | 50.7% |
| 7ahbB01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.54 | 40.0 | 3.77e-01 | 91.1% | 66.1% |
| 1weyA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 46.0 | 3.60e-01 | 100.0% | 52.9% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 40.0 | 3.83e-01 | 100.0% | 69.7% |
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 41.0 | 3.04e-01 | 100.0% | 44.1% |
| 3pehA02 | 3.30.70.2140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 44.0 | 4.48e-01 | 97.8% | 100.0% |
| 4b7lA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.49e-01 | 100.0% | 51.0% |
| 1cjaA01 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.53 | 40.0 | 3.04e-01 | 100.0% | 74.7% |
| 5a72A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 40.0 | 3.02e-01 | 100.0% | 43.9% |
| 1qupA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.87e-01 | 97.8% | 72.9% |
| 1je3A01 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.53 | 40.0 | 3.64e-01 | 95.6% | 63.0% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.53 | 41.0 | 3.45e-01 | 97.8% | 62.8% |
| 3qfhA01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.53 | 42.0 | 3.86e-01 | 97.8% | 66.2% |
| 2hiyA01 | 3.30.70.1280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains | 0.52 | 43.0 | 3.58e-01 | 100.0% | 55.7% |
| 3fzqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.52 | 39.0 | 3.15e-01 | 93.3% | 99.1% |
| 4js8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 42.0 | 3.53e-01 | 100.0% | 62.9% |
| 4pwyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 40.0 | 2.55e-01 | 86.7% | 77.2% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 42.0 | 3.02e-01 | 100.0% | 33.9% |
| 2oh1C00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 37.0 | 2.65e-01 | 80.0% | 65.7% |
| 4oloB00 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.51 | 40.0 | 3.46e-01 | 97.8% | 52.4% |
| 5cm2Z00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 35.0 | 2.44e-01 | 73.3% | 32.6% |
| 3fzgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 36.0 | 2.47e-01 | 77.8% | 39.8% |
| 1af5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 38.0 | 3.05e-01 | 100.0% | 53.2% |
| 2fyxA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.51 | 37.0 | 2.70e-01 | 80.0% | 65.4% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.60e-01 | 97.8% | 69.4% |
| 3ajdA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.51 | 38.0 | 3.66e-01 | 95.6% | 75.0% |
| 2cqhA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 42.0 | 3.41e-01 | 97.8% | 51.6% |
| 3slhA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.50 | 38.0 | 2.67e-01 | 100.0% | 90.0% |
| 2ghpA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 42.0 | 3.55e-01 | 100.0% | 64.6% |
| 4xpkA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 38.0 | 2.83e-01 | 91.1% | 29.1% |
| 3hnrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 39.0 | 2.70e-01 | 95.6% | 85.0% |
| 2uvaG11 | 6.10.60.10 | Special › Helix non-globular › Hydrophobic Seed Protein › | 0.50 | 39.0 | 3.81e-01 | 97.8% | 100.0% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4582646 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.73 | 65.0 | 4.94e-01 | 100.0% | 61.0% |
| 6641 | 241.11.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR | 0.65 | 53.0 | 3.90e-01 | 95.6% | 32.8% |
| 5013439 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.64 | 53.0 | 4.18e-01 | 100.0% | 43.0% |
| None | — | 0.64 | 52.0 | 3.41e-01 | 100.0% | 20.0% | |
| 3283289 | 304.163.1.4 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF30808 | 0.64 | 50.0 | 4.50e-01 | 88.9% | 63.1% |
| 3459125 | 304.6.1.2 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › ALO | 0.63 | 54.0 | 3.25e-01 | 100.0% | 14.2% |
| 3944795 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.63 | 53.0 | 3.18e-01 | 100.0% | 12.7% |
| 3350942 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.63 | 54.0 | 3.22e-01 | 100.0% | 13.3% |
| 4479273 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.62 | 53.0 | 3.89e-01 | 100.0% | 36.9% |
| 4626094 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.62 | 51.0 | 3.41e-01 | 95.6% | 22.1% |
| 3941694 | 241.11.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR | 0.62 | 51.0 | 3.81e-01 | 93.3% | 37.3% |
| 1442266 | 7581.1.1.2 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ketoacyl-synt | 0.62 | 47.0 | 2.84e-01 | 97.8% | 10.2% |
| 3285274 | 241.11.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR | 0.62 | 53.0 | 3.95e-01 | 97.8% | 77.4% |
| 3283733 | 304.169.1.3 ↗ | a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WCX | 0.61 | 51.0 | 4.26e-01 | 95.6% | 55.0% |
| 3805802 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.61 | 52.0 | 3.40e-01 | 100.0% | 22.0% |
| 4937054 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 51.0 | 3.99e-01 | 100.0% | 42.9% |
| 11097 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.60 | 50.0 | 3.49e-01 | 97.8% | 27.4% |
| None | — | 0.60 | 49.0 | 3.32e-01 | 100.0% | 42.1% | |
| 3241748 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.60 | 52.0 | 4.89e-01 | 100.0% | 89.1% |
| 3396525 | 327.11.2.20 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH | 0.60 | 49.0 | 4.23e-01 | 95.6% | 69.3% |
| 4395233 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.60 | 47.0 | 3.50e-01 | 100.0% | 33.8% |
| 4678773 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.59 | 50.0 | 4.33e-01 | 100.0% | 60.0% |
| 3792911 | 101.1.2.312 ↗ | alpha arrays › HTH › HTH › winged helix domain › MSC | 0.59 | 48.0 | 3.67e-01 | 95.6% | 59.1% |
| 4984971 | 3501.1.1.0 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 | 0.59 | 48.0 | 4.30e-01 | 100.0% | 62.9% |
| 5062574 | 328.12.1.0 ↗ | a+b two layers › IF3-like › IF3-like domain in Nudix hydrolase › IF3-like domain in Nudix hydrolase | 0.59 | 46.0 | 3.85e-01 | 97.8% | 48.4% |
| 160625 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.59 | 45.0 | 3.13e-01 | 100.0% | 38.2% |
| 3622222 | 101.1.2.164 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 | 0.59 | 44.0 | 4.13e-01 | 93.3% | 76.9% |
| 5030342 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.59 | 45.0 | 3.71e-01 | 95.6% | 43.0% |
| 3615029 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.58 | 50.0 | 4.07e-01 | 100.0% | 68.9% |
| 3251478 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.58 | 47.0 | 3.57e-01 | 100.0% | 37.7% |
| 3829584 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.58 | 47.0 | 4.71e-01 | 97.8% | 100.0% |
| 5010557 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.58 | 49.0 | 3.96e-01 | 95.6% | 47.8% |
| 4109303 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.58 | 49.0 | 4.20e-01 | 100.0% | 60.0% |
| 1697858 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.58 | 48.0 | 3.47e-01 | 100.0% | 33.6% |
| 3608213 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 45.0 | 3.99e-01 | 100.0% | 75.0% |
| 4027999 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.57 | 43.0 | 3.65e-01 | 88.9% | 52.9% |
| 4992865 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.57 | 47.0 | 3.93e-01 | 100.0% | 60.0% |
| 4958040 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.57 | 43.0 | 3.64e-01 | 95.6% | 69.5% |
| 4200948 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.56 | 44.0 | 3.66e-01 | 100.0% | 48.0% |
| 4936721 | 304.24.1.37 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › MCR_C | 0.56 | 45.0 | 4.19e-01 | 100.0% | 72.3% |
| 4995076 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 45.0 | 3.00e-01 | 100.0% | 22.7% |
| 5034569 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.56 | 44.0 | 4.15e-01 | 97.8% | 71.7% |
| 4981848 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.56 | 49.0 | 4.19e-01 | 100.0% | 61.6% |
| 5012030 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.56 | 46.0 | 4.03e-01 | 95.6% | 61.4% |
| 4981701 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.55 | 46.0 | 4.13e-01 | 95.6% | 66.2% |
| 5035014 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.55 | 41.0 | 3.80e-01 | 100.0% | 60.0% |
| 3960456 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.55 | 41.0 | 2.69e-01 | 91.1% | 60.4% |
| 4681241 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.55 | 44.0 | 2.78e-01 | 100.0% | 15.9% |
| 3295535 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.55 | 47.0 | 3.83e-01 | 95.6% | 50.6% |
| 3277862 | 304.120.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st | 0.55 | 46.0 | 4.24e-01 | 97.8% | 73.3% |
| 3699306 | 859.1.1.1 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA | 0.55 | 40.0 | 2.70e-01 | 84.4% | 19.0% |
| 3301800 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.55 | 44.0 | 3.72e-01 | 93.3% | 52.9% |
| 5004231 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.54 | 41.0 | 3.49e-01 | 95.6% | 67.4% |
| 3356352 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.54 | 47.0 | 3.92e-01 | 97.8% | 55.0% |
| 4995849 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.54 | 43.0 | 3.62e-01 | 100.0% | 56.7% |
| 4282418 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.54 | 42.0 | 3.85e-01 | 100.0% | 67.1% |
| 4031179 | 304.7.1.14 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › PPI | 0.54 | 40.0 | 3.62e-01 | 97.8% | 57.1% |
| 3282905 | 4085.2.1.1 ↗ | alpha arrays › RbcX-like › uncharacterized protein LPG2149 › uncharacterized protein LPG2149 › Helicase_C_3 | 0.54 | 40.0 | 3.55e-01 | 97.8% | 89.4% |
| 5013819 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.53 | 42.0 | 3.90e-01 | 97.8% | 69.2% |
| 3562051 | 101.1.2.29 ↗ | alpha arrays › HTH › HTH › winged helix domain › PTS_2-RNA | 0.53 | 40.0 | 3.32e-01 | 97.8% | 53.3% |
| 3357930 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.53 | 41.0 | 3.62e-01 | 93.3% | 58.7% |
| 3403645 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.52 | 39.0 | 3.75e-01 | 95.6% | 73.3% |
| 5043867 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.52 | 42.0 | 3.72e-01 | 100.0% | 64.0% |
| 3644664 | 256.1.1.7 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › DUF7477 | 0.52 | 41.0 | 4.20e-01 | 93.3% | 100.0% |
| 4981529 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.52 | 42.0 | 3.41e-01 | 95.6% | 49.5% |
| 4228350 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.52 | 40.0 | 3.70e-01 | 95.6% | 70.8% |
| 3744728 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.51 | 39.0 | 3.91e-01 | 97.8% | 89.6% |
| 4247432 | 2003.1.5.60 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FmrO | 0.51 | 37.0 | 2.54e-01 | 84.4% | 47.1% |
| 3182249 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.51 | 41.0 | 3.10e-01 | 95.6% | 34.6% |
| 3581967 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.51 | 37.0 | 3.53e-01 | 95.6% | 67.7% |
| 4387157 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.50 | 38.0 | 3.41e-01 | 100.0% | 57.5% |
D3
high
residues 294-388
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sxjB03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.67 | 38.0 | 3.87e-01 | 88.4% | 56.5% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.65 | 38.0 | 3.58e-01 | 97.9% | 47.3% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 39.0 | 4.22e-01 | 100.0% | 70.4% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 44.0 | 4.32e-01 | 70.5% | 100.0% |
| 2oauA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 32.0 | 3.16e-01 | 70.5% | 45.1% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.63 | 46.0 | 4.08e-01 | 76.8% | 95.0% |
| 1huxA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 43.0 | 3.83e-01 | 77.9% | 82.1% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 41.0 | 3.05e-01 | 74.7% | 67.7% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.56 | 41.0 | 3.93e-01 | 75.8% | 74.8% |
| 6elqA01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 39.0 | 3.23e-01 | 72.6% | 57.4% |
| 1io1A01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.56 | 44.0 | 3.65e-01 | 85.3% | 75.7% |
| 6vq6G02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.55 | 40.0 | 3.21e-01 | 76.8% | 72.8% |
| 2olpA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 47.0 | 4.11e-01 | 97.9% | 64.2% |
| 1x2lA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 38.0 | 4.00e-01 | 90.5% | 81.2% |
| 1w36F02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 44.0 | 4.37e-01 | 100.0% | 83.0% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.54 | 40.0 | 4.14e-01 | 76.8% | 83.9% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 43.0 | 4.21e-01 | 84.2% | 84.2% |
| 4hwdD00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.54 | 39.0 | 4.03e-01 | 78.9% | 80.0% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.52 | 39.0 | 3.61e-01 | 76.8% | 70.1% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.52 | 37.0 | 3.05e-01 | 73.7% | 42.9% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.52 | 39.0 | 3.64e-01 | 78.9% | 76.7% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 39.0 | 3.57e-01 | 83.2% | 79.9% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 40.0 | 4.27e-01 | 91.6% | 97.6% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 45.0 | 3.19e-01 | 97.9% | 91.6% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 39.0 | 3.84e-01 | 81.1% | 77.7% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 38.0 | 3.60e-01 | 78.9% | 75.4% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.51 | 31.0 | 3.41e-01 | 81.1% | 76.3% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.50 | 37.0 | 3.93e-01 | 84.2% | 86.0% |
| 2hpsA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.50 | 38.0 | 3.09e-01 | 80.0% | 50.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024245 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.74 | 36.0 | 3.43e-01 | 82.1% | 40.9% |
| 4169745 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.65 | 32.0 | 3.55e-01 | 75.8% | 58.7% |
| 4956930 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 43.0 | 3.20e-01 | 73.7% | 29.2% |
| 1447979 | 3909.1.1.1 ↗ | alpha bundles › NisB C-terminal helical domain › NisB C-terminal helical domain › NisB C-terminal helical domain › Lant_dehydr_C | 0.60 | 50.0 | 4.40e-01 | 91.6% | 74.5% |
| 3317702 | 109.1.1.16 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_6 | 0.58 | 44.0 | 3.69e-01 | 84.2% | 46.7% |
| 3009331 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.56 | 32.0 | 3.42e-01 | 100.0% | 65.1% |
| 3239981 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.56 | 41.0 | 3.39e-01 | 77.9% | 86.2% |
| 4458494 | 3684.1.1.23 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › CA109-like | 0.54 | 45.0 | 3.64e-01 | 88.4% | 98.9% |
| 3670152 | 5069.1.3.24 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › TIC20 | 0.54 | 39.0 | 3.43e-01 | 76.8% | 49.7% |
| 5024277 | 1079.1.1.19 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DUF2162 | 0.53 | 43.0 | 3.51e-01 | 92.6% | 83.5% |
| 3560341 | 4177.1.1.3 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Arfaptin | 0.53 | 38.0 | 2.71e-01 | 73.7% | 58.5% |
| 3941457 | 1203.1.2.3 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › YiaAB | 0.53 | 43.0 | 4.03e-01 | 88.4% | 72.5% |
| 3737296 | 192.2.1.18 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING | 0.53 | 35.0 | 3.19e-01 | 73.7% | 50.0% |
| 3368223 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.52 | 38.0 | 2.94e-01 | 76.8% | 49.8% |
| 4600893 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 38.0 | 2.77e-01 | 75.8% | 34.6% |
| 5051532 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.52 | 37.0 | 3.59e-01 | 86.3% | 64.5% |
| 3685143 | 192.29.1.52 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Anthrone_oxy | 0.52 | 39.0 | 3.32e-01 | 81.1% | 98.2% |
| 3739409 | 3285.1.1.0 ↗ | alpha duplicates or obligate multimers › Alix V domain › Alix V domain › Alix V domain | 0.52 | 35.0 | 2.70e-01 | 100.0% | 33.0% |
| 3502243 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 41.0 | 3.44e-01 | 86.3% | 78.2% |
| 3634797 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.52 | 45.0 | 3.53e-01 | 100.0% | 79.5% |
| 4289721 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.51 | 36.0 | 3.53e-01 | 72.6% | 89.0% |
| 3834805 | 109.3.1.397 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › NPR1_like_C, Ank_2 | 0.51 | 37.0 | 2.62e-01 | 88.4% | 25.4% |
| 3621305 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.51 | 39.0 | 3.39e-01 | 83.2% | 62.0% |
| 3620955 | 6170.1.1.23 ↗ | alpha bundles › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › PRA1 | 0.50 | 38.0 | 3.66e-01 | 87.4% | 69.1% |
| 3290432 | 5086.1.1.184 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF4407 | 0.50 | 34.0 | 3.37e-01 | 82.1% | 66.0% |
| 3579590 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.50 | 38.0 | 3.36e-01 | 80.0% | 91.4% |