←Back to structures
OM654377.1__UNY40365.1__KLEP7_gp20__00020
Bact-VirOM654377.1__UNY40365.1__KLEP7_gp20__00020
Identity
- Accession:
- OM654377 ↗
- Kingdom:
- phage
Quality
79.2
mean pLDDT
Taxonomy
TaxID: 2928862
Cluster
View cluster (17 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-124
Domain cluster:
rep: MN604230.1__QGF21724.1__Sam112_gp20__00020__D22-108
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18352.8 best | Gp138_N | 29.6 | 7.50e-07 | 83.9% | 91.8% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.83 | 53.0 | 6.25e-01 | 93.2% | 90.5% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 38.0 | 4.98e-01 | 85.6% | 86.6% |
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 42.0 | 4.56e-01 | 86.4% | 66.7% |
| 3pqiA01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.72 | 49.0 | 5.82e-01 | 86.4% | 98.8% |
| 2lssA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 42.0 | 5.22e-01 | 87.3% | 95.7% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 39.0 | 4.83e-01 | 85.6% | 85.1% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 45.0 | 4.69e-01 | 88.1% | 68.8% |
| 1k3rA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 34.0 | 4.68e-01 | 89.0% | 98.3% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 39.0 | 4.18e-01 | 89.8% | 67.6% |
| 2qcpX01 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.65 | 39.0 | 4.77e-01 | 87.3% | 94.7% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 35.0 | 4.40e-01 | 80.5% | 92.5% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 43.0 | 4.35e-01 | 89.0% | 70.0% |
| 4pqxA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.61 | 37.0 | 4.51e-01 | 87.3% | 97.3% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 4.69e-01 | 87.3% | 92.2% |
| 1smxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 40.0 | 4.56e-01 | 86.4% | 93.1% |
| 3d3rA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 34.0 | 4.03e-01 | 74.6% | 86.7% |
| 5jpnC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 39.0 | 3.59e-01 | 86.4% | 54.8% |
| 4ifdI02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 45.0 | 4.25e-01 | 92.4% | 71.5% |
| 1pcfA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.54 | 21.0 | 2.72e-01 | 80.5% | 57.6% |
| 2x9aA00 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.54 | 26.0 | 3.36e-01 | 85.6% | 85.2% |
| 1jb3A00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 4.00e-01 | 86.4% | 74.8% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 37.0 | 4.07e-01 | 86.4% | 95.7% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3075885 | 2.1.1.96 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N | 0.84 | 67.0 | 6.90e-01 | 83.1% | 87.4% |
| 3948035 | 2.1.1.96 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N | 0.82 | 76.0 | 6.22e-01 | 99.2% | 57.5% |
| 1731165 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.81 | 53.0 | 6.06e-01 | 96.6% | 88.8% |
| 3232046 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 43.0 | 4.19e-01 | 86.4% | 50.0% |
| 4532614 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.75 | 39.0 | 5.19e-01 | 85.6% | 92.3% |
| 4807965 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.73 | 45.0 | 4.88e-01 | 86.4% | 74.5% |
| 3169095 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.72 | 45.0 | 5.19e-01 | 86.4% | 85.9% |
| 185474 | 2.1.1.96 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N | 0.72 | 49.0 | 5.66e-01 | 86.4% | 93.1% |
| None | — | 0.72 | 42.0 | 5.24e-01 | 87.3% | 95.7% | |
| 4808081 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.72 | 46.0 | 4.81e-01 | 89.0% | 69.1% |
| 4027685 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.72 | 41.0 | 4.88e-01 | 86.4% | 82.5% |
| 3201221 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.72 | 45.0 | 4.75e-01 | 87.3% | 70.5% |
| 4028871 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.72 | 38.0 | 4.73e-01 | 86.4% | 83.6% |
| 3703907 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 39.0 | 5.12e-01 | 85.6% | 98.5% |
| 3613173 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 40.0 | 4.28e-01 | 87.3% | 62.9% |
| 3227102 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 38.0 | 4.71e-01 | 87.3% | 87.1% |
| 3266828 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.69 | 43.0 | 4.39e-01 | 86.4% | 63.5% |
| 4484212 | 2.1.1.100 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 | 0.69 | 41.0 | 4.84e-01 | 88.1% | 84.3% |
| 4237317 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.69 | 36.0 | 4.88e-01 | 88.1% | 100.0% |
| 4990915 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 41.0 | 5.15e-01 | 89.8% | 100.0% |
| 5053567 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.68 | 35.0 | 4.61e-01 | 86.4% | 90.8% |
| 3715789 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 43.0 | 4.28e-01 | 87.3% | 62.5% |
| 4966111 | 2.1.1.378 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26006 | 0.67 | 40.0 | 4.93e-01 | 86.4% | 94.7% |
| 3703130 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 41.0 | 5.06e-01 | 86.4% | 97.3% |
| 5070441 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 40.0 | 4.97e-01 | 89.8% | 100.0% |
| 5024077 | 2.1.1.363 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2101 | 0.65 | 46.0 | 5.08e-01 | 100.0% | 90.5% |
| 4454600 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.65 | 33.0 | 4.13e-01 | 86.4% | 81.4% |
| 3699623 | 2.1.1.43 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 | 0.64 | 38.0 | 3.99e-01 | 89.0% | 63.8% |
| 3591158 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 43.0 | 4.29e-01 | 86.4% | 64.8% |
| 3575571 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 40.0 | 4.60e-01 | 87.3% | 85.9% |
| 3352296 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.64 | 35.0 | 4.46e-01 | 90.7% | 95.4% |
| 4024439 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.64 | 36.0 | 4.41e-01 | 88.1% | 91.4% |
| 3586555 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 40.0 | 4.67e-01 | 86.4% | 89.4% |
| 4928896 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 44.0 | 4.59e-01 | 87.3% | 83.6% |
| 3688447 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.58 | 46.0 | 4.51e-01 | 86.4% | 76.2% |
| 3403112 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 38.0 | 4.19e-01 | 94.1% | 83.2% |
| 3606926 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 43.0 | 4.10e-01 | 88.1% | 67.4% |
| 3611506 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 44.0 | 4.61e-01 | 91.5% | 87.3% |
| 4286148 | 2.3.1.2 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NTR | 0.56 | 41.0 | 3.79e-01 | 87.3% | 59.3% |
| 4026726 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 44.0 | 4.11e-01 | 91.5% | 66.9% |
| 3973473 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 42.0 | 4.64e-01 | 86.4% | 96.8% |
| 3184493 | 2.1.1.59 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 | 0.55 | 46.0 | 4.36e-01 | 89.0% | 75.7% |
| 3489454 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 41.0 | 4.48e-01 | 86.4% | 95.8% |
| 3770846 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.54 | 39.0 | 3.46e-01 | 89.8% | 51.2% |
| 3708593 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 45.0 | 4.61e-01 | 93.2% | 93.0% |
| 3474782 | 2.1.1.67 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 | 0.53 | 41.0 | 3.93e-01 | 90.7% | 71.1% |
| 3567611 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 44.0 | 4.23e-01 | 91.5% | 77.8% |
| 3490327 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 44.0 | 4.29e-01 | 92.4% | 80.8% |
| 4009369 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 40.0 | 4.12e-01 | 89.0% | 82.6% |
| 3402677 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.52 | 24.0 | 3.21e-01 | 83.9% | 84.5% |