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OM654377.1__UNY40473.1__KLEP7_gp160__00160

Bact-Vir

OM654377.1__UNY40473.1__KLEP7_gp160__00160

Identity

Accession:
OM654377 ↗
Kingdom:
phage

Quality

73.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudaeromonas_phage_vB_PpeM__KLEP7

TaxID: 2928862

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-73
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7obmA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.72 60.0 3.92e-01 95.1% 38.8%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.67 50.0 4.42e-01 98.4% 53.7%
3pg4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.63 48.0 3.28e-01 83.6% 89.1%
3gw6D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 3.39e-01 78.7% 73.9%
4umgA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 3.73e-01 100.0% 46.1%
3rghA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 40.0 3.58e-01 96.7% 44.8%
2rckA01 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.60 50.0 3.55e-01 100.0% 88.1%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 45.0 2.85e-01 80.3% 78.0%
2dmcA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 44.0 4.23e-01 100.0% 66.2%
1o7dC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 41.0 3.69e-01 91.8% 50.6%
2kddA00 6.10.140.560 Special › Helix non-globular › Helix Hairpins › 0.58 43.0 4.44e-01 100.0% 86.0%
1f0lA03 2.60.40.700 Mainly Beta › Sandwich › Immunoglobulin-like › Diphtheria toxin, receptor-binding domain 0.57 41.0 3.21e-01 100.0% 32.5%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.57 44.0 3.98e-01 85.2% 97.6%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 3.54e-01 93.4% 61.0%
5os9A00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.54 45.0 3.68e-01 96.7% 48.7%
4emtA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.53 36.0 2.92e-01 72.1% 50.0%
4jzsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 44.0 3.42e-01 100.0% 96.2%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 33.0 3.71e-01 91.8% 83.3%
1wh1A01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 41.0 3.68e-01 88.5% 67.8%
3d2uE01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.52 40.0 3.02e-01 100.0% 30.9%
2iteA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.52e-01 100.0% 95.0%
3jcuB02 3.10.680.10 Alpha Beta › Roll › Photosystem II CP47 reaction center protein › Photosystem II CP47 reaction center protein 0.51 42.0 3.19e-01 100.0% 93.1%
5f67B00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.50 39.0 3.47e-01 90.2% 59.8%
1c4zA02 3.30.2160.10 Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain 0.50 36.0 3.31e-01 80.3% 58.0%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3631820 298.1.1.6 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › G6PD_C 0.66 45.0 2.92e-01 70.5% 69.3%
4947615 3604.1.1.0 ↗ a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain 0.65 53.0 5.27e-01 95.1% 95.4%
3890461 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.64 53.0 3.47e-01 95.1% 50.2%
3476644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 41.0 4.68e-01 77.0% 100.0%
4955348 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.61 51.0 4.68e-01 96.7% 100.0%
4197746 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.59 40.0 3.56e-01 91.8% 49.4%
5000387 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.58 42.0 4.01e-01 100.0% 65.3%
3340649 3926.1.1.0 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D 0.58 49.0 3.70e-01 95.1% 52.7%
3439034 387.1.1.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related 0.56 36.0 3.96e-01 93.4% 97.5%
3714819 593.1.1.0 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like 0.56 42.0 3.06e-01 82.0% 97.9%
3196550 1075.4.1.2 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane_2 0.56 48.0 2.97e-01 100.0% 38.1%
3927342 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 39.0 3.48e-01 100.0% 47.0%
4473615 513.1.1.1 ↗ a+b two layers › Obg GTP-binding protein C-terminal domain-like › Obg GTP-binding protein C-terminal domain › Obg GTP-binding protein C-terminal domain › DUF1967 0.56 41.0 3.74e-01 85.2% 60.6%
3951258 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 44.0 3.38e-01 90.2% 38.7%
4606231 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.55 46.0 4.14e-01 100.0% 87.1%
3251414 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 44.0 3.66e-01 90.2% 53.6%
3935129 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 3.45e-01 90.2% 96.0%
3755628 5001.1.1.5 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.53 43.0 2.82e-01 90.2% 88.5%
4992318 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 38.0 3.37e-01 98.4% 50.5%
3705051 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.52 39.0 3.93e-01 88.5% 92.3%
4939144 1.1.15.6 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › DUF2341 0.51 35.0 3.34e-01 96.7% 57.5%
4816818 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.51 32.0 3.49e-01 96.7% 83.0%
4204596 3744.1.1.1 ↗ a+b two layers › Photosystem II antenna protein PsbB insertion domain › Photosystem II antenna protein PsbB insertion domain › Photosystem II antenna protein PsbB insertion domain › PSII 0.50 41.0 3.46e-01 98.4% 81.7%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 33.0 3.30e-01 90.2% 64.6%