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OM654378.1__UNY40517.1__KLER11_gp84__00084

Bact-Vir

OM654378.1__UNY40517.1__KLER11_gp84__00084

Identity

Accession:
OM654378 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pararheinheimera_phage_vB_PsoM_KLER1-1

TaxID: 2928863

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-123
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 32.0 3.66e-01 84.8% 66.1%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.59 46.0 3.68e-01 86.1% 78.9%
8ouzD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 44.0 3.22e-01 82.3% 95.2%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 27.0 3.34e-01 72.2% 73.3%
2jkbA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.57 41.0 2.68e-01 77.2% 20.2%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 3.76e-01 98.7% 56.8%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 36.0 3.91e-01 91.1% 80.0%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 45.0 3.08e-01 91.1% 35.1%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.55 32.0 3.88e-01 78.5% 100.0%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 41.0 2.73e-01 79.7% 20.2%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.54 43.0 3.88e-01 87.3% 94.5%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 45.0 3.17e-01 96.2% 65.1%
2otrA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.54 41.0 3.96e-01 83.5% 97.8%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.85e-01 100.0% 78.2%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.53 42.0 4.16e-01 93.7% 89.9%
3lbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 42.0 3.22e-01 91.1% 69.1%
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 38.0 3.44e-01 77.2% 92.8%
4blqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.01e-01 92.4% 59.6%
2gzbB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 42.0 3.40e-01 91.1% 93.9%
4j6oA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.52 42.0 3.00e-01 92.4% 88.1%
2gq1A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.51 42.0 3.37e-01 93.7% 77.1%
3hj4A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 43.0 3.63e-01 92.4% 73.3%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4931123 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.61 46.0 4.72e-01 81.0% 92.0%
3455400 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.60 41.0 2.79e-01 79.7% 18.1%
4647654 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.59 49.0 4.30e-01 92.4% 89.2%
4436049 1190.1.1.1 ↗ a+b two layers › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › CsgF 0.59 42.0 3.90e-01 74.7% 63.0%
4015712 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 39.0 2.61e-01 79.7% 15.7%
4626423 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.58 43.0 2.84e-01 78.5% 23.9%
4973139 511.1.1.0 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.58 49.0 3.93e-01 93.7% 69.7%
3228032 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.57 48.0 4.32e-01 92.4% 96.4%
4207211 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.57 48.0 3.91e-01 94.9% 70.3%
3645846 5.1.4.383 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › VPS11_N 0.56 41.0 2.73e-01 78.5% 22.3%
3465992 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 41.0 2.75e-01 78.5% 21.5%
3276059 5.1.4.329 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 0.56 41.0 2.67e-01 79.7% 23.6%
3440727 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 41.0 2.38e-01 78.5% 9.8%
3420430 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.56 47.0 4.00e-01 93.7% 82.2%
3796107 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.54 35.0 3.38e-01 92.4% 56.7%
3340789 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 39.0 2.60e-01 79.7% 25.8%
3246050 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 33.0 3.20e-01 86.1% 53.3%
4311698 241.2.1.6 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › PF26204 0.53 38.0 3.44e-01 94.9% 54.5%
5078569 5.1.3.274 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › ANAPC4_WD40 0.52 39.0 2.88e-01 79.7% 30.0%
5043972 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.52 32.0 3.06e-01 84.8% 50.5%
3810743 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 37.0 2.67e-01 77.2% 31.8%
4977068 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.51 32.0 2.97e-01 83.5% 47.1%
3940690 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 34.0 3.14e-01 86.1% 51.4%
3813307 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 37.0 2.49e-01 78.5% 30.3%
3924724 331.23.1.0 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.51 41.0 4.12e-01 93.7% 91.3%
4006770 5.1.4.64 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YNCE 0.50 37.0 2.49e-01 79.7% 22.9%
3810658 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.50 43.0 3.21e-01 98.7% 55.8%
D2 high residues 400-481
PDB
Domain cluster: rep: MT711888.1__QNJ57363.1__Dolphis_57__00056__D426-506
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.78 32.0 4.00e-01 80.5% 60.8%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 36.0 4.08e-01 90.2% 57.1%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 33.0 3.83e-01 86.6% 57.6%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 33.0 3.57e-01 84.1% 48.6%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 32.0 3.96e-01 84.1% 64.7%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 31.0 3.77e-01 81.7% 60.8%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 33.0 3.76e-01 90.2% 57.8%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 35.0 3.90e-01 90.2% 58.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 29.0 3.65e-01 78.0% 61.7%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 33.0 3.70e-01 90.2% 57.8%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 29.0 3.37e-01 85.4% 54.2%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 29.0 3.36e-01 81.7% 56.1%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 29.0 3.19e-01 81.7% 50.7%
1wfqA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.77e-01 72.0% 93.2%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4574546 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.78 33.0 3.76e-01 80.5% 50.8%
2060211 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 32.0 3.34e-01 84.1% 40.5%
4930180 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 34.0 4.12e-01 91.5% 63.6%
3510526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 34.0 4.08e-01 81.7% 63.6%
4050524 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.74 35.0 3.95e-01 86.6% 56.9%
4966535 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 33.0 3.81e-01 91.5% 56.7%
4043601 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.74 35.0 3.90e-01 86.6% 56.9%
4119533 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.73 35.0 4.07e-01 90.2% 61.7%
4032291 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.73 34.0 3.86e-01 86.6% 56.9%
4425795 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.72 35.0 3.87e-01 86.6% 56.9%
4100221 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.72 35.0 3.88e-01 90.2% 56.9%
4066623 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.72 34.0 3.98e-01 86.6% 61.7%
4434149 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.72 35.0 3.87e-01 90.2% 56.9%
3317544 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.70 34.0 3.76e-01 86.6% 56.9%
3948516 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.70 35.0 3.89e-01 87.8% 60.0%
4934441 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.70 33.0 3.68e-01 90.2% 56.2%
4932460 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.70 34.0 3.82e-01 90.2% 58.7%
3315100 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 36.0 3.95e-01 72.0% 64.6%
4059146 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.65 32.0 3.56e-01 86.6% 56.9%
5050610 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 36.0 3.82e-01 91.5% 61.4%
3216746 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 29.0 3.36e-01 85.4% 58.2%
3253321 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 34.0 3.83e-01 86.6% 72.3%
3205824 5050.1.1.15 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nodulin-like 0.57 51.0 3.66e-01 98.8% 80.9%
3735899 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.57 50.0 3.60e-01 98.8% 80.0%
4108139 389.6.1.0 ↗ few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain 0.51 33.0 2.97e-01 82.9% 47.0%
3933051 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.50 40.0 2.82e-01 87.8% 45.3%
4623221 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.50 42.0 2.96e-01 95.1% 71.8%
D3 high residues 823-938
PDB
Domain cluster: rep: MT711888.1__QNJ57363.1__Dolphis_57__00056__D839-957
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 26.0 3.40e-01 81.0% 69.2%
3vwoA02 2.10.70.40 Mainly Beta › Ribbon › Complement Module; domain 1 › peptidoglycan hydrolase 0.58 26.0 3.46e-01 85.3% 84.3%
6kbyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 42.0 3.01e-01 81.9% 90.9%
1uw0A01 3.30.1740.10 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type 0.53 32.0 3.52e-01 99.1% 71.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282970 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 32.0 3.98e-01 100.0% 98.5%
2056822 101.1.2.213 ↗ alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.55 32.0 3.72e-01 100.0% 84.2%
3343945 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 27.0 2.74e-01 89.7% 48.7%
3781912 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.51 28.0 3.44e-01 87.1% 87.1%
3692353 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.50 28.0 3.50e-01 93.1% 95.4%
D4 medium residues 152-240
PDB
Domain cluster: rep: NC_001609.1__NP_042036.1__P4p06__00006__D121-193
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.69 52.0 5.70e-01 100.0% 98.6%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 33.0 3.51e-01 89.9% 51.9%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.62 41.0 4.38e-01 98.9% 79.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 36.0 4.23e-01 77.5% 87.1%
3oxhA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 33.0 3.03e-01 100.0% 41.2%
1nnvA01 3.10.450.140 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative 0.54 40.0 3.90e-01 78.7% 100.0%
3e29B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 45.0 3.95e-01 92.1% 88.1%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 37.0 3.34e-01 80.9% 52.1%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 3.73e-01 98.9% 67.0%
3owvB00 3.40.570.10 Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A 0.53 40.0 3.05e-01 82.0% 71.4%
1c8uA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 43.0 3.63e-01 89.9% 77.6%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.80e-01 97.8% 78.0%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 32.0 3.46e-01 79.8% 73.2%
4dokA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.52 41.0 3.50e-01 86.5% 88.4%
1vmoA00 2.100.10.20 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Vitelline membrane outer layer protein I (VOMI) 0.52 42.0 3.47e-01 87.6% 71.2%
1pbyB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 39.0 2.66e-01 79.8% 91.7%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 4.06e-01 94.4% 90.8%
1fy7A02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 45.0 3.97e-01 97.8% 68.7%
2py5A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 32.0 2.61e-01 100.0% 29.9%
4ybvA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 43.0 3.90e-01 94.4% 93.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4000622 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.65 43.0 3.92e-01 97.8% 50.0%
3616769 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.65 42.0 4.12e-01 96.6% 61.1%
3855974 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.64 39.0 4.25e-01 91.0% 73.3%
3559960 2006.1.6.66 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 0.63 39.0 4.29e-01 91.0% 78.6%
3988064 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 45.0 5.04e-01 78.7% 100.0%
3515806 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 34.0 2.93e-01 80.9% 36.3%
5043802 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 38.0 3.52e-01 92.1% 52.2%
3253561 213.1.1.19 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 0.57 40.0 3.44e-01 74.2% 52.3%
3262176 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.55 40.0 3.30e-01 82.0% 54.2%
4389194 4058.1.1.1 ↗ a+b three layers › a+b domain in antivirulence factor › a+b domain in antivirulence factor › a+b domain in antivirulence factor › AvrB_AvrC 0.55 41.0 4.00e-01 80.9% 84.0%
5035305 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 41.0 4.39e-01 79.8% 90.0%
5014316 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 45.0 3.76e-01 92.1% 79.4%
3713034 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 43.0 2.85e-01 87.6% 99.5%
3249235 213.1.1.31 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.54 38.0 3.10e-01 73.0% 65.9%
3962944 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.54 44.0 3.76e-01 91.0% 80.0%
3632437 76.1.1.7 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › DUF7600 0.53 36.0 2.89e-01 94.4% 36.0%
4031476 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 47.0 4.46e-01 95.5% 84.5%
4940380 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.53 44.0 3.37e-01 94.4% 80.5%
6918 4058.1.1.1 ↗ a+b three layers › a+b domain in antivirulence factor › a+b domain in antivirulence factor › a+b domain in antivirulence factor › AvrB_AvrC 0.53 40.0 3.85e-01 79.8% 85.0%
3498587 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.53 41.0 3.10e-01 86.5% 70.2%
3794500 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.52 41.0 3.25e-01 84.3% 63.8%
5030013 5.1.4.43 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.52 41.0 2.69e-01 87.6% 21.9%
3589829 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.52 44.0 4.25e-01 100.0% 83.8%
4946190 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 43.0 4.08e-01 94.4% 78.1%
3661724 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 42.0 2.78e-01 89.9% 27.6%
3936953 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 38.0 2.62e-01 79.8% 30.4%
D5 medium residues 241-380
PDB
Domain cluster: rep: NC_029005.2__YP_009217971.1__AVT91_p57__00057__D75-207
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13362.13 best Toprim_3 27.4 5.20e-06 77.1% 96.8%
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6tg6A01 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.78 57.0 6.50e-01 83.6% 100.0%
5gujA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.77 66.0 6.99e-01 97.9% 100.0%
2au3A03 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.76 64.0 6.81e-01 97.9% 100.0%
2n3zA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.75 47.0 5.43e-01 87.9% 87.9%
5vazA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.73 63.0 6.58e-01 97.9% 100.0%
3h04A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.72 66.0 5.24e-01 99.3% 98.2%
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 50.0 5.53e-01 90.7% 93.6%
2o1sB03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 58.0 6.10e-01 96.4% 100.0%
3dc7A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.68 59.0 5.09e-01 92.9% 96.7%
6ouvA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 58.0 5.96e-01 97.1% 96.2%
4k7jA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.67 57.0 4.88e-01 92.1% 88.1%
3ibtA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 60.0 5.36e-01 96.4% 97.4%
7vo4B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 61.0 5.00e-01 97.1% 85.1%
4kxwA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 59.0 6.07e-01 96.4% 100.0%
3h2gA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 59.0 4.69e-01 95.7% 85.7%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 59.0 4.64e-01 95.0% 96.8%
4lhsA02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.66 56.0 5.09e-01 92.9% 97.3%
4lnuB01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.66 56.0 4.57e-01 92.1% 99.2%
1je0C00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.65 57.0 4.86e-01 95.0% 99.6%
5fg3A03 3.40.50.10050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 0.65 48.0 5.18e-01 97.1% 92.2%
4h08A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.65 59.0 5.21e-01 99.3% 99.5%
7zs9401 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.65 51.0 4.35e-01 82.9% 100.0%
4rw0A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.65 54.0 4.96e-01 90.7% 99.5%
4hyqA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.63 52.0 4.38e-01 89.3% 98.7%
2waaA02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.62 53.0 4.63e-01 92.1% 99.1%
2pe3D01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.62 57.0 4.67e-01 100.0% 92.8%
2f48A01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 52.0 4.12e-01 90.7% 61.4%
2exxA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 51.0 4.52e-01 89.3% 84.2%
2csuA03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.61 52.0 4.90e-01 91.4% 96.4%
5kivA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.60 43.0 3.86e-01 72.9% 84.1%
2c4kA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 49.0 4.68e-01 89.3% 97.6%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 39.0 4.04e-01 85.0% 69.6%
6y1xB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 45.0 3.72e-01 81.4% 89.8%
5ywwA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.58 38.0 4.14e-01 78.6% 80.9%
4w5uB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 48.0 3.75e-01 91.4% 79.3%
1f2dA01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 51.0 4.40e-01 98.6% 84.0%
2akoA00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.56 47.0 3.94e-01 91.4% 100.0%
1kamA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 41.0 3.78e-01 76.4% 79.4%
3bg3A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 46.0 3.53e-01 89.3% 51.7%
4h41B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 47.0 3.57e-01 90.7% 67.7%
4c6rA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.55 46.0 4.45e-01 90.7% 99.4%
3eafA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 43.0 4.01e-01 82.1% 82.5%
1ur4A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 48.0 3.48e-01 93.6% 64.0%
1dysA00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.55 47.0 3.59e-01 94.3% 72.8%
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 45.0 4.26e-01 87.9% 99.4%
3c85A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 45.0 4.41e-01 87.1% 90.0%
2y2wC02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 47.0 3.47e-01 93.6% 74.5%
1h7nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 47.0 3.54e-01 93.6% 81.5%
2c13A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 47.0 3.57e-01 94.3% 82.9%
4ywoA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 44.0 3.89e-01 88.6% 94.8%
5xemB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 48.0 4.30e-01 98.6% 88.9%
4cooB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 48.0 4.28e-01 99.3% 83.4%
1nbaB00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.54 45.0 3.73e-01 90.7% 81.0%
3k1dA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 47.0 3.43e-01 96.4% 91.7%
2osxA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 46.0 3.45e-01 93.6% 79.4%
2gn0B01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 48.0 4.13e-01 100.0% 83.9%
3x44A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 48.0 4.38e-01 98.6% 83.9%
3amlA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 46.0 3.26e-01 96.4% 85.1%
3lqyA00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.53 43.0 3.96e-01 87.9% 97.3%
1izjA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 46.0 3.31e-01 95.7% 96.2%
2dskA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 46.0 3.58e-01 94.3% 66.7%
2p3nA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.52 39.0 4.17e-01 78.6% 94.2%
1gjwA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 44.0 2.94e-01 91.4% 71.7%
3hutA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 42.0 4.16e-01 86.4% 88.0%
2vccA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 42.0 3.27e-01 88.6% 91.8%
4oifB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 46.0 3.38e-01 99.3% 85.9%
2ebnA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 44.0 3.47e-01 91.4% 69.5%
3qvqA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.52 44.0 3.61e-01 91.4% 74.9%
2b7nA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 39.0 3.90e-01 82.9% 76.0%
2c0hA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 45.0 3.47e-01 100.0% 89.8%
1wkvA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 43.0 3.82e-01 98.6% 63.4%
2eplX02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.50 43.0 3.35e-01 92.9% 74.8%
3glvA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 37.0 3.94e-01 76.4% 100.0%
2qiwA01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.50 42.0 3.57e-01 90.7% 88.1%
1y0eA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.50 42.0 3.63e-01 91.4% 71.6%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4617834 2006.1.3.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 0.90 84.0 7.71e-01 97.9% 87.4%
3948019 2006.1.3.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 0.90 72.0 7.91e-01 92.9% 100.0%
3511261 2006.1.3.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 0.89 83.0 8.46e-01 98.6% 100.0%
3947600 2006.1.3.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 0.83 73.0 7.49e-01 98.6% 94.8%
4653529 2006.1.3.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.81 62.0 6.90e-01 87.9% 100.0%
4675929 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.80 67.0 7.04e-01 97.1% 97.6%
4185535 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.79 59.0 6.66e-01 90.0% 98.2%
None — 0.79 62.0 6.66e-01 92.9% 95.0%
4579325 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.78 60.0 6.66e-01 88.6% 100.0%
4803443 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.78 60.0 6.43e-01 89.3% 91.7%
3948961 2006.1.3.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 0.78 64.0 6.80e-01 100.0% 95.2%
4946248 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.78 58.0 5.93e-01 95.7% 80.0%
4305698 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.77 65.0 6.82e-01 95.0% 97.6%
4092166 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.77 61.0 6.62e-01 92.1% 97.5%
4041525 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.77 63.0 6.76e-01 92.1% 100.0%
4504313 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.76 64.0 6.76e-01 97.9% 98.4%
4114168 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.74 63.0 6.64e-01 95.0% 99.2%
3510844 2006.1.3.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.73 60.0 6.44e-01 93.6% 99.2%
1407540 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.73 60.0 6.34e-01 97.1% 98.4%
3966687 2006.1.3.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.73 62.0 6.45e-01 97.1% 97.7%
5036881 2007.24.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like 0.72 41.0 5.39e-01 72.1% 100.0%
4249160 2006.1.3.6 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.70 61.0 6.30e-01 95.0% 99.2%
4346160 2007.25.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 › Ribosomal_L1 0.66 45.0 5.10e-01 88.6% 95.0%
3398275 2007.5.1.8 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.66 60.0 5.11e-01 100.0% 94.2%
4013543 2003.1.6.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.66 54.0 4.34e-01 88.6% 99.6%
3741295 7522.1.1.0 ↗ a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.65 55.0 5.68e-01 97.9% 96.9%
3286890 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.65 54.0 4.82e-01 89.3% 81.0%
3838295 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.62 51.0 5.47e-01 90.0% 100.0%
5018598 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.61 52.0 4.55e-01 92.1% 98.1%
5041806 2007.24.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F 0.61 39.0 4.68e-01 91.4% 100.0%
None — 0.60 50.0 4.22e-01 90.7% 77.6%
4031792 2004.1.1.36 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N 0.60 50.0 4.29e-01 90.7% 93.9%
3728107 2004.1.1.60 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI 0.60 49.0 4.38e-01 88.6% 93.0%
3825543 2005.1.1.43 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd 0.60 44.0 4.07e-01 77.1% 87.8%
3948076 2007.3.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.59 52.0 4.92e-01 97.1% 92.9%
3829770 2005.1.1.43 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd 0.59 43.0 3.96e-01 75.0% 93.7%
4944764 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.58 49.0 4.59e-01 90.7% 94.0%
3680038 2005.1.1.43 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd 0.58 45.0 4.06e-01 82.1% 91.1%
4976376 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.57 47.0 3.55e-01 90.0% 77.1%
4416806 7553.1.1.0 ↗ a/b three-layered sandwiches › Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) › Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) › Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) 0.57 45.0 3.40e-01 86.4% 88.0%
3383819 2005.1.1.43 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd 0.57 45.0 4.08e-01 83.6% 89.7%
3650487 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.56 50.0 4.02e-01 98.6% 84.3%
5009451 7574.1.1.7 ↗ a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N 0.56 48.0 4.38e-01 94.3% 80.0%
3332189 2007.9.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR 0.56 46.0 4.61e-01 90.0% 97.9%
3584467 2007.5.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.55 47.0 4.38e-01 92.1% 91.4%
4240117 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.55 45.0 4.20e-01 88.6% 94.2%
4126066 2484.1.1.40 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX 0.55 43.0 4.29e-01 83.6% 95.2%
3406067 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.55 38.0 3.42e-01 87.9% 50.5%
3497045 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.54 38.0 3.47e-01 87.9% 53.2%
1144177 2005.1.1.13 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.54 39.0 3.18e-01 87.1% 40.9%
3354136 2005.1.1.43 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd 0.54 43.0 4.07e-01 83.6% 79.4%
3989712 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 45.0 3.58e-01 91.4% 82.3%
5024297 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.54 45.0 3.40e-01 90.7% 79.4%
4162427 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.54 43.0 4.19e-01 87.1% 100.0%
3972737 2004.1.1.203 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.53 40.0 2.77e-01 80.0% 72.5%
4092947 2002.1.1.22 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ICL 0.53 47.0 3.09e-01 95.7% 56.3%
5005228 2002.1.1.58 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_39 0.53 47.0 3.53e-01 96.4% 72.5%
4946094 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.53 46.0 3.61e-01 94.3% 88.7%
4826516 2002.1.1.8 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase 0.52 42.0 3.73e-01 87.1% 86.7%
4414942 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.52 43.0 4.16e-01 89.3% 96.9%
3594239 2006.1.1.11 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.52 42.0 3.69e-01 85.7% 94.8%
3988728 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.52 44.0 3.35e-01 92.9% 70.1%
5058638 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 47.0 4.02e-01 97.9% 80.0%
5078122 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.52 41.0 3.60e-01 85.0% 82.8%
3812402 2002.1.1.19 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_17 0.52 44.0 3.87e-01 91.4% 88.8%
3937370 2484.5.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.52 38.0 3.86e-01 77.1% 93.6%
3869532 2006.1.4.30 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_TASOR 0.52 42.0 4.24e-01 87.9% 100.0%
5032052 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 46.0 3.95e-01 100.0% 96.4%
3655847 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.50 45.0 4.02e-01 100.0% 95.1%
D6 medium residues 483-536
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 51.0 3.19e-01 72.2% 40.1%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 47.0 3.71e-01 72.2% 90.6%
2n1hA00 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.65 46.0 3.82e-01 74.1% 90.4%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 46.0 2.79e-01 75.9% 28.3%
1qhuA01 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.65 57.0 3.92e-01 98.1% 94.5%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.61 52.0 3.28e-01 100.0% 53.0%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.02e-01 98.1% 95.3%
2k5iA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 45.0 3.98e-01 83.3% 85.9%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 48.0 3.00e-01 100.0% 36.5%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.53 41.0 3.35e-01 90.7% 79.5%
5ixcA01 3.40.1090.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain 0.52 45.0 2.68e-01 100.0% 39.1%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3405718 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.77 54.0 3.45e-01 74.1% 34.7%
3687323 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.70 48.0 4.60e-01 74.1% 96.9%
3205626 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 42.0 2.85e-01 72.2% 28.4%
3211505 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.62 42.0 2.56e-01 72.2% 14.7%
2538976 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.60 52.0 3.25e-01 100.0% 50.8%
5054848 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.60 40.0 3.32e-01 70.4% 55.0%
3896178 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.59 44.0 3.14e-01 81.5% 65.5%
4214410 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.58 41.0 3.78e-01 75.9% 62.7%
3886774 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.54 40.0 2.81e-01 81.5% 71.6%
3616717 5.1.4.407 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, Alsin_RLD 0.54 47.0 2.78e-01 98.1% 91.2%
D7 medium residues 537-724
PDB
Domain cluster: rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u61C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 55.0 5.94e-01 88.3% 87.7%
1in4A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 54.0 6.00e-01 88.3% 96.0%
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 63.0 6.21e-01 99.5% 85.6%
3vkgA17 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 47.0 5.68e-01 80.3% 100.0%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 55.0 6.09e-01 84.6% 100.0%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 53.0 5.86e-01 89.4% 100.0%
1r6bX04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 58.0 5.77e-01 90.4% 95.9%
1fnnA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 56.0 5.86e-01 86.2% 100.0%
4bj1A02 3.40.50.12060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 51.0 5.74e-01 87.2% 100.0%
7jgsG01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 53.0 5.67e-01 84.6% 100.0%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 55.0 5.58e-01 91.5% 98.9%
3vkgA07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 4.55e-01 97.9% 51.7%
2ht1A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 55.0 5.15e-01 90.4% 91.1%
5tshA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 56.0 4.82e-01 93.1% 76.1%
4hutA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 48.0 4.77e-01 78.7% 88.0%
3upuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 5.45e-01 89.9% 100.0%
4ydsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 56.0 5.28e-01 98.9% 95.1%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 51.0 5.03e-01 87.8% 94.4%
2vzoA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 43.0 3.53e-01 73.9% 100.0%
4wiaC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 55.0 5.19e-01 99.5% 95.6%
2ga8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 4.14e-01 91.5% 100.0%
4w7sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 40.0 4.06e-01 70.7% 88.7%
6znpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 47.0 4.55e-01 88.3% 98.6%
2ykgA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 32.0 3.92e-01 85.1% 90.8%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.98e-01 93.6% 95.7%
1rifA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 4.69e-01 89.4% 100.0%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 35.0 3.71e-01 85.1% 71.4%
3huuC02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 35.0 4.08e-01 83.0% 90.2%
3k4hA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 37.0 4.22e-01 84.6% 91.5%
2zq5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 3.37e-01 80.3% 71.2%
5oesA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.54 36.0 4.25e-01 84.6% 100.0%
3c3kA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 37.0 4.18e-01 84.6% 93.5%
1z6aA01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.54 41.0 4.00e-01 88.8% 71.8%
4mwaA00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.53 43.0 3.84e-01 84.6% 95.4%
1tjyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 38.0 4.15e-01 84.0% 90.2%
1ihuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 4.23e-01 94.1% 99.6%
3e3mA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 37.0 4.14e-01 85.1% 93.1%
4bfcA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 33.0 3.31e-01 80.9% 58.5%
2r60A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 30.0 2.93e-01 76.1% 48.4%
6bs3B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 43.0 3.66e-01 87.8% 99.4%
2vedA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 46.0 4.18e-01 94.7% 97.2%
3g68A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.52 37.0 4.15e-01 93.1% 94.5%
3rhfD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 46.0 4.04e-01 95.7% 87.8%
2amlA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.52 37.0 4.14e-01 93.1% 94.6%
7xpcA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 47.0 3.88e-01 97.3% 93.0%
4mqbB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 3.87e-01 78.7% 94.6%
2yogA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 3.95e-01 80.3% 89.3%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 41.0 3.85e-01 83.5% 91.6%
3v9pB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 3.90e-01 80.3% 97.0%
3czpB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 4.30e-01 94.1% 86.9%
4qgsA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 41.0 4.27e-01 83.5% 94.7%
2plrA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 3.87e-01 81.4% 93.4%
5l3qB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 4.01e-01 90.4% 94.1%
6ln3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 39.0 3.86e-01 79.8% 93.1%
1m8pA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 4.06e-01 81.4% 90.2%
1b93B00 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.51 32.0 3.49e-01 72.9% 76.2%
1e9fA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 39.0 3.82e-01 79.8% 88.1%
4hi0E00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 38.0 3.83e-01 79.3% 93.9%
3czqC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 44.0 3.88e-01 95.7% 72.5%
3lv8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 39.0 3.82e-01 80.3% 93.6%
5x4kA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.50 43.0 4.31e-01 91.0% 99.5%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952423 2004.1.1.339 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3631 0.80 76.0 6.66e-01 100.0% 70.9%
4926850 2004.1.1.22 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.80 61.0 6.68e-01 92.6% 94.8%
5064031 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 72.0 5.86e-01 100.0% 55.4%
3993842 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.79 57.0 6.40e-01 87.8% 93.3%
5058121 2004.1.1.1224 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF31144 0.79 70.0 5.86e-01 100.0% 58.3%
5081314 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 69.0 6.08e-01 100.0% 68.1%
5013281 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 71.0 6.08e-01 100.0% 71.2%
4998586 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 62.0 5.98e-01 99.5% 76.7%
3925706 2004.1.1.93 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy 0.75 50.0 6.04e-01 86.7% 100.0%
4931926 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 71.0 5.85e-01 100.0% 66.0%
4994590 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 69.0 6.66e-01 98.4% 95.2%
3945876 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.73 67.0 5.89e-01 100.0% 68.7%
3593283 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 67.0 5.94e-01 98.4% 85.4%
3253892 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.71 64.0 6.33e-01 100.0% 92.3%
None — 0.71 57.0 5.94e-01 87.8% 92.4%
None — 0.70 57.0 5.85e-01 89.4% 88.3%
None — 0.70 57.0 5.94e-01 89.4% 91.4%
4134156 2004.1.1.125 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N 0.70 56.0 6.01e-01 87.2% 97.5%
3622238 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 54.0 5.81e-01 87.8% 93.1%
None — 0.70 56.0 5.99e-01 87.2% 97.5%
None — 0.70 55.0 5.83e-01 86.7% 91.2%
None — 0.70 55.0 5.82e-01 86.7% 91.2%
5056787 2004.1.1.1206 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › BrxC_BrxD 0.70 57.0 5.09e-01 85.6% 96.5%
5039660 2004.1.1.22 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.69 64.0 5.40e-01 97.9% 88.8%
4069782 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 60.0 5.33e-01 97.9% 66.0%
4218663 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 58.0 5.65e-01 89.4% 87.8%
3839304 2004.1.1.153 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.67 57.0 5.53e-01 89.4% 95.7%
3700532 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 53.0 5.76e-01 87.8% 98.7%
4998160 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 60.0 4.77e-01 94.7% 79.2%
3789963 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 60.0 5.52e-01 94.1% 77.0%
3290153 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.67 61.0 6.12e-01 98.4% 96.3%
3959685 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 57.0 5.89e-01 90.4% 96.0%
3957998 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.66 60.0 5.89e-01 97.9% 98.0%
3506784 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.66 53.0 5.08e-01 87.8% 73.5%
3345159 2004.1.1.189 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.66 55.0 5.49e-01 87.8% 92.3%
3597853 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 50.0 5.36e-01 85.6% 90.3%
4416168 2004.1.1.66 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.65 54.0 5.28e-01 85.1% 100.0%
3580698 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.65 56.0 5.72e-01 89.9% 100.0%
3922834 2004.1.1.180 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_6 0.65 57.0 5.65e-01 93.6% 98.5%
4977857 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 58.0 5.19e-01 94.1% 70.4%
3602841 2004.1.1.66 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.65 53.0 5.10e-01 85.6% 92.6%
5062315 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.65 57.0 5.39e-01 92.6% 91.4%
3736049 2004.1.1.366 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.64 54.0 5.02e-01 86.7% 82.2%
4972258 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 52.0 5.45e-01 87.8% 93.5%
3613995 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 56.0 4.35e-01 94.7% 58.8%
3973945 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 53.0 5.12e-01 94.7% 78.1%
3832037 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 50.0 4.28e-01 86.2% 54.3%
3925713 2004.1.1.500 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5, AAA_6 0.63 54.0 4.90e-01 89.9% 73.1%
4646406 2004.1.1.123 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.62 49.0 5.21e-01 89.4% 91.8%
5042410 2004.1.1.152 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KAP_NTPase 0.61 51.0 4.75e-01 87.8% 97.9%
3277906 2004.1.1.239 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SLFN-g3_helicase 0.61 52.0 5.13e-01 89.9% 93.0%
5025126 2004.1.1.790 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_P-loop 0.61 55.0 5.12e-01 96.8% 95.7%
4182861 2004.1.1.123 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.60 52.0 5.00e-01 91.0% 86.5%
4223106 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.60 51.0 4.44e-01 88.8% 92.0%
3725360 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 49.0 4.72e-01 85.6% 83.3%
5056081 2004.1.1.1219 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7504 0.59 55.0 5.46e-01 97.9% 99.5%
3714023 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.59 49.0 4.20e-01 88.3% 76.6%
3705303 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.57 50.0 3.62e-01 93.6% 75.4%
4026028 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.56 47.0 4.20e-01 88.8% 80.0%
4024729 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.55 47.0 4.16e-01 89.9% 81.1%
3482984 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 42.0 3.97e-01 80.3% 84.3%
3581013 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.54 49.0 3.64e-01 97.3% 70.5%
3742109 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.54 39.0 3.60e-01 83.5% 56.0%
3268477 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.54 48.0 3.49e-01 97.3% 73.1%
3241992 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.54 46.0 3.92e-01 93.6% 80.3%
3934984 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.53 47.0 3.60e-01 97.3% 74.1%
3237175 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.53 47.0 4.40e-01 95.2% 94.3%
4971856 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 44.0 3.94e-01 87.8% 84.5%
4030756 2004.1.1.88 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW 0.53 41.0 4.01e-01 80.3% 91.0%
3648436 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.53 47.0 3.58e-01 96.8% 90.1%
None — 0.53 41.0 3.40e-01 81.4% 59.1%
None — 0.53 44.0 4.26e-01 91.5% 88.2%
3591718 2004.1.1.101 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MeaB 0.52 41.0 3.40e-01 81.4% 59.7%
4944398 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.52 45.0 4.33e-01 93.6% 100.0%
4483715 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 40.0 4.17e-01 80.9% 95.6%
3941963 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.52 39.0 4.00e-01 93.6% 80.6%
1307621 2004.1.1.109 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PPK2 0.52 45.0 4.28e-01 95.2% 86.2%
5072252 2004.1.1.79 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin 0.51 39.0 3.83e-01 80.3% 95.1%
5016446 2004.1.1.88 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW 0.51 39.0 3.76e-01 79.8% 86.5%
4016778 2004.1.1.43 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 0.51 44.0 3.83e-01 93.1% 96.6%
4322176 2004.1.1.109 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PPK2 0.51 44.0 3.37e-01 94.1% 45.2%
4927940 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.50 42.0 3.56e-01 89.9% 52.9%
D8 medium residues 725-822
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nqwA01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.64 45.0 4.78e-01 73.5% 89.3%
1ztdA00 1.10.1520.20 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III 0.58 42.0 3.90e-01 76.5% 77.6%
1gq2A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 45.0 3.32e-01 87.8% 80.0%
6wb4B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 40.0 2.83e-01 74.5% 64.6%
4d2dA00 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.51 40.0 2.61e-01 85.7% 89.4%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3960310 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.67 46.0 5.23e-01 70.4% 100.0%
3967936 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.65 46.0 5.17e-01 73.5% 100.0%
4509501 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.64 49.0 4.73e-01 80.6% 85.5%
3288147 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.62 48.0 4.81e-01 82.7% 81.0%
3176974 148.1.3.15 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_assoc_2 0.61 46.0 4.61e-01 83.7% 77.0%
4398165 166.1.1.1 ↗ alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.55 42.0 4.10e-01 83.7% 77.3%
4993041 150.1.1.3 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin 0.52 28.0 3.05e-01 75.5% 62.5%