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OM654378.1__UNY40575.1__KLER11_gp06__00006

Bact-Vir

OM654378.1__UNY40575.1__KLER11_gp06__00006

Identity

Accession:
OM654378 ↗
Kingdom:
phage

Quality

72.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pararheinheimera_phage_vB_PsoM_KLER1-1

TaxID: 2928863

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 24-83
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02831.21 best gpW 41.2 1.60e-10 96.7% 71.2%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.63 49.0 4.19e-01 83.3% 81.9%
4akgA02 1.20.140.100 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain 0.63 54.0 3.81e-01 91.7% 65.5%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.63 43.0 3.42e-01 71.7% 47.1%
3vkgA02 1.20.140.100 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain 0.62 52.0 3.86e-01 91.7% 71.4%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.03e-01 85.0% 60.0%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 43.0 3.53e-01 100.0% 44.7%
3shqA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 46.0 3.11e-01 86.7% 67.3%
5gmdA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.57 51.0 3.84e-01 100.0% 52.1%
4evxA00 1.10.1740.240 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.57 47.0 3.97e-01 90.0% 63.9%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.56 50.0 3.11e-01 100.0% 86.1%
1d8cA03 1.20.1220.12 Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III 0.56 50.0 3.84e-01 100.0% 65.9%
5c9iD01 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.56 42.0 3.20e-01 85.0% 33.5%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 38.0 2.79e-01 70.0% 98.1%
2rc3C00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.56 37.0 2.98e-01 70.0% 41.4%
3ltoA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.55 47.0 3.71e-01 100.0% 56.7%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.66e-01 86.7% 80.0%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 33.0 3.62e-01 71.7% 89.7%
6uczB00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.54 47.0 3.10e-01 100.0% 26.4%
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.54 38.0 3.96e-01 76.7% 89.5%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.53 42.0 3.72e-01 88.3% 87.4%
2d4zA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 42.0 3.06e-01 95.0% 30.8%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.53 40.0 3.07e-01 81.7% 37.1%
1zcdA00 1.20.1530.10 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain 0.52 45.0 2.79e-01 100.0% 74.5%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.51 36.0 3.74e-01 98.3% 80.7%
7rkbA01 3.90.420.10 Alpha Beta › Alpha-Beta Complex › Sulfite Oxidase; Chain A, domain 2 › Oxidoreductase, molybdopterin-binding domain 0.51 44.0 3.48e-01 100.0% 84.2%
5xukA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.51 44.0 3.59e-01 98.3% 82.6%
1vq8R00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.51 44.0 3.27e-01 95.0% 62.7%
4n4nB00 3.90.640.100 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.51 37.0 3.87e-01 83.3% 85.7%
2jmlA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.51 38.0 3.49e-01 81.7% 95.1%
2gu0A02 3.30.428.20 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain 0.51 35.0 2.70e-01 76.7% 39.0%
3gr3A00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.50 46.0 3.07e-01 100.0% 58.8%
1r8eA02 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.50 36.0 3.40e-01 76.7% 75.3%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3599017 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.71 57.0 4.08e-01 86.7% 49.4%
4410759 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.70 57.0 4.51e-01 86.7% 47.0%
3630462 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.69 56.0 4.18e-01 86.7% 40.0%
3783976 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.69 56.0 4.81e-01 86.7% 62.2%
4029803 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.68 55.0 4.24e-01 86.7% 42.3%
5060418 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.68 56.0 4.34e-01 86.7% 45.0%
4025655 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.68 55.0 4.66e-01 86.7% 57.9%
5000789 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.67 55.0 4.45e-01 86.7% 54.3%
3244401 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.67 54.0 4.33e-01 86.7% 46.1%
3718200 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.67 54.0 4.20e-01 86.7% 48.0%
3933404 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.67 53.0 4.05e-01 90.0% 37.3%
3229643 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.66 54.0 4.22e-01 86.7% 45.0%
3785619 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.66 55.0 4.24e-01 86.7% 73.9%
4025072 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.64 53.0 4.19e-01 88.3% 77.4%
4463557 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.64 50.0 4.32e-01 86.7% 55.8%
3931606 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.63 52.0 4.08e-01 86.7% 73.9%
3538408 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.63 49.0 4.29e-01 86.7% 55.8%
3771989 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.63 49.0 3.92e-01 90.0% 41.5%
3414119 101.1.2.113 ↗ alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 0.62 53.0 4.05e-01 100.0% 90.7%
4086368 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.60 47.0 3.27e-01 86.7% 85.3%
3675938 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.59 41.0 3.83e-01 75.0% 63.7%
3509891 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.58 45.0 2.81e-01 86.7% 67.5%
3403813 603.2.1.12 ↗ alpha bundles › STAT-like › STAT › STAT › 7tm_7 0.58 49.0 3.01e-01 93.3% 91.9%
3710532 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 46.0 3.97e-01 90.0% 62.9%
4123155 3236.1.1.5 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_antiport_1 0.58 44.0 2.72e-01 86.7% 58.6%
4560971 3567.1.1.90 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PFF1_TM 0.57 45.0 2.87e-01 90.0% 70.0%
4027679 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 42.0 3.64e-01 88.3% 53.3%
3589866 101.1.2.66 ↗ alpha arrays › HTH › HTH › winged helix domain › Mga 0.55 38.0 3.42e-01 85.0% 51.8%
4506965 3567.1.1.90 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PFF1_TM 0.55 48.0 3.08e-01 100.0% 59.7%
3818560 109.4.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G 0.53 46.0 3.26e-01 98.3% 54.9%
5064344 7584.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.53 39.0 2.97e-01 80.0% 83.2%
3919983 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.53 41.0 2.65e-01 83.3% 87.2%
3458208 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.53 47.0 3.33e-01 98.3% 96.1%
5069295 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.53 42.0 3.32e-01 95.0% 44.1%
4928786 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.52 42.0 2.82e-01 86.7% 25.1%
3601525 603.1.1.176 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF5393 0.51 45.0 2.97e-01 100.0% 63.4%
4966839 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 44.0 3.71e-01 96.7% 81.9%
4948577 282.1.1.1 ↗ a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.51 37.0 2.70e-01 83.3% 26.3%
3647625 7581.1.1.39 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C, FAE1_CUT1_RppA 0.50 44.0 3.07e-01 100.0% 50.0%