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OM654379.1__UNY40663.1__KLEB271_gp109__00109

Bact-Vir

OM654379.1__UNY40663.1__KLEB271_gp109__00109

Identity

Accession:
OM654379 ↗
Kingdom:
phage

Quality

73.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-90
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7sxqA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 41.0 2.90e-01 93.9% 23.8%
2o3oA01 2.40.128.690 Mainly Beta › Beta Barrel › Lipocalin › YycH protein, domain 3-like 0.54 43.0 3.91e-01 92.7% 87.6%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.91e-01 91.5% 76.0%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 30.0 3.40e-01 78.0% 80.4%
3wx1A00 2.170.150.20 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. 0.51 43.0 4.00e-01 93.9% 75.0%
4gn1C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 3.61e-01 95.1% 67.3%
3loyA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 42.0 3.84e-01 93.9% 67.5%
2k5tA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 36.0 3.18e-01 82.9% 48.4%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 43.0 3.20e-01 95.1% 68.2%
1na6A01 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.51 40.0 3.22e-01 87.8% 96.5%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.77e-01 87.8% 79.8%
4pz7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 42.0 3.61e-01 95.1% 65.0%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929071 330.10.1.1 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO 0.62 40.0 3.91e-01 98.8% 60.0%
3509053 216.1.1.17 a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C 0.61 37.0 3.22e-01 90.2% 38.5%
2387861 330.18.1.1 a+b two layers › dsRBD-like › Anti-CRISPR protein AcrIIA6 › Anti-CRISPR protein AcrIIA6 › AcrIIA6 0.60 46.0 4.45e-01 82.9% 87.1%
3237781 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.59 39.0 4.25e-01 73.2% 84.6%
3430820 1.1.1.20 beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N 0.57 45.0 3.01e-01 89.0% 28.9%
3784861 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.57 46.0 4.04e-01 91.5% 76.2%
3736612 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 37.0 3.66e-01 81.7% 67.1%
4208450 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 30.0 3.33e-01 80.5% 70.0%
5018175 243.3.1.37 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF4901 0.54 42.0 4.08e-01 89.0% 74.7%
3786814 5.1.2.20 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT 0.53 43.0 2.72e-01 90.2% 22.8%
3176049 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.53 33.0 3.57e-01 97.6% 73.9%
4444614 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 37.0 3.75e-01 98.8% 73.8%
4951631 243.3.1.37 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF4901 0.53 40.0 3.69e-01 89.0% 60.0%
3607724 220.1.1.92 beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.53 45.0 3.89e-01 95.1% 90.0%
3462747 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.53 40.0 3.12e-01 84.1% 67.0%
3695360 7579.1.1.40 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › T6SS_Tle1-like_cat 0.53 41.0 2.58e-01 81.7% 45.3%
4438762 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.52 40.0 4.01e-01 89.0% 83.5%
4142588 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.51 37.0 2.84e-01 75.6% 42.7%
146272 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.51 37.0 3.77e-01 89.0% 78.3%
3236742 2484.1.1.233 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1280 0.51 41.0 2.80e-01 89.0% 28.1%
4119667 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.51 39.0 3.89e-01 87.8% 82.4%
3387388 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.50 41.0 3.64e-01 93.9% 60.8%