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OM681334.1__UNJ22046.1__X__00006
Bact-VirOM681334.1__UNJ22046.1__X__00006
Identity
- Accession:
- OM681334 ↗
- Kingdom:
- phage
Quality
83.4
mean pLDDT
Taxonomy
TaxID: 2924883
Cluster
View cluster (116 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-48
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xgqb01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.84 | 74.0 | 5.54e-01 | 100.0% | 62.4% |
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.74 | 57.0 | 4.32e-01 | 87.2% | 44.2% |
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 60.0 | 5.81e-01 | 100.0% | 95.5% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 48.0 | 4.24e-01 | 74.4% | 53.3% |
| 1ed7A00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.69 | 51.0 | 5.01e-01 | 87.2% | 93.3% |
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.69 | 51.0 | 4.93e-01 | 87.2% | 79.2% |
| 3k3sH01 | 2.30.130.110 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.67 | 53.0 | 4.33e-01 | 94.9% | 76.8% |
| 1aiwA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.67 | 50.0 | 4.40e-01 | 84.6% | 75.8% |
| 4g6iC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 53.0 | 4.21e-01 | 100.0% | 42.6% |
| 2pliA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.67 | 55.0 | 4.43e-01 | 100.0% | 78.6% |
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.66 | 54.0 | 4.76e-01 | 100.0% | 68.3% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.66 | 49.0 | 4.64e-01 | 87.2% | 74.5% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 49.0 | 4.00e-01 | 82.1% | 63.0% |
| 4m1xD00 | 3.30.1360.240 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.64 | 45.0 | 3.80e-01 | 82.1% | 41.7% |
| 4g6iB01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 53.0 | 4.24e-01 | 100.0% | 46.1% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.64 | 47.0 | 4.02e-01 | 87.2% | 53.4% |
| 3kw2A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.63 | 51.0 | 4.45e-01 | 97.4% | 72.1% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 49.0 | 4.01e-01 | 100.0% | 52.7% |
| 2oaiA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.63 | 53.0 | 4.30e-01 | 100.0% | 77.5% |
| 2i7xA02 | 3.40.50.10890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 46.0 | 3.00e-01 | 82.1% | 32.4% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 49.0 | 3.93e-01 | 100.0% | 42.2% |
| 2o3gA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.61 | 48.0 | 4.07e-01 | 100.0% | 89.5% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.60 | 48.0 | 3.81e-01 | 100.0% | 47.1% |
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.60 | 47.0 | 3.86e-01 | 100.0% | 81.6% |
| 2zo4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 48.0 | 2.99e-01 | 94.9% | 58.7% |
| 7razA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 44.0 | 3.57e-01 | 87.2% | 42.4% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 43.0 | 3.36e-01 | 87.2% | 83.3% |
| 2dy3D01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.57 | 44.0 | 3.33e-01 | 100.0% | 35.0% |
| 5yycA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.57 | 43.0 | 3.21e-01 | 100.0% | 32.6% |
| 3oo2A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.56 | 43.0 | 3.10e-01 | 100.0% | 28.7% |
| 3hiaA00 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.55 | 41.0 | 3.64e-01 | 94.9% | 51.5% |
| 3co8A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.55 | 42.0 | 3.05e-01 | 100.0% | 29.1% |
| 2zzeA03 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.54 | 42.0 | 3.36e-01 | 97.4% | 50.0% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.53 | 41.0 | 2.96e-01 | 100.0% | 30.9% |
| 3hurA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.51 | 40.0 | 2.81e-01 | 100.0% | 26.7% |
| 3o46A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 39.0 | 3.34e-01 | 100.0% | 96.4% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 38.0 | 3.56e-01 | 100.0% | 88.5% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022524 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.88 | 79.0 | 6.42e-01 | 100.0% | 74.3% |
| 4930420 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.88 | 78.0 | 6.39e-01 | 100.0% | 74.3% |
| 3981632 | 70.4.1.9 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement_2 | 0.84 | 70.0 | 7.03e-01 | 100.0% | 95.0% |
| 4945988 | 284.4.1.3 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_C | 0.77 | 66.0 | 6.18e-01 | 100.0% | 84.0% |
| 4935174 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.77 | 66.0 | 6.39e-01 | 100.0% | 86.7% |
| 4965660 | 284.4.1.1 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF | 0.76 | 66.0 | 6.11e-01 | 100.0% | 80.0% |
| 4928950 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.75 | 64.0 | 5.98e-01 | 100.0% | 84.0% |
| 5047208 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.75 | 63.0 | 5.75e-01 | 100.0% | 76.4% |
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.74 | 56.0 | 5.29e-01 | 87.2% | 82.0% |
| 5042477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 52.0 | 4.98e-01 | 79.5% | 64.4% |
| 1322863 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.74 | 56.0 | 5.42e-01 | 87.2% | 91.3% |
| 3971347 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.74 | 56.0 | 5.02e-01 | 87.2% | 72.4% |
| 1322862 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.74 | 56.0 | 5.33e-01 | 87.2% | 87.5% |
| 4307941 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.74 | 55.0 | 4.96e-01 | 87.2% | 88.1% |
| 4978928 | 284.4.1.1 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF | 0.73 | 63.0 | 6.04e-01 | 100.0% | 91.1% |
| 4110715 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.72 | 55.0 | 4.90e-01 | 87.2% | 71.2% |
| 4933883 | 284.4.1.1 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF | 0.72 | 62.0 | 5.76e-01 | 100.0% | 84.0% |
| 4960332 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.72 | 61.0 | 4.91e-01 | 100.0% | 51.2% |
| 3972100 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.71 | 54.0 | 4.70e-01 | 87.2% | 60.0% |
| 4948029 | 284.4.1.3 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_C | 0.71 | 60.0 | 5.61e-01 | 100.0% | 84.0% |
| 4026053 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.70 | 50.0 | 5.06e-01 | 79.5% | 85.0% |
| 5058704 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.70 | 59.0 | 5.52e-01 | 100.0% | 88.0% |
| 1694867 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.70 | 53.0 | 4.89e-01 | 87.2% | 83.0% |
| 5039642 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.70 | 58.0 | 4.84e-01 | 100.0% | 88.0% |
| 3773541 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.70 | 52.0 | 3.05e-01 | 82.1% | 10.8% |
| 5039487 | 284.4.1.1 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF | 0.69 | 58.0 | 5.45e-01 | 100.0% | 84.0% |
| 3664930 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.69 | 54.0 | 3.83e-01 | 92.3% | 34.1% |
| 4934433 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.69 | 58.0 | 5.29e-01 | 100.0% | 85.5% |
| 4996605 | 70.3.1.12 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 | 0.69 | 54.0 | 4.46e-01 | 94.9% | 78.8% |
| 5026481 | 64.3.1.3 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 | 0.68 | 51.0 | 4.86e-01 | 87.2% | 74.0% |
| 4956395 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.68 | 59.0 | 5.31e-01 | 100.0% | 85.5% |
| 3558025 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.68 | 52.0 | 3.04e-01 | 84.6% | 10.9% |
| 3976685 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.68 | 51.0 | 4.73e-01 | 87.2% | 85.2% |
| 3619978 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.68 | 50.0 | 2.97e-01 | 84.6% | 10.4% |
| 4009008 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.68 | 50.0 | 4.64e-01 | 87.2% | 87.3% |
| 5015989 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.67 | 57.0 | 5.20e-01 | 100.0% | 83.6% |
| 4959996 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.67 | 57.0 | 5.31e-01 | 100.0% | 86.0% |
| 4444075 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.67 | 50.0 | 4.95e-01 | 87.2% | 88.4% |
| 5002569 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.67 | 56.0 | 5.29e-01 | 100.0% | 84.0% |
| 1685099 | 1.1.7.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NeqB_N | 0.67 | 50.0 | 4.55e-01 | 100.0% | 59.3% |
| 5035867 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.67 | 56.0 | 5.12e-01 | 100.0% | 85.5% |
| 4950806 | 4.6.1.8 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr | 0.66 | 57.0 | 5.13e-01 | 100.0% | 81.8% |
| 4454722 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.65 | 53.0 | 4.36e-01 | 100.0% | 83.7% |
| 4989083 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.64 | 52.0 | 4.79e-01 | 100.0% | 78.2% |
| 1291025 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.64 | 47.0 | 4.02e-01 | 87.2% | 53.4% |
| 3936760 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.62 | 52.0 | 4.05e-01 | 97.4% | 66.7% |
| 4241370 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.62 | 51.0 | 4.20e-01 | 100.0% | 81.2% |
| 4961832 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.62 | 50.0 | 4.16e-01 | 100.0% | 82.5% |
| 4966144 | 3454.1.1.9 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › PF26687 | 0.62 | 49.0 | 4.24e-01 | 97.4% | 94.3% |
| 80910 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.61 | 50.0 | 4.06e-01 | 100.0% | 82.6% |
| 3582045 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.61 | 44.0 | 4.50e-01 | 89.7% | 91.4% |
| 4074370 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.60 | 49.0 | 4.09e-01 | 100.0% | 83.7% |
| 3857417 | 1.1.2.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF29595 | 0.60 | 48.0 | 4.07e-01 | 100.0% | 85.3% |
| 5028252 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.58 | 45.0 | 3.61e-01 | 100.0% | 87.0% |
| 3931939 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.58 | 42.0 | 3.53e-01 | 89.7% | 42.7% |
| 3746407 | 5.1.5.64 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DCAF17 | 0.58 | 44.0 | 2.55e-01 | 87.2% | 29.6% |
| 3934737 | 229.1.1.10 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF29595 | 0.57 | 44.0 | 3.89e-01 | 97.4% | 90.0% |
| 3740654 | 1.1.7.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C | 0.57 | 43.0 | 3.28e-01 | 100.0% | 34.4% |
| 3505002 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.55 | 40.0 | 4.07e-01 | 89.7% | 97.1% |
| 4927893 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.54 | 42.0 | 2.68e-01 | 97.4% | 49.8% |
| 4354167 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.54 | 39.0 | 3.20e-01 | 79.5% | 48.8% |
| 3402542 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.53 | 39.0 | 3.33e-01 | 84.6% | 64.0% |
| 3479505 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.53 | 40.0 | 2.90e-01 | 100.0% | 38.7% |
| 3390825 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.53 | 36.0 | 3.15e-01 | 71.8% | 55.4% |
| 3806939 | 2.1.1.105 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NMD3_OB | 0.52 | 39.0 | 3.26e-01 | 100.0% | 90.5% |
| 3861624 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.52 | 42.0 | 3.07e-01 | 100.0% | 44.8% |
| None | — | 0.51 | 42.0 | 2.72e-01 | 100.0% | 26.0% |
D2
high
residues 51-106
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09956.16 best | Phage_cement_2 | 51.0 | 2.30e-13 | 100.0% | 54.4% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c5eA00 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.83 | 75.0 | 6.22e-01 | 100.0% | 61.1% |
| 6xgqb01 | 2.40.300.10 | Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D | 0.80 | 72.0 | 6.05e-01 | 100.0% | 64.5% |
| 1v5vA03 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.70 | 54.0 | 4.92e-01 | 100.0% | 62.7% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.68 | 51.0 | 4.52e-01 | 100.0% | 54.7% |
| 1uz5A04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.65 | 56.0 | 5.25e-01 | 100.0% | 93.1% |
| 3girA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.63 | 48.0 | 4.38e-01 | 100.0% | 61.5% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 46.0 | 4.12e-01 | 100.0% | 56.5% |
| 1g8lA04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.60 | 50.0 | 4.67e-01 | 100.0% | 100.0% |
| 1wu2A04 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.60 | 50.0 | 4.61e-01 | 100.0% | 90.9% |
| 8bveA03 | 2.40.340.10 | Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV | 0.56 | 44.0 | 4.24e-01 | 100.0% | 98.6% |
| 2aaaA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 35.0 | 2.90e-01 | 100.0% | 36.3% |
| 2mamA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.10e-01 | 80.4% | 72.0% |
| 7xoiP01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 31.0 | 2.83e-01 | 78.6% | 37.7% |
| 1f60A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 42.0 | 3.57e-01 | 100.0% | 61.1% |
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.36e-01 | 96.4% | 90.1% |
| 1zunB03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 41.0 | 3.52e-01 | 100.0% | 59.4% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083172 | 70.4.1.9 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement_2 | 0.94 | 81.0 | 8.31e-01 | 91.1% | 100.0% |
| 3981037 | 70.4.1.9 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement_2 | 0.94 | 87.0 | 8.79e-01 | 100.0% | 100.0% |
| 5083817 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.83 | 75.0 | 7.10e-01 | 98.2% | 100.0% |
| 5002645 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.81 | 73.0 | 7.21e-01 | 98.2% | 96.6% |
| 4988093 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.81 | 74.0 | 5.92e-01 | 100.0% | 67.3% |
| 2808420 | 70.4.1.1 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › HDPD | 0.80 | 71.0 | 5.70e-01 | 100.0% | 53.2% |
| 2640772 | 70.4.1.1 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › HDPD | 0.80 | 72.0 | 5.91e-01 | 100.0% | 60.0% |
| 2559744 | 70.4.1.2 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr | 0.78 | 66.0 | 6.53e-01 | 100.0% | 88.1% |
| 5033307 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.77 | 69.0 | 5.13e-01 | 100.0% | 43.6% |
| 3945811 | 70.4.1.7 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › XM1_gp53_minor_capsid | 0.77 | 66.0 | 6.51e-01 | 96.4% | 95.0% |
| 3513462 | 70.4.1.8 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement | 0.77 | 67.0 | 6.57e-01 | 100.0% | 96.7% |
| 5083816 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.75 | 67.0 | 6.23e-01 | 100.0% | 92.9% |
| 5002644 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.74 | 64.0 | 5.85e-01 | 98.2% | 94.7% |
| 3820836 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.70 | 55.0 | 4.83e-01 | 100.0% | 57.6% |
| 3516152 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.67 | 58.0 | 5.10e-01 | 100.0% | 92.9% |
| 5030835 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.67 | 58.0 | 5.09e-01 | 100.0% | 88.2% |
| 3398750 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.66 | 57.0 | 5.15e-01 | 100.0% | 95.0% |
| 4975521 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.66 | 56.0 | 4.98e-01 | 100.0% | 90.6% |
| 3205316 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.65 | 56.0 | 4.89e-01 | 100.0% | 93.3% |
| 4956897 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.65 | 57.0 | 5.09e-01 | 100.0% | 92.5% |
| 4617493 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.65 | 57.0 | 5.10e-01 | 100.0% | 92.5% |
| 2526359 | 70.4.1.2 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr | 0.64 | 55.0 | 5.43e-01 | 100.0% | 93.3% |
| 4930449 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.64 | 53.0 | 4.89e-01 | 96.4% | 94.7% |
| 3515518 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.62 | 52.0 | 4.14e-01 | 100.0% | 48.0% |
| 3576729 | 375.1.1.146 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CCCH_Mcm10 | 0.61 | 42.0 | 4.24e-01 | 73.2% | 98.2% |
| 2984229 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.60 | 49.0 | 4.56e-01 | 100.0% | 92.3% |
| 3574854 | 375.1.1.267 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mcm10, zf-CCCH_Mcm10 | 0.58 | 40.0 | 3.58e-01 | 73.2% | 63.5% |
| 4960949 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.58 | 47.0 | 4.35e-01 | 100.0% | 91.3% |
| 3603211 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.58 | 47.0 | 4.35e-01 | 100.0% | 88.7% |
| 4248967 | 325.1.7.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › NQRA | 0.56 | 49.0 | 4.17e-01 | 100.0% | 71.6% |
| 3169532 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.55 | 37.0 | 2.16e-01 | 71.4% | 71.4% |
| 4950769 | 3987.1.1.0 ↗ | a+b complex topology › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain | 0.55 | 44.0 | 3.74e-01 | 96.4% | 78.1% |
| 4514735 | 1049.2.1.4 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J | 0.54 | 40.0 | 2.94e-01 | 100.0% | 25.3% |
| 3267585 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.54e-01 | 100.0% | 62.9% |