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OM687511.1__UNI71475.1__X__00043
Bact-VirOM687511.1__UNI71475.1__X__00043
Identity
- Accession:
- OM687511 ↗
- Kingdom:
- phage
Quality
61.7
mean pLDDT
Taxonomy
TaxID: 2924716
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-51
D2
medium
residues 52-140
Domain cluster:
rep: OQ469755.1__WEV89103.1__FADCJLBI_00051__00051__D21-95
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 56.0 | 5.42e-01 | 92.1% | 82.8% |
| 2r0rB00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.63 | 50.0 | 5.23e-01 | 85.4% | 100.0% |
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.63 | 49.0 | 4.36e-01 | 91.0% | 57.3% |
| 4gbjC02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.61 | 48.0 | 4.18e-01 | 92.1% | 54.8% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 35.0 | 3.95e-01 | 98.9% | 73.2% |
| 2cvzA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.57 | 44.0 | 3.90e-01 | 92.1% | 56.1% |
| 2q24A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 46.0 | 3.79e-01 | 95.5% | 59.0% |
| 2np5D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 46.0 | 3.90e-01 | 96.6% | 70.3% |
| 4gzrB00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.55 | 35.0 | 3.78e-01 | 100.0% | 75.3% |
| 2nx4C00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 42.0 | 3.45e-01 | 87.6% | 60.4% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 35.0 | 3.64e-01 | 100.0% | 72.3% |
| 2yukA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.53 | 33.0 | 3.38e-01 | 85.4% | 62.2% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.53 | 41.0 | 3.74e-01 | 87.6% | 62.8% |
| 2pbiA02 | 1.10.1240.60 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.52 | 37.0 | 3.56e-01 | 73.0% | 73.3% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.52 | 33.0 | 3.61e-01 | 100.0% | 78.4% |
| 3kflA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.52 | 44.0 | 3.56e-01 | 95.5% | 68.6% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.51 | 45.0 | 4.01e-01 | 98.9% | 75.0% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 35.0 | 3.52e-01 | 94.4% | 69.9% |
| 2oeeA00 | 1.20.1500.10 | Mainly Alpha › Up-down Bundle › YheA-like fold › YheA/YmcA-like | 0.51 | 34.0 | 3.43e-01 | 83.1% | 67.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081313 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.80 | 56.0 | 5.66e-01 | 74.2% | 72.2% |
| 3343513 | 192.8.1.268 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CemA | 0.69 | 42.0 | 4.04e-01 | 100.0% | 52.9% |
| 4325032 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.68 | 38.0 | 3.00e-01 | 95.5% | 28.0% |
| 3600017 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.68 | 37.0 | 3.37e-01 | 100.0% | 41.7% |
| 3866648 | 174.1.1.43 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 | 0.67 | 39.0 | 3.15e-01 | 98.9% | 31.9% |
| 3206514 | 192.2.1.6 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_3 | 0.64 | 55.0 | 4.90e-01 | 100.0% | 66.2% |
| 4984330 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.64 | 49.0 | 4.91e-01 | 82.0% | 82.2% |
| 3280363 | 150.5.1.11 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › T7SS_ESX_EspC | 0.61 | 38.0 | 3.76e-01 | 100.0% | 58.9% |
| 3708190 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.59 | 47.0 | 3.33e-01 | 87.6% | 36.4% |
| 3686667 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 41.0 | 4.28e-01 | 73.0% | 82.5% |
| 4447436 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.59 | 50.0 | 3.57e-01 | 97.8% | 59.0% |
| 55560 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.58 | 46.0 | 4.43e-01 | 92.1% | 74.5% |
| 3240453 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 37.0 | 3.57e-01 | 100.0% | 58.0% |
| 3944587 | 101.1.4.26 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DNA_meth_N | 0.57 | 34.0 | 3.78e-01 | 78.7% | 74.3% |
| 3730934 | 605.1.1.207 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Tmemb_170 | 0.55 | 42.0 | 3.53e-01 | 100.0% | 47.7% |
| 5008364 | 5069.1.1.26 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › NrfD | 0.55 | 41.0 | 3.62e-01 | 80.9% | 60.7% |
| 3823640 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.53 | 44.0 | 4.10e-01 | 92.1% | 81.7% |
| 5047567 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.52 | 45.0 | 3.53e-01 | 95.5% | 61.6% |
| 3482273 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.51 | 36.0 | 3.34e-01 | 97.8% | 58.7% |
| 3934927 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 36.0 | 3.50e-01 | 100.0% | 65.0% |
| 3467691 | 150.5.1.76 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › DUF1110 | 0.51 | 37.0 | 3.86e-01 | 100.0% | 82.4% |
| 3967307 | 601.33.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD | 0.50 | 43.0 | 3.80e-01 | 94.4% | 100.0% |
| 2841860 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.50 | 45.0 | 3.86e-01 | 100.0% | 82.5% |