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UTU47201.1

Arc-Vir

OM716001__UTU47201.1__X__00002

Identity

Accession:
OM716001 ↗
Protein ID:
UTU47201.1 ↗
Kingdom:
archaea

Quality

81.0 mean pLDDT

Taxonomy

TaxID: 2964733

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-41
PDB
Domain cluster: representative
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.98 90.0 6.14e-01 100.0% 33.3%
2ba3A01 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.96 77.0 8.05e-01 87.5% 96.6%
1b01A00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.96 85.0 7.71e-01 100.0% 74.4%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 78.0 5.57e-01 87.5% 34.6%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 73.0 5.20e-01 87.5% 32.6%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 70.0 5.62e-01 84.4% 45.0%
4ch7A01 1.10.10.2890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.91 76.0 5.07e-01 100.0% 25.9%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 71.0 5.37e-01 87.5% 38.9%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 71.0 5.63e-01 87.5% 44.4%
1xwyA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.90 78.0 4.51e-01 100.0% 12.3%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 70.0 5.86e-01 87.5% 51.9%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 70.0 5.70e-01 87.5% 48.3%
3gg7A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.89 76.0 4.47e-01 100.0% 13.2%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 67.0 5.25e-01 84.4% 40.3%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 69.0 5.17e-01 87.5% 36.4%
6l25A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.88 75.0 4.39e-01 100.0% 12.5%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 67.0 4.59e-01 84.4% 26.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 66.0 4.33e-01 84.4% 20.9%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 63.0 5.67e-01 81.2% 56.5%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 66.0 4.92e-01 87.5% 34.1%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 64.0 5.00e-01 84.4% 38.0%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 69.0 4.88e-01 93.8% 30.9%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 67.0 6.03e-01 90.6% 61.7%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 69.0 5.72e-01 93.8% 52.7%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 63.0 5.27e-01 84.4% 46.6%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 68.0 5.26e-01 93.8% 42.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 62.0 5.07e-01 84.4% 42.9%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 63.0 4.10e-01 84.4% 19.6%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 67.0 5.02e-01 93.8% 37.2%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 62.0 5.04e-01 84.4% 42.9%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 4.78e-01 84.4% 37.0%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 60.0 4.98e-01 84.4% 43.5%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 4.93e-01 84.4% 40.9%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 65.0 5.27e-01 96.9% 46.3%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 5.20e-01 93.8% 46.0%
4e4yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.80 68.0 4.02e-01 100.0% 28.5%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 60.0 4.45e-01 93.8% 31.8%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 60.0 5.48e-01 90.6% 61.7%
1rm6D04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.79 60.0 3.62e-01 96.9% 12.3%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 61.0 4.89e-01 93.8% 42.3%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 5.44e-01 84.4% 66.7%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.69e-01 84.4% 42.2%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.11e-01 84.4% 27.6%
3rd8A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.78 56.0 4.85e-01 81.2% 48.1%
3dkqA02 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.78 52.0 4.55e-01 71.9% 46.8%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.27e-01 96.9% 56.9%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.76 52.0 3.53e-01 71.9% 53.8%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 55.0 4.17e-01 84.4% 31.8%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 4.28e-01 84.4% 35.5%
1eyvB00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.75 63.0 4.25e-01 100.0% 24.1%
1kblA04 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.75 58.0 3.35e-01 93.8% 10.2%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 57.0 5.17e-01 90.6% 61.7%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 4.35e-01 84.4% 40.3%
2rhcA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.72 55.0 3.31e-01 93.8% 11.7%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.09e-01 84.4% 35.5%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.70 57.0 4.64e-01 96.9% 47.8%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.69 56.0 4.16e-01 93.8% 34.4%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.26e-01 84.4% 48.1%
4h15A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 56.0 3.33e-01 100.0% 27.2%
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.66 55.0 3.54e-01 100.0% 46.9%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.66 56.0 3.83e-01 100.0% 63.6%
1nh2B00 1.10.287.100 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 49.0 4.47e-01 84.4% 63.0%
1nvpB00 1.10.287.100 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 49.0 4.51e-01 84.4% 67.4%
1pixA03 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.65 53.0 3.15e-01 100.0% 66.9%
7ymiD01 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.65 50.0 3.05e-01 84.4% 55.0%
4hhxA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.64 54.0 3.84e-01 93.8% 30.8%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.64 47.0 4.50e-01 87.5% 68.3%
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.59 46.0 4.23e-01 93.8% 66.7%
1vhxB00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.59 49.0 3.19e-01 93.8% 58.0%
7d1tA01 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.54 46.0 2.91e-01 100.0% 72.0%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4058428 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 1.00 92.0 7.47e-01 100.0% 58.2%
3289234 101.1.11.30 alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH 0.99 86.0 8.84e-01 93.8% 100.0%
4632125 101.1.11.30 alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH 0.99 90.0 6.77e-01 100.0% 45.7%
4928595 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.99 90.0 6.03e-01 100.0% 30.5%
4375217 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.96 81.0 5.90e-01 93.8% 37.5%
4972395 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.96 78.0 6.55e-01 87.5% 56.0%
3286839 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.96 85.0 6.46e-01 100.0% 45.7%
2771700 101.1.11.11 alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1778 0.95 85.0 6.05e-01 100.0% 36.8%
3250116 101.1.12.11 alpha arrays › HTH › HTH › HTH motif inserted in other structures › Swi5 0.95 71.0 6.90e-01 81.2% 74.3%
5074175 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.94 75.0 6.35e-01 87.5% 56.0%
3245973 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.92 75.0 4.12e-01 93.8% 6.7%
4363711 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.91 76.0 4.59e-01 93.8% 15.4%
4951511 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.91 76.0 6.70e-01 100.0% 64.0%
2081534 101.1.11.2 alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 0.91 77.0 5.93e-01 96.9% 44.3%
3955892 101.1.11.2 alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 0.90 76.0 6.67e-01 100.0% 64.0%
3969664 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.89 70.0 5.41e-01 87.5% 41.2%
3259221 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.89 71.0 5.85e-01 93.8% 50.0%
3274484 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.88 70.0 5.39e-01 93.8% 40.0%
4394509 2004.1.1.188 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 0.87 71.0 4.28e-01 90.6% 15.0%
5011906 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.86 69.0 5.93e-01 96.9% 56.4%
3463111 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.85 63.0 5.22e-01 84.4% 45.0%
5081457 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.85 65.0 6.62e-01 90.6% 93.3%
None 0.85 66.0 3.72e-01 93.8% 8.2%
3485420 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.84 66.0 5.51e-01 93.8% 50.0%
4978071 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.84 65.0 3.71e-01 90.6% 8.9%
5001070 1076.1.1.1 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like 0.82 69.0 4.04e-01 100.0% 11.6%
4970991 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 4.02e-01 93.8% 24.8%
3399413 243.7.1.0 a+b two layers › Cystatin-like › Cytochrome b5-like heme/steroid binding domain › Cytochrome b5-like heme/steroid binding domain 0.72 58.0 4.35e-01 96.9% 34.4%
3504836 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.72 59.0 3.66e-01 100.0% 59.0%
3446122 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 56.0 5.46e-01 93.8% 82.9%
3287705 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.71 53.0 3.20e-01 84.4% 12.2%
4379527 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.68 52.0 4.00e-01 93.8% 36.5%
4941209 604.39.1.3 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS 0.68 54.0 3.55e-01 100.0% 63.7%
3271267 568.1.1.0 few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related 0.67 52.0 4.19e-01 93.8% 45.0%
3278996 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 55.0 3.96e-01 96.9% 35.0%
4625373 101.1.1.20 alpha arrays › HTH › HTH › Three-helical HTH › CPSF_A 0.66 52.0 3.76e-01 93.8% 28.2%
5079692 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.65 52.0 3.69e-01 96.9% 29.6%
4021421 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 58.0 3.19e-01 100.0% 32.9%
3651379 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 54.0 3.56e-01 100.0% 45.0%