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OM728296.1__WCS68090.1__Goe26_01780__00178
Bact-VirOM728296.1__WCS68090.1__Goe26_01780__00178
Identity
- Accession:
- OM728296 ↗
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Taxonomy
TaxID: 3026977
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-68
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.72 | 54.0 | 4.67e-01 | 81.2% | 77.0% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 55.0 | 4.61e-01 | 92.2% | 99.1% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 48.0 | 3.57e-01 | 78.1% | 32.3% |
| 4h4nA00 | 2.60.40.3750 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 47.0 | 4.83e-01 | 100.0% | 80.6% |
| 6x3aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 48.0 | 4.09e-01 | 81.2% | 60.6% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 59.0 | 4.90e-01 | 100.0% | 90.4% |
| 4y6iA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 56.0 | 4.72e-01 | 100.0% | 91.3% |
| 2cpyA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 46.0 | 4.31e-01 | 81.2% | 98.8% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.59 | 44.0 | 3.38e-01 | 81.2% | 45.4% |
| 8hi1E01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 41.0 | 3.77e-01 | 75.0% | 69.0% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.59 | 43.0 | 3.18e-01 | 79.7% | 38.6% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 51.0 | 4.41e-01 | 98.4% | 94.9% |
| 2ahuA01 | 3.40.1080.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase | 0.58 | 40.0 | 2.65e-01 | 70.3% | 94.5% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.56 | 48.0 | 3.58e-01 | 100.0% | 37.8% |
| 3mdnD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 44.0 | 3.18e-01 | 98.4% | 39.0% |
| 1imhC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.32e-01 | 78.1% | 55.7% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.53 | 37.0 | 3.66e-01 | 75.0% | 100.0% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 44.0 | 4.22e-01 | 100.0% | 92.1% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.52 | 43.0 | 3.42e-01 | 92.2% | 65.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.72 | 54.0 | 5.10e-01 | 79.7% | 100.0% |
| 4033537 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.69 | 62.0 | 4.21e-01 | 100.0% | 97.0% |
| 4180988 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.68 | 61.0 | 4.11e-01 | 100.0% | 97.5% |
| 4654177 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.68 | 61.0 | 4.07e-01 | 100.0% | 97.1% |
| 4463006 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.67 | 43.0 | 4.94e-01 | 73.4% | 93.3% |
| 4962335 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.64 | 52.0 | 5.27e-01 | 93.8% | 90.8% |
| 3969321 | 11.1.1.213 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PhoD_N | 0.64 | 49.0 | 4.16e-01 | 82.8% | 55.2% |
| 4929030 | 304.5.1.1 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › P-II | 0.63 | 57.0 | 4.75e-01 | 100.0% | 100.0% |
| 4620910 | 10.32.1.183 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM87A-B_GOLD | 0.61 | 45.0 | 3.36e-01 | 78.1% | 79.4% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.60 | 45.0 | 4.73e-01 | 100.0% | 96.4% |
| 3392899 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.59 | 45.0 | 3.17e-01 | 82.8% | 37.1% |
| 3528856 | 3444.2.1.5 ↗ | alpha arrays › DP domain › XPC-binding domain and DDI helical domain › XPC-binding domain › LMF1_C | 0.59 | 51.0 | 4.17e-01 | 100.0% | 76.0% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 42.0 | 4.54e-01 | 78.1% | 100.0% |
| 4961356 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.59 | 48.0 | 3.80e-01 | 90.6% | 44.4% |
| 3279732 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.59 | 47.0 | 3.96e-01 | 90.6% | 73.9% |
| 3210904 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.57 | 48.0 | 3.87e-01 | 98.4% | 74.8% |
| 3926687 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.56 | 46.0 | 3.85e-01 | 100.0% | 50.8% |
| 5075731 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.55 | 40.0 | 3.42e-01 | 78.1% | 53.3% |
| 3726900 | 11.1.1.642 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 | 0.53 | 39.0 | 3.37e-01 | 81.2% | 63.6% |
| 2529893 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.53 | 38.0 | 3.72e-01 | 76.6% | 100.0% |
| 3426937 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 38.0 | 2.34e-01 | 81.2% | 18.3% |
| 3239822 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 42.0 | 3.54e-01 | 96.9% | 72.3% |
| 5027645 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.52 | 43.0 | 2.98e-01 | 98.4% | 41.9% |