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OM728303.1__WCS69777.1__Goe25_01490__00144
Bact-VirOM728303.1__WCS69777.1__Goe25_01490__00144
Identity
- Accession:
- OM728303 ↗
- Kingdom:
- phage
Quality
69.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Grisebachstrassevirus›
Bacillus_phage_vB_BsuM-Goe25
TaxID: 3026984
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 106-178
Domain cluster:
rep: OR475272.1__WNM67085.1__SEA_SCHOMBER_64__00064__D3-92
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01807.26 best | Zn_ribbon_DnaG | 30.0 | 4.90e-07 | 94.5% | 50.0% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d0qA00 | 3.90.580.10 | Alpha Beta › Alpha-Beta Complex › DNA Primase; Chain A › Zinc finger, CHC2-type domain | 0.87 | 74.0 | 6.55e-01 | 94.5% | 65.7% |
| 1nuiA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.76 | 39.0 | 4.95e-01 | 84.9% | 86.0% |
| 5flxf00 | 6.20.50.150 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.61 | 33.0 | 3.38e-01 | 87.7% | 50.7% |
| 1vwxp00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 39.0 | 3.64e-01 | 86.3% | 54.9% |
| 2dk6A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.58 | 38.0 | 3.55e-01 | 94.5% | 53.2% |
| 2p12A01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.57 | 46.0 | 3.59e-01 | 89.0% | 74.5% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.02e-01 | 74.0% | 85.3% |
| 1ujrA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.54 | 37.0 | 3.62e-01 | 98.6% | 63.9% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 38.0 | 3.55e-01 | 95.9% | 59.8% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.53 | 48.0 | 3.67e-01 | 100.0% | 69.9% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 44.0 | 3.89e-01 | 93.2% | 85.5% |
| 1k8iA01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.52 | 37.0 | 3.64e-01 | 100.0% | 71.4% |
| 3v1vA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 44.0 | 2.90e-01 | 94.5% | 38.2% |
| 4dqlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.52 | 47.0 | 3.61e-01 | 100.0% | 70.2% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.39e-01 | 86.3% | 57.1% |
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.50 | 35.0 | 3.24e-01 | 95.9% | 55.1% |
| 4gbmA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 46.0 | 3.05e-01 | 100.0% | 31.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3274279 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.91 | 68.0 | 6.45e-01 | 78.1% | 72.9% |
| 4680318 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.88 | 77.0 | 7.12e-01 | 95.9% | 75.6% |
| 3772921 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.88 | 64.0 | 5.65e-01 | 75.3% | 65.0% |
| 8015 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.87 | 74.0 | 6.55e-01 | 94.5% | 65.7% |
| 4260807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.87 | 62.0 | 6.32e-01 | 74.0% | 82.9% |
| 4539347 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.86 | 74.0 | 6.62e-01 | 95.9% | 68.0% |
| 4166935 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.80 | 66.0 | 5.99e-01 | 94.5% | 67.0% |
| 5003468 | 375.1.1.15 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 | 0.79 | 66.0 | 5.81e-01 | 90.4% | 68.6% |
| 4023805 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 69.0 | 6.56e-01 | 94.5% | 81.2% |
| 3412674 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 57.0 | 5.30e-01 | 76.7% | 77.8% |
| 4995759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 66.0 | 6.39e-01 | 94.5% | 85.0% |
| 3576759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 52.0 | 5.38e-01 | 74.0% | 75.7% |
| 4940785 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 64.0 | 5.51e-01 | 94.5% | 76.5% |
| 3928378 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 52.0 | 4.99e-01 | 74.0% | 62.4% |
| 3056107 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 61.0 | 5.35e-01 | 93.2% | 71.4% |
| 3590274 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 60.0 | 5.57e-01 | 94.5% | 76.7% |
| 3943026 | 375.1.1.39 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Prim_Zn_Ribbon | 0.68 | 56.0 | 4.93e-01 | 91.8% | 61.5% |
| 3261011 | 375.1.1.85 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Auto_anti-p27 | 0.64 | 39.0 | 4.45e-01 | 83.6% | 88.0% |
| 4639076 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 49.0 | 4.58e-01 | 94.5% | 65.3% |
| 3337215 | 4357.1.1.6 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_5 | 0.60 | 40.0 | 3.86e-01 | 98.6% | 60.0% |
| 4474519 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.58 | 32.0 | 3.48e-01 | 71.2% | 63.3% |
| 3704287 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.57 | 38.0 | 4.02e-01 | 87.7% | 78.5% |
| 3877833 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.56 | 39.0 | 3.82e-01 | 97.3% | 66.3% |
| 3598119 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.56 | 32.0 | 3.32e-01 | 74.0% | 57.1% |
| 4559071 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.55 | 31.0 | 3.32e-01 | 72.6% | 60.0% |
| 3361215 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.55 | 32.0 | 3.43e-01 | 72.6% | 66.7% |
| 3241448 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 45.0 | 3.98e-01 | 93.2% | 80.9% |
| 3407058 | 220.1.1.28 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › hSac2 | 0.54 | 46.0 | 3.53e-01 | 97.3% | 88.3% |
| 3786106 | 4357.1.1.3 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_2 | 0.54 | 38.0 | 3.37e-01 | 74.0% | 61.9% |
| 4400376 | 295.1.1.12 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0231 | 0.54 | 37.0 | 3.36e-01 | 75.3% | 53.6% |
| 3874262 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.53 | 41.0 | 3.62e-01 | 97.3% | 55.5% |
| 4001570 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.52 | 31.0 | 3.07e-01 | 72.6% | 54.7% |
| 3566388 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 27.0 | 3.22e-01 | 72.6% | 79.1% |