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OM728304.1__WCS70090.1__Goe27_02120__00207
Bact-VirOM728304.1__WCS70090.1__Goe27_02120__00207
Identity
- Accession:
- OM728304 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Grisebachstrassevirus›
Bacillus_phage_vB_BsuM-Goe27
TaxID: 3026985
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-113
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oevA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.65 | 42.0 | 3.74e-01 | 76.1% | 47.1% |
| 3s6gA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 39.0 | 3.61e-01 | 79.6% | 47.9% |
| 2imqX00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 42.0 | 3.25e-01 | 85.0% | 92.1% |
| 2xhcA01 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.51 | 34.0 | 3.69e-01 | 96.5% | 83.2% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 40.0 | 2.92e-01 | 85.8% | 82.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4791706 | 304.126.1.4 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I_N | 0.53 | 34.0 | 3.97e-01 | 97.3% | 97.3% |
| 3783782 | 213.1.1.11 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NAT | 0.53 | 39.0 | 3.33e-01 | 77.9% | 47.4% |
D2
medium
residues 114-204
Domain cluster:
rep: AB605730.1__BAK53019.1__X__00207__D79-181
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rnsA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 31.0 | 3.05e-01 | 74.7% | 45.0% |
| 1r9fA01 | 3.30.390.180 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 | 0.59 | 45.0 | 4.30e-01 | 83.5% | 90.8% |
| 4gl6A01 | 3.10.450.570 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Domain of unknown function (DUF5037), N-terminal subdomain | 0.57 | 32.0 | 3.42e-01 | 86.8% | 61.0% |
| 1h5pA00 | 3.10.390.10 | Alpha Beta › Roll › SAND domain › SAND domain-like | 0.53 | 38.0 | 3.84e-01 | 78.0% | 84.2% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.52 | 36.0 | 2.98e-01 | 71.4% | 85.2% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 32.0 | 3.70e-01 | 78.0% | 93.2% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.52 | 39.0 | 2.66e-01 | 80.2% | 47.0% |
| 5o9iA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.50 | 35.0 | 2.90e-01 | 71.4% | 84.2% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 3.56e-01 | 80.2% | 68.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5059796 | 4326.1.1.0 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like | 0.62 | 44.0 | 4.94e-01 | 80.2% | 100.0% |
| 2439908 | 843.1.1.1 ↗ | a+b two layers › Tombusvirus P19 core protein, VP19 › Tombusvirus P19 core protein, VP19 › Tombusvirus P19 core protein, VP19 › Tombus_P19 | 0.59 | 50.0 | 4.34e-01 | 95.6% | 74.7% |
| 4585224 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.58 | 33.0 | 3.21e-01 | 74.7% | 50.0% |
| 3794544 | 376.1.1.115 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ, zf-Di19 | 0.56 | 39.0 | 3.27e-01 | 73.6% | 53.1% |
| 5013038 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.53 | 36.0 | 3.02e-01 | 70.3% | 83.7% |
| 3377897 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 40.0 | 2.45e-01 | 81.3% | 29.2% |
| None | — | 0.51 | 39.0 | 2.39e-01 | 81.3% | 26.8% | |
| 3284171 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 38.0 | 3.26e-01 | 78.0% | 95.3% |
| 3751321 | 386.1.1.323 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zf-C2H2_ZNF451_2nd | 0.51 | 38.0 | 3.27e-01 | 78.0% | 91.7% |
| 3315984 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 42.0 | 2.61e-01 | 96.7% | 39.4% |
| 3356491 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.50 | 42.0 | 2.97e-01 | 97.8% | 74.2% |