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OM732337.1__UNA02154.1__vBAmaSR9Y3_21__00021

Bact-Vir

OM732337.1__UNA02154.1__vBAmaSR9Y3_21__00021

Identity

Accession:
OM732337 ↗
Kingdom:
phage

Quality

87.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alteromonas_phage_vB_AmaS-R9Y3

TaxID: 2924073

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-102
PDB
Domain cluster: rep: IMGVR_UViG_3300014914_000852-3300014914-Ga0164311_100022737__D57-138
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00877.26 best NLPC_P60 30.4 4.50e-07 87.5% 53.3%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.84 73.0 6.18e-01 95.0% 59.3%
6biqC01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.84 71.0 6.10e-01 90.0% 62.0%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.83 73.0 6.09e-01 97.5% 58.1%
3h41A03 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.80 72.0 6.11e-01 96.2% 61.9%
2evrA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.80 71.0 5.69e-01 95.0% 57.4%
4fdyA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.78 69.0 5.76e-01 97.5% 57.5%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 66.0 5.60e-01 100.0% 72.5%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.68 61.0 5.07e-01 100.0% 65.2%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.68 58.0 5.06e-01 97.5% 95.2%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 57.0 4.91e-01 100.0% 69.5%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 42.0 4.70e-01 70.0% 85.7%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 44.0 4.42e-01 71.2% 81.5%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 40.0 4.80e-01 70.0% 100.0%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 42.0 4.71e-01 73.8% 90.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 41.0 4.57e-01 70.0% 91.5%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 42.0 4.77e-01 71.2% 100.0%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.61 51.0 4.59e-01 95.0% 85.8%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 42.0 3.42e-01 72.5% 70.8%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 51.0 3.47e-01 98.8% 69.8%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 43.0 4.47e-01 77.5% 98.6%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.59 41.0 4.57e-01 73.8% 100.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 4.06e-01 72.5% 76.1%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 42.0 3.95e-01 76.2% 84.4%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.42e-01 95.0% 94.1%
2dlpA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 41.0 4.09e-01 77.5% 82.4%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.56 35.0 4.21e-01 78.8% 98.1%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 41.0 3.96e-01 77.5% 97.8%
2kuqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 43.0 3.46e-01 81.2% 57.5%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 40.0 3.53e-01 75.0% 89.4%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.55 33.0 4.05e-01 77.5% 100.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.55 32.0 4.03e-01 71.2% 100.0%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 3.99e-01 82.5% 95.8%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 37.0 3.45e-01 72.5% 82.7%
6nu8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 40.0 3.43e-01 85.0% 98.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 4.02e-01 90.0% 95.3%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 3.21e-01 87.5% 91.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 4.30e-01 95.0% 94.5%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3975571 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.92 86.0 6.28e-01 98.8% 42.1%
3968700 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.90 84.0 6.77e-01 98.8% 69.3%
3963980 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.88 78.0 6.29e-01 98.8% 52.4%
3947596 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.86 80.0 6.62e-01 100.0% 60.0%
4277582 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.85 72.0 5.94e-01 91.3% 53.3%
3980140 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.85 70.0 5.77e-01 90.0% 51.9%
1489617 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.84 73.0 6.11e-01 96.2% 56.9%
5063005 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.83 71.0 6.10e-01 95.0% 61.0%
3959495 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.83 67.0 6.83e-01 91.3% 87.2%
3286961 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.82 68.0 5.44e-01 95.0% 48.3%
3979648 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.81 76.0 6.09e-01 100.0% 55.6%
2410168 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.81 75.0 6.23e-01 100.0% 59.8%
3517692 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.81 68.0 5.75e-01 93.8% 56.8%
4169712 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.81 70.0 5.89e-01 91.3% 60.0%
161350 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.80 71.0 5.68e-01 95.0% 57.0%
4078132 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.80 72.0 6.05e-01 96.2% 60.9%
3960144 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.80 54.0 5.60e-01 83.7% 74.7%
3278116 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.77 63.0 5.52e-01 91.3% 60.9%
3257922 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.77 65.0 6.08e-01 90.0% 76.8%
3917565 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.76 57.0 4.60e-01 80.0% 65.3%
182479 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.75 70.0 5.00e-01 100.0% 95.2%
3341084 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.74 51.0 4.75e-01 71.2% 100.0%
3282002 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.73 66.0 4.64e-01 97.5% 81.3%
4405252 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.71 62.0 5.20e-01 100.0% 90.7%
5044373 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 48.0 5.47e-01 78.8% 96.7%
3510526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 44.0 5.13e-01 70.0% 100.0%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 44.0 4.35e-01 75.0% 64.7%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.98e-01 72.5% 96.9%
3875218 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.66 42.0 4.66e-01 70.0% 81.5%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 45.0 5.06e-01 76.2% 95.0%
3914746 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.65 43.0 4.53e-01 70.0% 77.1%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 47.0 4.85e-01 77.5% 89.3%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 43.0 4.64e-01 71.2% 84.6%
4015071 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 45.0 4.76e-01 76.2% 84.3%
3506279 4.1.1.112 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_1_RapA 0.63 41.0 4.79e-01 72.5% 98.2%
4935681 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 40.0 4.58e-01 72.5% 96.4%
3261395 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 41.0 4.72e-01 73.8% 94.8%
3660923 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 39.0 4.20e-01 71.2% 74.3%
3651961 4.1.1.251 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.62 41.0 4.80e-01 76.2% 100.0%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 41.0 4.74e-01 76.2% 100.0%
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.14e-01 81.2% 93.9%
4098445 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.62 39.0 4.43e-01 71.2% 86.7%
4200330 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.61 46.0 4.00e-01 81.2% 85.6%
4372288 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.61 38.0 4.32e-01 70.0% 85.0%
3486328 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 40.0 4.49e-01 71.2% 90.0%
4660107 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.61 39.0 4.43e-01 72.5% 88.3%
5036621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 39.0 4.52e-01 71.2% 96.4%
3486327 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 39.0 4.35e-01 71.2% 86.7%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 43.0 4.68e-01 77.5% 96.9%
3651964 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.59 45.0 3.95e-01 81.2% 90.0%
3222917 220.1.1.29 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.59 40.0 3.06e-01 70.0% 38.9%
3366578 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.59 45.0 3.95e-01 81.2% 90.8%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.59 41.0 4.40e-01 76.2% 84.3%
4357819 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.58 39.0 4.19e-01 73.8% 80.0%
3492757 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 40.0 4.23e-01 72.5% 91.4%
5032178 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 49.0 3.49e-01 93.8% 79.6%
3253267 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.61e-01 92.5% 97.6%
3620094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 36.0 4.19e-01 70.0% 94.5%
3389169 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 45.0 4.49e-01 97.5% 85.9%
3358753 4.1.1.381 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.56 43.0 3.43e-01 83.7% 40.0%
4936291 4.1.1.487 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7205 0.55 39.0 4.21e-01 75.0% 92.3%
4648652 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.55 41.0 3.78e-01 78.8% 97.1%
3547084 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 42.0 4.06e-01 96.2% 74.4%
3169607 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.55 40.0 4.16e-01 77.5% 93.3%
4147056 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 43.0 4.06e-01 93.8% 70.0%
4989705 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.54 36.0 3.40e-01 81.2% 53.3%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.53 40.0 4.04e-01 96.2% 83.7%
3391558 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.53 41.0 4.13e-01 91.3% 81.2%
3576128 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 44.0 4.01e-01 97.5% 68.7%
3877485 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.53 42.0 4.12e-01 93.8% 81.2%
3230083 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 43.0 4.18e-01 93.8% 80.0%
3936845 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 41.0 3.43e-01 90.0% 92.3%
4589595 4.1.1.447 ↗ beta barrels › SH3 › SH3 › SH3 › PF28065 0.50 34.0 3.69e-01 72.5% 92.3%