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OM735461.1__UOK17917.1__X__00035

Bact-Vir

OM735461.1__UOK17917.1__X__00035

Identity

Accession:
OM735461 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-118
PDB
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 42.0 4.63e-01 100.0% 67.7%
2kz4A00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.74 67.0 5.94e-01 100.0% 70.5%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.69 55.0 5.57e-01 96.2% 84.8%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.65 58.0 5.06e-01 100.0% 65.8%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.64 59.0 5.56e-01 100.0% 94.7%
2as9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 56.0 5.28e-01 100.0% 79.8%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.64 55.0 5.13e-01 93.8% 76.5%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 57.0 4.44e-01 100.0% 66.9%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.63 57.0 4.38e-01 100.0% 48.9%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.62 56.0 4.57e-01 100.0% 78.2%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 48.0 4.77e-01 96.2% 82.9%
2wzpR01 2.30.300.20 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 0.61 48.0 3.73e-01 100.0% 36.7%
1eq9A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 53.0 4.68e-01 100.0% 90.6%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.58 51.0 5.13e-01 98.8% 94.9%
3eehA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 42.0 3.72e-01 76.2% 99.1%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.58 53.0 4.52e-01 100.0% 67.2%
1twfB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.57 44.0 3.85e-01 83.7% 99.2%
2cc6A00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.57 38.0 4.20e-01 70.0% 92.2%
1g3pA02 3.90.450.1 Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 0.56 40.0 3.75e-01 76.2% 73.1%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 49.0 4.69e-01 96.2% 88.0%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.56 39.0 3.71e-01 72.5% 64.6%
1tolA01 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.56 37.0 3.71e-01 70.0% 65.9%
3ndiA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 43.0 3.24e-01 83.7% 85.1%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 47.0 4.08e-01 100.0% 88.3%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 49.0 4.48e-01 100.0% 82.9%
2w1kA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.55 48.0 3.60e-01 100.0% 59.6%
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 46.0 3.54e-01 95.0% 62.8%
5k9aA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.54 48.0 3.56e-01 100.0% 57.7%
1g3pA01 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.54 36.0 3.51e-01 70.0% 61.4%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.54 37.0 3.27e-01 72.5% 93.8%
3fn5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.54 48.0 3.82e-01 100.0% 76.7%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 4.15e-01 96.2% 80.2%
4xt6A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.53 41.0 2.88e-01 81.2% 93.7%
3b5iB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 42.0 2.97e-01 85.0% 97.1%
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.53 44.0 4.13e-01 100.0% 77.0%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.52 41.0 3.10e-01 87.5% 99.5%
2w59A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.94e-01 95.0% 72.0%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 4.10e-01 93.8% 91.8%
3fn2A00 3.30.2200.10 Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 0.51 41.0 3.85e-01 87.5% 85.6%
1nh2C00 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.51 29.0 3.41e-01 98.8% 88.0%
5heeA00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.51 40.0 2.87e-01 88.7% 98.5%
4rv9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 38.0 2.96e-01 85.0% 87.6%
1ow0A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 40.0 3.74e-01 95.0% 70.0%
3fpfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 41.0 2.81e-01 87.5% 56.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4669352 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.87 73.0 6.52e-01 100.0% 65.5%
3946118 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 72.0 7.47e-01 95.0% 100.0%
4952364 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.78 58.0 5.75e-01 97.5% 74.1%
3949274 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 71.0 6.17e-01 100.0% 69.6%
4879695 1.1.13.29 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 0.75 69.0 5.68e-01 100.0% 59.1%
3590201 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 68.0 6.09e-01 100.0% 74.1%
4032900 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 66.0 6.00e-01 98.8% 78.1%
5056723 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 58.0 5.50e-01 98.8% 71.6%
5026244 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 56.0 5.41e-01 100.0% 73.3%
4608778 1.1.7.107 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.71 62.0 5.38e-01 100.0% 63.3%
3936663 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 64.0 5.45e-01 100.0% 76.8%
185291 1.1.13.20 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.70 56.0 5.66e-01 97.5% 85.0%
4032883 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.69 60.0 5.50e-01 98.8% 73.3%
4260084 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.69 58.0 4.98e-01 100.0% 60.0%
4342567 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.68 59.0 5.15e-01 100.0% 64.3%
3968097 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.68 58.0 5.13e-01 100.0% 66.4%
4954563 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 59.0 5.80e-01 98.8% 88.2%
3602252 325.1.7.7 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › DUF2118 0.67 45.0 4.60e-01 70.0% 91.1%
4883825 1.1.13.20 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.67 60.0 5.76e-01 100.0% 84.8%
2642578 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.67 61.0 5.41e-01 100.0% 71.8%
160389 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.66 59.0 5.04e-01 100.0% 62.6%
3792089 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.66 45.0 3.77e-01 71.2% 96.3%
4031285 1.1.13.64 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal 0.65 60.0 5.81e-01 100.0% 88.9%
3974369 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 59.0 5.81e-01 100.0% 91.8%
3604610 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 49.0 5.36e-01 91.3% 100.0%
4024673 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.64 43.0 3.90e-01 70.0% 100.0%
5070341 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.64 44.0 3.76e-01 71.2% 99.2%
4260208 1.1.13.62 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 0.64 58.0 5.21e-01 97.5% 100.0%
3492373 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.64 44.0 3.88e-01 71.2% 97.4%
3299946 1.1.7.81 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel 0.63 57.0 5.05e-01 100.0% 70.4%
4656128 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.63 57.0 4.29e-01 100.0% 66.8%
3216247 1.1.7.25 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN 0.63 52.0 5.05e-01 100.0% 81.1%
3518863 221.1.2.16 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C 0.62 42.0 3.87e-01 70.0% 100.0%
184486 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.62 51.0 5.08e-01 97.5% 87.7%
4982501 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 53.0 5.04e-01 98.8% 80.0%
5079559 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 55.0 4.86e-01 100.0% 87.0%
4771500 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.60 54.0 5.15e-01 100.0% 87.1%
3941988 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 54.0 4.79e-01 100.0% 87.8%
3542585 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.60 55.0 3.83e-01 100.0% 37.6%
5001586 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 48.0 4.65e-01 100.0% 80.0%
4033714 1.1.13.7 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail 0.59 53.0 5.04e-01 100.0% 89.5%
3249705 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 44.0 4.24e-01 93.8% 71.1%
4313132 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.58 52.0 3.65e-01 100.0% 36.0%
4176978 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.58 52.0 3.69e-01 100.0% 36.7%
3948350 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.58 52.0 4.84e-01 100.0% 95.0%
1320672 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.58 53.0 3.62e-01 100.0% 31.9%
4974179 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.58 39.0 3.60e-01 71.2% 69.1%
3259730 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 52.0 4.66e-01 100.0% 81.8%
4217713 327.21.1.2 a+b two layers › Alpha-lytic protease prodomain-like › SpoIIE regulatory domain › SpoIIE regulatory domain › PF31108 0.56 46.0 4.58e-01 98.8% 84.7%
5016827 5090.1.1.11 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S_layer_N 0.56 38.0 3.38e-01 70.0% 77.3%
4615227 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.56 51.0 3.59e-01 100.0% 36.7%
4458331 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.55 49.0 3.55e-01 100.0% 37.0%
4519471 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.54 46.0 4.59e-01 97.5% 91.7%
3966849 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 41.0 3.64e-01 85.0% 76.8%
2775426 290.1.1.1 beta barrels › Sortase › Sortase › Sortase › Sortase 0.54 48.0 3.61e-01 100.0% 62.6%
4187781 290.1.1.1 beta barrels › Sortase › Sortase › Sortase › Sortase 0.54 48.0 3.55e-01 100.0% 58.1%
3725920 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.54 41.0 3.93e-01 83.7% 74.7%
5071962 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 42.0 3.56e-01 88.7% 75.2%
428579 290.1.1.1 beta barrels › Sortase › Sortase › Sortase › Sortase 0.53 48.0 3.99e-01 100.0% 85.4%
4943369 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.53 45.0 3.27e-01 96.2% 83.0%
3265038 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 46.0 3.09e-01 97.5% 40.0%
4525377 3112.1.1.1 beta barrels › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › Uncharacterized protein Dsy0195 › YabP 0.51 37.0 3.93e-01 96.2% 91.2%