←Back to structures
OM735461.1__UOK17939.1__X__00057
Bact-VirOM735461.1__UOK17939.1__X__00057
Identity
- Accession:
- OM735461 ↗
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 54-112
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 42.0 | 4.26e-01 | 93.2% | 68.3% |
| 1zavA01 | 3.30.70.1730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain | 0.62 | 48.0 | 3.80e-01 | 88.1% | 57.8% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 50.0 | 4.26e-01 | 94.9% | 76.5% |
| 2zttA00 | 6.10.140.720 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 42.0 | 3.87e-01 | 98.3% | 57.5% |
| 3qaoA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.59 | 48.0 | 3.60e-01 | 88.1% | 37.9% |
| 4c2uA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 49.0 | 4.45e-01 | 94.9% | 92.6% |
| 5jqyA02 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.59 | 44.0 | 3.06e-01 | 79.7% | 29.6% |
| 2ypyA00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.58 | 47.0 | 3.69e-01 | 91.5% | 73.1% |
| 3bqkA02 | 1.20.1310.20 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Duffy-antigen binding domain | 0.57 | 50.0 | 3.73e-01 | 98.3% | 50.3% |
| 3it4B01 | 3.30.2330.10 | Alpha Beta › 2-Layer Sandwich › arginine biosynthesis bifunctional protein fold › arginine biosynthesis bifunctional protein suprefamily | 0.57 | 49.0 | 4.44e-01 | 94.9% | 98.7% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 46.0 | 3.71e-01 | 94.9% | 60.5% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 46.0 | 3.73e-01 | 93.2% | 60.2% |
| 2v4iB01 | 3.30.2330.10 | Alpha Beta › 2-Layer Sandwich › arginine biosynthesis bifunctional protein fold › arginine biosynthesis bifunctional protein suprefamily | 0.57 | 49.0 | 4.51e-01 | 96.6% | 100.0% |
| 5j60A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 49.0 | 3.41e-01 | 96.6% | 82.2% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 41.0 | 3.87e-01 | 83.1% | 75.7% |
| 1ocsA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 43.0 | 3.49e-01 | 93.2% | 61.4% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.55 | 44.0 | 4.20e-01 | 93.2% | 98.6% |
| 1dmuA00 | 3.40.600.20 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Restriction endonuclease BglI | 0.54 | 47.0 | 3.04e-01 | 100.0% | 20.4% |
| 3vvmA02 | 1.10.1740.110 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.54 | 44.0 | 3.80e-01 | 96.6% | 58.8% |
| 1w23A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 44.0 | 3.72e-01 | 91.5% | 73.8% |
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 42.0 | 4.04e-01 | 91.5% | 98.6% |
| 1x9mA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 46.0 | 3.15e-01 | 100.0% | 54.9% |
| 1y4oA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 39.0 | 3.32e-01 | 79.7% | 56.7% |
| 2b61A02 | 1.10.1740.110 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.53 | 44.0 | 3.73e-01 | 96.6% | 54.8% |
| 2f76X00 | 1.10.150.490 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Retroviral GAG p10 protein | 0.53 | 40.0 | 3.48e-01 | 86.4% | 91.0% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 3.55e-01 | 88.1% | 75.8% |
| 4l7aA00 | 3.40.390.70 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › | 0.53 | 45.0 | 2.94e-01 | 94.9% | 40.6% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 40.0 | 3.05e-01 | 89.8% | 93.9% |
| 1io0A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.52 | 47.0 | 3.35e-01 | 98.3% | 37.3% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.52 | 42.0 | 3.55e-01 | 100.0% | 53.6% |
| 1hjrA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.30e-01 | 100.0% | 100.0% |
| 1vt0k00 | 1.10.3230.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) | 0.51 | 44.0 | 3.31e-01 | 96.6% | 56.6% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.51 | 37.0 | 3.72e-01 | 84.7% | 91.4% |
| 3ag7A00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.50 | 44.0 | 3.64e-01 | 98.3% | 75.2% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3841771 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.64 | 52.0 | 3.89e-01 | 91.5% | 54.0% |
| 4027433 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.63 | 49.0 | 5.28e-01 | 86.4% | 100.0% |
| 3579763 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.63 | 53.0 | 4.29e-01 | 91.5% | 50.9% |
| 3564807 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.63 | 51.0 | 3.84e-01 | 91.5% | 51.0% |
| 3593806 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 3.79e-01 | 88.1% | 97.1% |
| 4002571 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 50.0 | 4.10e-01 | 93.2% | 65.0% |
| 3785535 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 48.0 | 3.83e-01 | 88.1% | 58.5% |
| 3509864 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 51.0 | 4.00e-01 | 91.5% | 62.4% |
| 3266842 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 52.0 | 4.10e-01 | 94.9% | 62.4% |
| 3251342 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 46.0 | 3.69e-01 | 81.4% | 58.3% |
| 4981250 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.61 | 48.0 | 4.17e-01 | 88.1% | 66.3% |
| 3531702 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 49.0 | 3.77e-01 | 91.5% | 55.0% |
| 4123079 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.60 | 43.0 | 4.50e-01 | 88.1% | 81.8% |
| 3680927 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.59 | 51.0 | 3.24e-01 | 100.0% | 89.0% |
| 3356898 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.59 | 46.0 | 3.51e-01 | 88.1% | 49.3% |
| 3693431 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.58 | 43.0 | 2.69e-01 | 78.0% | 59.7% |
| 3852300 | 219.1.1.79 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 | 0.58 | 48.0 | 3.33e-01 | 94.9% | 26.2% |
| 3311707 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.58 | 47.0 | 3.04e-01 | 100.0% | 41.4% |
| 3926513 | 5069.1.1.38 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Frag1 | 0.58 | 51.0 | 3.40e-01 | 100.0% | 89.2% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 46.0 | 3.61e-01 | 84.7% | 48.7% |
| 4943574 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 51.0 | 3.88e-01 | 100.0% | 93.6% |
| 3596327 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.57 | 42.0 | 4.12e-01 | 78.0% | 81.5% |
| 4027679 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 46.0 | 3.76e-01 | 86.4% | 57.1% |
| 5035493 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.56 | 44.0 | 3.60e-01 | 84.7% | 53.3% |
| 4083451 | 192.2.1.20 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP | 0.56 | 44.0 | 3.98e-01 | 84.7% | 72.5% |
| 3990725 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.56 | 43.0 | 3.97e-01 | 88.1% | 88.7% |
| 3605526 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 47.0 | 3.64e-01 | 96.6% | 43.0% |
| 4031520 | 101.1.9.64 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_23 | 0.55 | 40.0 | 3.94e-01 | 78.0% | 72.3% |
| 4224821 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 47.0 | 3.76e-01 | 93.2% | 83.5% |
| 3808578 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 46.0 | 4.21e-01 | 88.1% | 82.4% |
| 3426662 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 39.0 | 2.74e-01 | 100.0% | 22.7% |
| 4410759 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 46.0 | 3.62e-01 | 89.8% | 80.0% |
| 3643907 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 47.0 | 3.43e-01 | 100.0% | 35.0% |
| 4029803 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 47.0 | 3.58e-01 | 93.2% | 73.1% |
| 4950012 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.55 | 46.0 | 3.50e-01 | 94.9% | 52.1% |
| 3270487 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 47.0 | 3.76e-01 | 93.2% | 86.4% |
| 4997148 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 45.0 | 3.11e-01 | 93.2% | 62.3% |
| 4025655 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 46.0 | 3.88e-01 | 93.2% | 86.3% |
| 3170963 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 47.0 | 3.60e-01 | 100.0% | 44.6% |
| None | — | 0.52 | 44.0 | 2.56e-01 | 100.0% | 22.6% | |
| 3862290 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 46.0 | 3.39e-01 | 100.0% | 37.4% |
| 4025618 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 44.0 | 2.82e-01 | 96.6% | 20.7% |