←Back to structures

OM743306.1__UNA01424.1__MG295_00007__00007

Bact-Vir

OM743306.1__UNA01424.1__MG295_00007__00007

Identity

Accession:
OM743306 ↗
Kingdom:
phage

Quality

75.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bequatrovirus› Bacillus_phage_vB_BcgM

TaxID: 2918264

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-111
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.84 64.0 6.38e-01 100.0% 78.3%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.78 64.0 6.37e-01 100.0% 85.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 57.0 5.47e-01 100.0% 71.2%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.76 55.0 4.62e-01 100.0% 45.1%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 52.0 5.06e-01 100.0% 73.4%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.69 54.0 5.41e-01 100.0% 84.7%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.67 51.0 4.37e-01 100.0% 50.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 55.0 5.30e-01 100.0% 80.0%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.24e-01 98.3% 78.9%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 5.13e-01 100.0% 76.8%
5jcvA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.65 46.0 3.28e-01 74.1% 86.3%
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 47.0 4.13e-01 100.0% 55.2%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 54.0 5.35e-01 100.0% 93.3%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 54.0 4.25e-01 100.0% 60.5%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 53.0 4.54e-01 100.0% 59.2%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.45e-01 100.0% 62.8%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 53.0 4.89e-01 100.0% 84.2%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 53.0 4.76e-01 100.0% 78.3%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 54.0 5.25e-01 100.0% 96.9%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.60 52.0 4.84e-01 100.0% 86.8%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.60 51.0 3.49e-01 94.8% 30.0%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 36.0 3.43e-01 82.8% 49.3%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 4.67e-01 100.0% 73.8%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 5.00e-01 100.0% 85.3%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.80e-01 100.0% 83.1%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 51.0 4.76e-01 100.0% 88.0%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 51.0 5.02e-01 100.0% 96.8%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 51.0 5.00e-01 98.3% 96.8%
1v61A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 50.0 3.91e-01 100.0% 59.8%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 50.0 3.98e-01 96.6% 75.0%
1dpjA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.58 40.0 3.08e-01 75.9% 63.0%
1wkrA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.58 42.0 3.13e-01 81.0% 70.0%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 3.96e-01 100.0% 50.4%
1am5A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.57 42.0 3.16e-01 79.3% 72.4%
1smrA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.57 41.0 3.12e-01 79.3% 72.3%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 49.0 4.08e-01 100.0% 77.8%
2hq7B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 44.0 3.45e-01 100.0% 36.6%
1yg9A03 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.57 41.0 3.36e-01 79.3% 94.0%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.67e-01 94.8% 100.0%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 49.0 4.19e-01 100.0% 76.3%
7tbdB02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.55 40.0 3.03e-01 81.0% 65.0%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 3.68e-01 82.8% 60.2%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.99e-01 81.0% 100.0%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 44.0 3.66e-01 96.6% 57.9%
6o1wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 2.61e-01 82.8% 91.4%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.52 42.0 2.91e-01 93.1% 59.0%
4cgyA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.51 42.0 3.43e-01 100.0% 90.6%
2gzaA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 39.0 3.28e-01 87.9% 88.9%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1482194 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.84 64.0 6.38e-01 100.0% 78.3%
4656461 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.81 62.0 6.14e-01 100.0% 78.3%
4662294 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 61.0 6.23e-01 100.0% 85.5%
4478186 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 58.0 6.41e-01 98.3% 100.0%
4584943 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.79 65.0 6.07e-01 100.0% 72.9%
4945344 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 60.0 3.72e-01 100.0% 15.1%
4505797 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 64.0 6.12e-01 100.0% 78.5%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 60.0 6.02e-01 100.0% 83.3%
3991244 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.76 55.0 6.08e-01 98.3% 97.8%
5036621 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 56.0 5.70e-01 100.0% 83.6%
139950 4.1.1.126 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5608 0.76 55.0 5.64e-01 100.0% 82.1%
3387119 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.76 60.0 5.17e-01 100.0% 55.6%
4124780 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 61.0 5.63e-01 100.0% 69.9%
4975764 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.75 56.0 5.31e-01 100.0% 67.1%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.75 52.0 5.14e-01 100.0% 70.0%
4332042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 56.0 5.27e-01 100.0% 67.1%
4261362 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 60.0 5.63e-01 100.0% 72.9%
3286662 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.74 64.0 5.21e-01 100.0% 54.0%
4185009 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 60.0 5.76e-01 100.0% 78.5%
4104821 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 60.0 5.47e-01 100.0% 68.0%
3590784 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.73 55.0 5.34e-01 100.0% 72.3%
4010681 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.73 59.0 4.99e-01 100.0% 53.7%
4668201 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.73 52.0 5.55e-01 96.6% 88.0%
5063433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 53.0 5.61e-01 100.0% 92.0%
4974211 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.72 56.0 5.56e-01 100.0% 81.7%
3281271 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.72 63.0 5.37e-01 100.0% 61.1%
4302032 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 56.0 5.49e-01 100.0% 78.5%
4954284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 51.0 5.05e-01 100.0% 73.3%
5033892 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 59.0 5.75e-01 100.0% 83.1%
3502388 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 54.0 4.94e-01 100.0% 65.3%
3588755 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.57e-01 100.0% 83.8%
3407841 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.28e-01 94.8% 86.7%
3585452 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.68 57.0 5.44e-01 98.3% 94.3%
4627519 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 44.0 5.06e-01 91.4% 100.0%
4959077 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.63e-01 98.3% 98.4%
3519861 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.35e-01 100.0% 86.7%
4953675 230.1.1.3 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.66 53.0 3.83e-01 89.7% 62.9%
3784968 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 56.0 5.08e-01 100.0% 86.3%
5063688 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.64 56.0 4.89e-01 100.0% 71.9%
4947702 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 56.0 5.17e-01 100.0% 88.0%
5027286 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 56.0 4.96e-01 100.0% 76.5%
3226615 4.1.1.389 ↗ beta barrels › SH3 › SH3 › SH3 › PF30352 0.63 53.0 4.56e-01 100.0% 57.9%
3188711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.82e-01 100.0% 65.9%
4982975 230.1.1.3 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.63 47.0 3.63e-01 84.5% 95.9%
3386779 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 55.0 5.12e-01 100.0% 87.8%
3581968 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 56.0 4.17e-01 100.0% 43.1%
3487686 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 4.81e-01 100.0% 67.1%
3911035 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.62 52.0 3.80e-01 100.0% 34.8%
5054597 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 54.0 4.97e-01 100.0% 84.0%
4995694 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.80e-01 98.3% 90.9%
4033110 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 53.0 4.91e-01 100.0% 88.0%
3522718 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 53.0 5.30e-01 96.6% 96.7%
4937731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.72e-01 98.3% 85.0%
3590315 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 53.0 4.89e-01 100.0% 84.0%
3910605 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 52.0 4.70e-01 98.3% 80.0%
4952478 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.60 52.0 4.82e-01 100.0% 85.3%
3539015 4357.1.1.5 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE_4 0.60 48.0 3.83e-01 89.7% 51.6%
3914833 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 52.0 4.94e-01 98.3% 81.4%
3214149 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 50.0 4.82e-01 93.1% 83.1%
3593768 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 53.0 4.49e-01 100.0% 62.1%
3773481 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 53.0 4.76e-01 100.0% 76.2%
3829807 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.59 52.0 4.00e-01 100.0% 46.7%
3278425 1.1.5.15 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.58 49.0 3.74e-01 94.8% 72.3%
3336343 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.58 39.0 3.39e-01 70.7% 89.5%
3408507 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.58 43.0 2.71e-01 84.5% 71.6%
3267531 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.57 48.0 3.94e-01 100.0% 50.9%
3522295 1.1.1.2 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp,A1_Propeptide 0.56 41.0 2.60e-01 86.2% 35.9%
3709279 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.14e-01 100.0% 63.3%
4023661 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.55 41.0 2.55e-01 82.8% 67.4%
4221193 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.55 42.0 2.68e-01 84.5% 87.7%
4198659 1.1.1.2 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp,A1_Propeptide 0.55 42.0 2.64e-01 86.2% 77.3%
4670281 1.1.1.27 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.55 42.0 2.67e-01 86.2% 82.6%
3315166 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.54 47.0 4.13e-01 100.0% 92.2%
3471292 1.1.1.38 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, A1_Propeptide, TAXi_C 0.54 41.0 2.59e-01 86.2% 37.8%
5022626 4203.1.1.0 ↗ few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like 0.54 41.0 4.12e-01 87.9% 96.7%
3298161 4286.1.1.1 ↗ beta complex topology › At5g01610-like › At5g01610-like › At5g01610-like › DUF538 0.53 41.0 3.35e-01 89.7% 85.8%
2429554 1.1.1.27 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.52 38.0 2.51e-01 86.2% 87.9%
4931814 1.1.5.15 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.51 42.0 3.30e-01 96.6% 70.0%
3194676 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.51 41.0 3.72e-01 98.3% 95.6%
3368190 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 43.0 2.72e-01 100.0% 88.2%