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OM743306.1__UNA01575.1__MG295_00158__00158
Bact-VirOM743306.1__UNA01575.1__MG295_00158__00158
Identity
- Accession:
- OM743306 ↗
- Kingdom:
- phage
Quality
59.7
mean pLDDT
Taxonomy
TaxID: 2918264
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-13_62-108
D2
medium
residues 18-58
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.83 | 72.0 | 5.90e-01 | 100.0% | 98.7% |
| 3d4rE01 | 2.40.128.400 | Mainly Beta › Beta Barrel › Lipocalin › | 0.73 | 48.0 | 3.81e-01 | 100.0% | 33.3% |
| 4ch7A02 | 3.30.70.3460 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 57.0 | 3.81e-01 | 100.0% | 40.3% |
| 5ejrA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.70 | 58.0 | 4.70e-01 | 100.0% | 48.8% |
| 1h3dA03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 56.0 | 4.99e-01 | 100.0% | 92.5% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 56.0 | 3.76e-01 | 100.0% | 47.9% |
| 5adxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 49.0 | 3.27e-01 | 85.4% | 77.2% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 51.0 | 3.97e-01 | 97.6% | 92.0% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.62 | 52.0 | 4.58e-01 | 100.0% | 69.7% |
| 7kmfJ01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.61 | 48.0 | 3.40e-01 | 100.0% | 26.6% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 52.0 | 4.00e-01 | 100.0% | 54.6% |
| 3gidB02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.61 | 49.0 | 4.08e-01 | 100.0% | 50.6% |
| 1rp5A03 | 3.30.70.2110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 48.0 | 3.76e-01 | 90.2% | 97.8% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.60 | 48.0 | 4.02e-01 | 100.0% | 65.9% |
| 1fviA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.60 | 45.0 | 3.97e-01 | 100.0% | 51.9% |
| 7ok5A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 3.94e-01 | 100.0% | 50.0% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.58 | 43.0 | 4.28e-01 | 100.0% | 92.0% |
| 2r7kA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 44.0 | 4.13e-01 | 100.0% | 75.4% |
| 2dt8A01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 46.0 | 3.19e-01 | 100.0% | 25.5% |
| 3fdjA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.58 | 46.0 | 4.76e-01 | 100.0% | 100.0% |
| 2kyzA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 46.0 | 4.13e-01 | 100.0% | 98.5% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 44.0 | 3.84e-01 | 100.0% | 51.9% |
| 4msxA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 46.0 | 3.76e-01 | 100.0% | 82.8% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 42.0 | 3.47e-01 | 100.0% | 42.1% |
| 2j8bA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 42.0 | 3.71e-01 | 100.0% | 85.9% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.55 | 45.0 | 3.18e-01 | 95.1% | 39.9% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 2.90e-01 | 82.9% | 28.9% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 40.0 | 2.50e-01 | 80.5% | 30.2% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.52 | 40.0 | 3.94e-01 | 100.0% | 100.0% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 39.0 | 2.83e-01 | 100.0% | 25.5% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1318644 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.72 | 58.0 | 4.84e-01 | 100.0% | 87.8% |
| 5057051 | 304.130.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain | 0.71 | 59.0 | 4.96e-01 | 100.0% | 94.7% |
| 3388528 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.69 | 54.0 | 5.50e-01 | 100.0% | 95.0% |
| 4190103 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.69 | 52.0 | 5.32e-01 | 95.1% | 94.7% |
| 4099915 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.68 | 50.0 | 5.22e-01 | 90.2% | 97.1% |
| 4666101 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 51.0 | 5.03e-01 | 100.0% | 80.0% |
| 3622513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 55.0 | 4.96e-01 | 100.0% | 95.0% |
| 3211869 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.66 | 53.0 | 4.34e-01 | 100.0% | 45.6% |
| 5040784 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.65 | 54.0 | 5.15e-01 | 100.0% | 100.0% |
| 3698362 | 11.1.1.1046 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28431 | 0.64 | 54.0 | 3.83e-01 | 100.0% | 41.5% |
| 4998768 | 299.1.1.1 ↗ | a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit | 0.64 | 53.0 | 3.73e-01 | 100.0% | 28.3% |
| 4946939 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.63 | 49.0 | 3.30e-01 | 95.1% | 60.0% |
| 3886126 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 49.0 | 3.68e-01 | 100.0% | 36.7% |
| 4080972 | 308.2.1.0 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain | 0.61 | 41.0 | 3.64e-01 | 75.6% | 54.3% |
| 3397821 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 45.0 | 2.93e-01 | 80.5% | 28.9% |
| 3282305 | 4187.1.1.0 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like | 0.60 | 48.0 | 4.22e-01 | 100.0% | 68.6% |
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.59 | 50.0 | 4.62e-01 | 100.0% | 74.5% |
| 3281849 | 303.1.1.3 ↗ | a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › DUF4189 | 0.59 | 46.0 | 3.56e-01 | 100.0% | 57.5% |
| 3998356 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 50.0 | 4.93e-01 | 100.0% | 97.8% |
| 4993851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 45.0 | 4.43e-01 | 100.0% | 91.1% |
| 3238197 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.56 | 45.0 | 3.11e-01 | 100.0% | 32.2% |
| 3575366 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.56 | 40.0 | 3.46e-01 | 100.0% | 43.2% |
| 4946413 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.55 | 47.0 | 3.23e-01 | 100.0% | 26.5% |
| 3614660 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.55 | 41.0 | 2.51e-01 | 80.5% | 21.5% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.55 | 42.0 | 4.20e-01 | 100.0% | 100.0% |
| 3747259 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.55 | 42.0 | 3.91e-01 | 97.6% | 71.7% |
| 3991455 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.55 | 41.0 | 3.89e-01 | 100.0% | 69.1% |
| 3936136 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 45.0 | 3.09e-01 | 100.0% | 24.8% |
| 3968122 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.54 | 44.0 | 4.35e-01 | 97.6% | 93.3% |
| 3628286 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.54 | 38.0 | 2.85e-01 | 78.0% | 26.9% |
| 4943977 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 43.0 | 4.34e-01 | 97.6% | 100.0% |
| 3743053 | 3628.1.1.1 ↗ | a+b complex topology › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › zf-TFIIIC | 0.53 | 40.0 | 2.77e-01 | 95.1% | 23.3% |
| 3499017 | 822.2.1.0 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like | 0.53 | 37.0 | 3.37e-01 | 87.8% | 50.0% |
| 3164772 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 39.0 | 3.33e-01 | 82.9% | 85.7% |
| 2570789 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.52 | 38.0 | 3.76e-01 | 97.6% | 79.6% |
| 5073271 | 205.1.1.33 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 | 0.52 | 38.0 | 2.70e-01 | 90.2% | 47.1% |
| 2105211 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.52 | 39.0 | 3.45e-01 | 95.1% | 73.3% |
| 5046078 | 11.1.1.246 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 | 0.51 | 39.0 | 3.20e-01 | 100.0% | 46.0% |
| 3598347 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 40.0 | 3.94e-01 | 100.0% | 91.1% |
| 4967778 | 329.1.1.2 ↗ | a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › DUF4443 | 0.51 | 43.0 | 3.20e-01 | 100.0% | 75.5% |
| 3475783 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.50 | 36.0 | 3.77e-01 | 82.9% | 100.0% |