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OM799543.1__UMW87792.1__OY1_11__00011
Bact-VirOM799543.1__UMW87792.1__OY1_11__00011
Identity
- Accession:
- OM799543 ↗
- Kingdom:
- phage
Quality
90.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Maculvirus›
Vibrio_phage_OY1
TaxID: 2923285
Cluster
View cluster (32 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 218-258_370-511
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00476.27 best | DNA_pol_A | 34.7 | 1.40e-08 | 57.9% | 11.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6vddA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.76 | 46.0 | 5.79e-01 | 76.5% | 96.5% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 26.0 | 3.37e-01 | 76.0% | 60.9% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 29.0 | 3.78e-01 | 75.4% | 92.0% |
| 2kq9A00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.50 | 29.0 | 3.64e-01 | 95.6% | 92.9% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1391185 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.81 | 64.0 | 6.47e-01 | 100.0% | 80.5% |
| 4622747 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.80 | 59.0 | 4.65e-01 | 100.0% | 39.7% |
| 1503978 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.77 | 66.0 | 6.46e-01 | 100.0% | 83.6% |
| 3701791 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.76 | 72.0 | 7.03e-01 | 98.4% | 97.9% |
| 3555725 | 2484.1.1.82 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_P_Exo | 0.74 | 65.0 | 4.81e-01 | 97.8% | 40.0% |
| 3705119 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.74 | 70.0 | 6.74e-01 | 100.0% | 99.0% |
| 4995739 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.73 | 63.0 | 6.68e-01 | 97.8% | 99.4% |
| 3595357 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.73 | 68.0 | 6.90e-01 | 97.8% | 98.3% |
| 4975019 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.73 | 56.0 | 6.26e-01 | 98.4% | 99.3% |
| 3333792 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.72 | 65.0 | 6.71e-01 | 100.0% | 97.7% |
| 3676005 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.72 | 65.0 | 4.90e-01 | 99.5% | 43.3% |
| 3598489 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.71 | 56.0 | 6.12e-01 | 98.4% | 97.4% |
| 3272949 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.69 | 64.0 | 6.13e-01 | 96.7% | 89.8% |
| 4464616 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.69 | 26.0 | 3.81e-01 | 95.6% | 73.3% |
| 3714076 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.69 | 63.0 | 6.45e-01 | 95.6% | 100.0% |
| 3277346 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.68 | 60.0 | 6.16e-01 | 98.9% | 96.0% |
| 4024559 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.68 | 55.0 | 5.66e-01 | 97.8% | 86.0% |
| 3716733 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.67 | 62.0 | 4.74e-01 | 96.2% | 100.0% |
| 3704426 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.58 | 52.0 | 3.87e-01 | 100.0% | 39.5% |
| 3743598 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.58 | 38.0 | 4.48e-01 | 100.0% | 96.0% |
| 3197864 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 29.0 | 3.99e-01 | 76.0% | 99.0% |
| 4436275 | 632.1.1.32 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › TMEM208_SND2 | 0.53 | 28.0 | 3.52e-01 | 94.0% | 80.9% |
| 3758701 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 28.0 | 3.90e-01 | 86.9% | 100.0% |
| 4948675 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.52 | 37.0 | 4.23e-01 | 99.5% | 95.0% |
D2
medium
residues 1-214
Domain cluster:
rep: EU717894.1__ACE75786.1__X__00046__D3-184
D3
medium
residues 285-351
D4
medium
residues 512-549_698-808
Domain cluster:
rep: BK013347.1__DAD54719.1__X__00037__D1330-1366_1438-1564
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bgxT05 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.92 | 51.0 | 5.66e-01 | 98.0% | 68.0% |
| 2diuA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.77 | 39.0 | 5.49e-01 | 91.3% | 100.0% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.76 | 40.0 | 5.27e-01 | 77.9% | 92.8% |
| 4lowA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.75 | 38.0 | 5.01e-01 | 89.3% | 86.9% |
| 1yz7A02 | 3.30.70.1130 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha | 0.75 | 46.0 | 5.72e-01 | 98.7% | 100.0% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.75 | 49.0 | 5.64e-01 | 96.6% | 89.3% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.74 | 35.0 | 5.04e-01 | 92.6% | 100.0% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.74 | 43.0 | 5.56e-01 | 93.3% | 98.9% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.74 | 42.0 | 5.39e-01 | 94.0% | 98.8% |
| 1x9mA03 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 64.0 | 5.93e-01 | 98.0% | 74.7% |
| 1bqnA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.73 | 42.0 | 5.17e-01 | 94.6% | 89.4% |
| 7agpA01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.73 | 32.0 | 4.81e-01 | 94.0% | 100.0% |
| 7ahbB01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.72 | 31.0 | 4.72e-01 | 89.9% | 100.0% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.72 | 39.0 | 5.17e-01 | 95.3% | 100.0% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.71 | 37.0 | 5.00e-01 | 95.3% | 100.0% |
| 4aimA03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.71 | 35.0 | 4.83e-01 | 87.9% | 97.2% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.71 | 39.0 | 5.02e-01 | 93.3% | 94.1% |
| 3gr5A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.71 | 34.0 | 4.85e-01 | 77.2% | 100.0% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 37.0 | 5.01e-01 | 98.0% | 100.0% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 36.0 | 4.88e-01 | 98.7% | 98.6% |
| 5wm1A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.70 | 48.0 | 5.58e-01 | 100.0% | 96.3% |
| 6zxbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.69 | 57.0 | 5.79e-01 | 100.0% | 88.9% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 33.0 | 4.60e-01 | 89.9% | 100.0% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 35.0 | 4.72e-01 | 91.3% | 100.0% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.67 | 37.0 | 4.80e-01 | 92.6% | 97.6% |
| 3mtkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.66 | 55.0 | 5.33e-01 | 100.0% | 79.1% |
| 5llwA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.66 | 55.0 | 5.78e-01 | 100.0% | 94.9% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.66 | 33.0 | 4.33e-01 | 93.3% | 88.5% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.66 | 36.0 | 4.51e-01 | 78.5% | 87.6% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.66 | 33.0 | 4.41e-01 | 94.0% | 92.2% |
| 7e6gA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.66 | 58.0 | 5.80e-01 | 100.0% | 92.6% |
| 4kgmA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.66 | 52.0 | 4.47e-01 | 96.0% | 53.9% |
| 2yqrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.65 | 43.0 | 5.15e-01 | 82.6% | 97.1% |
| 1vw4F02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.65 | 37.0 | 4.72e-01 | 96.6% | 93.5% |
| 2kdoA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 32.0 | 4.08e-01 | 94.0% | 86.3% |
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.63 | 60.0 | 5.38e-01 | 100.0% | 95.4% |
| 1gpjA01 | 3.30.460.30 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain | 0.63 | 37.0 | 3.80e-01 | 96.6% | 58.6% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 34.0 | 4.34e-01 | 87.9% | 89.8% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.62 | 59.0 | 5.28e-01 | 100.0% | 91.9% |
| 3ezuA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.62 | 52.0 | 5.24e-01 | 100.0% | 88.5% |
| 1azsA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.62 | 58.0 | 5.31e-01 | 100.0% | 94.2% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.61 | 38.0 | 4.71e-01 | 93.3% | 98.9% |
| 5oyhD00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.61 | 58.0 | 5.32e-01 | 100.0% | 94.6% |
| 1f3vA00 | 3.30.70.680 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TRADD, N-terminal domain | 0.61 | 47.0 | 4.64e-01 | 100.0% | 77.2% |
| 1fx2A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.60 | 56.0 | 4.78e-01 | 100.0% | 89.4% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.60 | 40.0 | 4.33e-01 | 94.0% | 82.6% |
| 1itpA00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.59 | 32.0 | 4.08e-01 | 96.6% | 96.1% |
| 2iruA02 | 3.30.70.3300 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 42.0 | 4.33e-01 | 94.6% | 77.5% |
| 1q2lA03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.59 | 55.0 | 4.69e-01 | 100.0% | 70.0% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.59 | 54.0 | 4.69e-01 | 100.0% | 78.4% |
| 6hciB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 33.0 | 3.90e-01 | 92.6% | 80.8% |
| 4wp3C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.58 | 55.0 | 5.03e-01 | 100.0% | 87.2% |
| 1y10B02 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.58 | 55.0 | 5.07e-01 | 100.0% | 88.5% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.57 | 39.0 | 4.44e-01 | 96.6% | 95.3% |
| 7y8uF01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 53.0 | 4.89e-01 | 99.3% | 80.9% |
| 1q2lA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 52.0 | 4.48e-01 | 99.3% | 87.0% |
| 2g47A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 51.0 | 4.46e-01 | 99.3% | 88.7% |
| 2ijrA01 | 3.30.70.1270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains | 0.56 | 35.0 | 4.13e-01 | 99.3% | 92.8% |
| 8b6jb01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 51.0 | 4.60e-01 | 99.3% | 88.8% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.56 | 52.0 | 5.00e-01 | 100.0% | 93.6% |
| 3b8mC01 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.56 | 48.0 | 4.83e-01 | 91.9% | 100.0% |
| 4jfhE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 4.04e-01 | 99.3% | 84.3% |
| 2r7rA04 | 3.30.70.2480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 4.39e-01 | 96.6% | 79.6% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.55 | 33.0 | 3.91e-01 | 95.3% | 91.5% |
| 6ofsA03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 49.0 | 4.31e-01 | 100.0% | 86.5% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3613455 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.96 | 80.0 | 8.32e-01 | 98.7% | 90.6% |
| 3608339 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.95 | 80.0 | 8.45e-01 | 100.0% | 94.8% |
| 3591785 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.95 | 80.0 | 8.04e-01 | 100.0% | 86.0% |
| 4115602 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.94 | 73.0 | 8.21e-01 | 96.6% | 99.2% |
| 3706910 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.93 | 90.0 | 7.93e-01 | 100.0% | 94.0% |
| 3496338 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.92 | 64.0 | 7.60e-01 | 98.0% | 99.0% |
| 4379259 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.92 | 66.0 | 7.77e-01 | 96.0% | 100.0% |
| 3962170 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.91 | 66.0 | 7.74e-01 | 98.7% | 100.0% |
| 3423771 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.90 | 73.0 | 7.96e-01 | 98.0% | 98.4% |
| 3407163 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.90 | 70.0 | 7.85e-01 | 99.3% | 99.2% |
| 3598488 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.85 | 82.0 | 7.99e-01 | 98.7% | 98.1% |
| 4995741 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.85 | 74.0 | 7.55e-01 | 100.0% | 93.1% |
| 3486431 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.82 | 78.0 | 5.95e-01 | 100.0% | 95.6% |
| 3783788 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.82 | 77.0 | 5.94e-01 | 100.0% | 94.8% |
| 3386797 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.81 | 76.0 | 6.42e-01 | 97.3% | 100.0% |
| 3742418 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.79 | 43.0 | 5.66e-01 | 95.3% | 95.3% |
| 3485236 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.78 | 69.0 | 7.11e-01 | 97.3% | 97.1% |
| 1036625 | 3122.1.1.1 ↗ | a+b complex topology › MESD › MESD › MESD › Mesd | 0.77 | 41.0 | 5.50e-01 | 93.3% | 98.7% |
| 5043879 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.76 | 45.0 | 5.74e-01 | 97.3% | 98.9% |
| 3638055 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.76 | 72.0 | 6.46e-01 | 100.0% | 91.3% |
| 162024 | 304.9.1.19 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › MARF1_RRM1 | 0.75 | 41.0 | 4.97e-01 | 95.3% | 81.2% |
| 5010022 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.75 | 43.0 | 5.62e-01 | 85.9% | 100.0% |
| 3997731 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.74 | 40.0 | 5.28e-01 | 95.3% | 97.5% |
| 5022444 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.74 | 37.0 | 4.87e-01 | 92.6% | 88.7% |
| 5027042 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.73 | 43.0 | 5.48e-01 | 97.3% | 100.0% |
| 4591904 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.71 | 38.0 | 3.26e-01 | 100.0% | 33.2% |
| 4234725 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.71 | 43.0 | 5.21e-01 | 94.6% | 93.7% |
| 3959605 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.71 | 56.0 | 6.12e-01 | 97.3% | 98.4% |
| 5016606 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 35.0 | 3.68e-01 | 77.9% | 50.7% |
| 4978126 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.70 | 37.0 | 5.01e-01 | 73.2% | 100.0% |
| 3408002 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.68 | 41.0 | 4.73e-01 | 94.6% | 80.9% |
| 5040616 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.65 | 41.0 | 4.91e-01 | 95.3% | 94.0% |
| None | — | 0.65 | 62.0 | 4.19e-01 | 100.0% | 40.4% | |
| None | — | 0.64 | 61.0 | 4.10e-01 | 100.0% | 37.8% | |
| 4952701 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.64 | 52.0 | 3.87e-01 | 100.0% | 36.8% |
| 3413344 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.64 | 61.0 | 5.06e-01 | 100.0% | 75.8% |
| None | — | 0.64 | 60.0 | 5.44e-01 | 100.0% | 96.4% | |
| 4663932 | 304.48.1.14 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF | 0.64 | 58.0 | 5.57e-01 | 100.0% | 85.3% |
| 3484276 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.64 | 60.0 | 4.86e-01 | 100.0% | 73.2% |
| 3950698 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.63 | 59.0 | 5.13e-01 | 100.0% | 81.4% |
| 3231858 | 304.8.1.72 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP | 0.63 | 42.0 | 4.94e-01 | 100.0% | 100.0% |
| 2120642 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.63 | 54.0 | 5.59e-01 | 100.0% | 98.6% |
| 3469955 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.62 | 59.0 | 4.77e-01 | 100.0% | 72.5% |
| 3797401 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.62 | 59.0 | 3.85e-01 | 100.0% | 31.5% |
| 3703418 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.62 | 50.0 | 5.20e-01 | 96.6% | 90.0% |
| 3454319 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 32.0 | 3.41e-01 | 76.5% | 52.2% |
| None | — | 0.62 | 59.0 | 3.85e-01 | 100.0% | 31.6% | |
| 3792260 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.62 | 59.0 | 3.90e-01 | 100.0% | 34.3% |
| 3925118 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.62 | 58.0 | 3.80e-01 | 100.0% | 30.3% |
| 3600743 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.62 | 57.0 | 4.91e-01 | 99.3% | 96.0% |
| 2319542 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.62 | 58.0 | 4.96e-01 | 100.0% | 79.3% |
| 3963093 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.62 | 58.0 | 4.26e-01 | 100.0% | 50.0% |
| 3934934 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.61 | 58.0 | 4.80e-01 | 100.0% | 73.9% |
| 4311175 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.61 | 57.0 | 4.62e-01 | 100.0% | 67.4% |
| 4000490 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.61 | 57.0 | 4.66e-01 | 100.0% | 68.1% |
| 3490375 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.61 | 57.0 | 4.77e-01 | 100.0% | 74.6% |
| 3614153 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.61 | 56.0 | 4.69e-01 | 100.0% | 73.6% |
| 3711672 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.61 | 56.0 | 4.87e-01 | 100.0% | 81.8% |
| 4115819 | 304.48.1.48 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 | 0.61 | 51.0 | 4.87e-01 | 100.0% | 78.2% |
| 3395101 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.60 | 56.0 | 4.75e-01 | 100.0% | 88.7% |
| 4652155 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.60 | 56.0 | 4.89e-01 | 100.0% | 82.7% |
| 4611955 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.60 | 56.0 | 4.99e-01 | 99.3% | 86.3% |
| 3511287 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.60 | 57.0 | 4.83e-01 | 100.0% | 76.1% |
| 5033652 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.60 | 56.0 | 4.81e-01 | 100.0% | 81.3% |
| 4065577 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.60 | 56.0 | 4.76e-01 | 100.0% | 78.3% |
| 3489670 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.60 | 55.0 | 4.75e-01 | 100.0% | 77.4% |
| 3931914 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.59 | 55.0 | 4.64e-01 | 100.0% | 87.5% |
| 3235469 | 309.1.1.8 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M | 0.59 | 55.0 | 4.62e-01 | 100.0% | 72.7% |
| None | — | 0.59 | 55.0 | 4.63e-01 | 100.0% | 72.7% | |
| 4170997 | 304.48.1.39 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › MatK_N | 0.59 | 53.0 | 4.76e-01 | 96.6% | 76.1% |
| 3413235 | 309.1.1.6 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C,Peptidase_M16_M | 0.59 | 55.0 | 4.65e-01 | 100.0% | 75.3% |
| 3932576 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.58 | 53.0 | 3.61e-01 | 100.0% | 33.1% |
| 3705667 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.58 | 53.0 | 4.70e-01 | 100.0% | 84.7% |
| 4649093 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.58 | 54.0 | 4.95e-01 | 100.0% | 97.4% |
| 3996738 | 309.1.1.6 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C,Peptidase_M16_M | 0.57 | 52.0 | 4.30e-01 | 99.3% | 78.1% |
| 3593319 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.57 | 50.0 | 4.62e-01 | 99.3% | 75.7% |
| 3998581 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.56 | 52.0 | 3.76e-01 | 100.0% | 38.0% |
| 5051427 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.56 | 47.0 | 4.10e-01 | 91.3% | 89.1% |
| 3247408 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.56 | 51.0 | 3.60e-01 | 100.0% | 36.3% |
| 2322641 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.56 | 26.0 | 3.28e-01 | 94.6% | 72.6% |
| 3958612 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.55 | 51.0 | 4.52e-01 | 100.0% | 84.3% |
| 5081693 | 304.160.1.1 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › GvpL_GvpF | 0.55 | 46.0 | 4.75e-01 | 95.3% | 95.7% |
| 5579 | 306.8.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › TM1457-like › TM1457-like › Peptidase_Prp | 0.55 | 33.0 | 3.91e-01 | 95.3% | 91.5% |
| 3938777 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.55 | 50.0 | 3.46e-01 | 99.3% | 31.8% |
| 5032498 | 304.160.1.1 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › GvpL_GvpF | 0.54 | 45.0 | 4.65e-01 | 94.6% | 94.3% |
| 3168619 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.54 | 40.0 | 4.23e-01 | 93.3% | 85.2% |
| 3795160 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.53 | 48.0 | 4.18e-01 | 98.7% | 67.7% |
| 4003644 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 42.0 | 4.03e-01 | 100.0% | 73.1% |
D5
medium
residues 550-697
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xviA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.78 | 53.0 | 5.42e-01 | 100.0% | 71.5% |
| 4x0qA04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.68 | 46.0 | 4.73e-01 | 91.2% | 70.8% |
| 1aroP05 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 49.0 | 4.36e-01 | 89.9% | 87.1% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 24.0 | 2.78e-01 | 73.0% | 53.9% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024558 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.85 | 55.0 | 5.66e-01 | 90.5% | 68.6% |
| 3704770 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.85 | 63.0 | 6.76e-01 | 90.5% | 86.9% |
| 4169333 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.84 | 57.0 | 6.21e-01 | 91.9% | 81.6% |
| 3601930 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.83 | 77.0 | 7.04e-01 | 100.0% | 77.3% |
| 4456463 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.83 | 56.0 | 5.93e-01 | 91.2% | 77.7% |
| 3969341 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.82 | 56.0 | 6.09e-01 | 91.2% | 81.6% |
| 3386797 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.81 | 53.0 | 4.50e-01 | 91.2% | 43.3% |
| 3711347 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.81 | 54.0 | 5.62e-01 | 91.9% | 72.1% |
| 3595356 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.81 | 54.0 | 5.83e-01 | 91.2% | 80.0% |
| 4876668 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.80 | 54.0 | 5.90e-01 | 91.2% | 82.3% |
| 3259994 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.80 | 53.0 | 5.67e-01 | 89.9% | 76.9% |
| 4217329 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.79 | 53.0 | 5.85e-01 | 100.0% | 83.3% |
| 3562851 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.79 | 54.0 | 5.47e-01 | 100.0% | 71.0% |
| 3277186 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.78 | 54.0 | 5.83e-01 | 91.2% | 83.2% |
| 3423772 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.78 | 53.0 | 5.98e-01 | 91.2% | 89.6% |
| 3483301 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.77 | 53.0 | 5.29e-01 | 91.9% | 68.7% |
| 3707219 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.76 | 56.0 | 6.18e-01 | 77.7% | 93.3% |
| 2579554 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.75 | 51.0 | 5.17e-01 | 91.2% | 68.9% |
| 3703169 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.74 | 65.0 | 6.31e-01 | 90.5% | 86.9% |
| 4848450 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.71 | 48.0 | 4.97e-01 | 91.9% | 73.4% |
| 2970332 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.71 | 48.0 | 4.91e-01 | 91.2% | 71.3% |
| 3793393 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 36.0 | 4.73e-01 | 88.5% | 91.3% |
| 3654151 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.68 | 56.0 | 5.39e-01 | 91.2% | 77.6% |
| 5053842 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 31.0 | 3.53e-01 | 91.9% | 68.2% |