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OM810292.1__UOX39524.1__X__00079
Bact-VirOM810292.1__UOX39524.1__X__00079
Identity
- Accession:
- OM810292 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Taxonomy
TaxID: 2924888
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-86
Domain cluster:
rep: ON287375.1__UQT03322.1__YUBABA_01160__00116__D7-77
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hczA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.71 | 38.0 | 4.16e-01 | 94.4% | 62.7% |
| 6krwA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.64 | 46.0 | 3.02e-01 | 76.4% | 44.1% |
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.61 | 37.0 | 4.43e-01 | 93.1% | 97.8% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 33.0 | 3.47e-01 | 90.3% | 59.7% |
| 4i4cB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 41.0 | 2.61e-01 | 76.4% | 46.5% |
| 3uqcB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 34.0 | 3.16e-01 | 100.0% | 44.1% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 36.0 | 3.76e-01 | 100.0% | 73.0% |
| 4wovA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 32.0 | 3.04e-01 | 80.6% | 45.2% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 37.0 | 3.82e-01 | 94.4% | 73.1% |
| 4fg9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 32.0 | 3.19e-01 | 86.1% | 51.9% |
| 6k3lB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 31.0 | 2.92e-01 | 86.1% | 42.9% |
| 2w4oA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 31.0 | 3.08e-01 | 87.5% | 51.9% |
| 3nynB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 38.0 | 2.66e-01 | 80.6% | 49.0% |
| 2vgmA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.51 | 41.0 | 3.49e-01 | 100.0% | 52.5% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 41.0 | 2.90e-01 | 91.7% | 91.4% |
| 2o1uB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 42.0 | 3.25e-01 | 91.7% | 72.1% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2966850 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.68 | 39.0 | 2.77e-01 | 98.6% | 19.8% |
| 4928794 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 40.0 | 4.76e-01 | 91.7% | 95.6% |
| 3182122 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.61 | 48.0 | 3.73e-01 | 86.1% | 60.0% |
| 4228333 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 43.0 | 2.51e-01 | 73.6% | 81.7% |
| 4152161 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.60 | 38.0 | 2.54e-01 | 90.3% | 14.9% |
| 4049824 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 39.0 | 3.41e-01 | 100.0% | 42.6% |
| 3486269 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.59 | 37.0 | 2.49e-01 | 88.9% | 15.1% |
| 3902368 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 38.0 | 2.21e-01 | 88.9% | 6.8% |
| 3723379 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.58 | 46.0 | 3.52e-01 | 86.1% | 48.8% |
| 3798333 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 39.0 | 2.51e-01 | 72.2% | 13.3% |
| 3902438 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 39.0 | 3.57e-01 | 94.4% | 49.5% |
| 3905775 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 39.0 | 2.50e-01 | 72.2% | 13.2% |
| 3790068 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 41.0 | 2.63e-01 | 81.9% | 24.2% |
| 4948056 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 36.0 | 3.28e-01 | 91.7% | 48.0% |
| 3598946 | 1129.1.1.0 ↗ | a+b three layers › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit | 0.55 | 38.0 | 3.44e-01 | 100.0% | 52.0% |
| 3256403 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.55 | 38.0 | 2.34e-01 | 72.2% | 56.4% |
| 3523177 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 38.0 | 2.40e-01 | 75.0% | 12.4% |
| 3404582 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 46.0 | 2.94e-01 | 95.8% | 25.1% |
| 3660366 | 2003.1.2.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › HI0933_like | 0.51 | 41.0 | 2.71e-01 | 87.5% | 63.3% |
| 3837820 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.51 | 46.0 | 3.37e-01 | 100.0% | 52.1% |
| 3309265 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.50 | 44.0 | 2.84e-01 | 95.8% | 25.1% |
| 3232680 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.50 | 38.0 | 2.53e-01 | 84.7% | 18.8% |
| 4988664 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 42.0 | 4.23e-01 | 95.8% | 94.7% |
| None | — | 0.50 | 43.0 | 2.60e-01 | 94.4% | 48.9% | |
| 3378720 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.50 | 34.0 | 2.18e-01 | 90.3% | 13.0% |
D2
high
residues 101-195
Domain cluster:
rep: ON287375.1__UQT03322.1__YUBABA_01160__00116__D83-175
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wyqB00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 38.0 | 4.20e-01 | 98.9% | 74.7% |
| 6s5xA01 | 2.60.40.3600 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 40.0 | 4.45e-01 | 74.7% | 93.3% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.57 | 29.0 | 3.86e-01 | 92.6% | 97.8% |
| 3w1yB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 42.0 | 4.13e-01 | 80.0% | 90.4% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.55 | 44.0 | 4.10e-01 | 100.0% | 69.2% |
| 2pbeA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 44.0 | 4.02e-01 | 100.0% | 66.4% |
| 2bh1X00 | 3.30.300.160 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Type II secretion system, protein E, N-terminal domain | 0.54 | 33.0 | 3.79e-01 | 100.0% | 85.3% |
| 3q2wA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 38.0 | 3.75e-01 | 74.7% | 95.2% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 27.0 | 3.01e-01 | 91.6% | 58.1% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 46.0 | 3.35e-01 | 100.0% | 38.9% |
| 4huzA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 39.0 | 3.30e-01 | 81.1% | 79.5% |
| 5i8dA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 38.0 | 3.61e-01 | 76.8% | 91.1% |
| 3oq3B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 44.0 | 4.04e-01 | 98.9% | 92.9% |
| 5eo9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 33.0 | 3.20e-01 | 83.2% | 57.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3017675 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.65 | 37.0 | 4.09e-01 | 78.9% | 70.7% |
| 3961965 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.62 | 34.0 | 3.92e-01 | 91.6% | 75.4% |
| 3954395 | 3097.1.1.0 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y | 0.61 | 33.0 | 4.10e-01 | 91.6% | 89.1% |
| 4588602 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.59 | 31.0 | 4.06e-01 | 91.6% | 96.0% |
| 3971023 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 41.0 | 3.62e-01 | 74.7% | 95.9% |
| 5045944 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.57 | 44.0 | 4.32e-01 | 98.9% | 75.2% |
| 4140206 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 33.0 | 3.51e-01 | 97.9% | 65.9% |
| 3390438 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 44.0 | 4.05e-01 | 85.3% | 97.6% |
| 4023011 | 2003.1.3.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 | 0.55 | 38.0 | 2.91e-01 | 70.5% | 63.2% |
| 4190010 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 44.0 | 3.91e-01 | 100.0% | 60.0% |
| 3290954 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.54 | 38.0 | 3.87e-01 | 92.6% | 72.6% |
| 3584039 | 5.1.5.89 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 | 0.54 | 38.0 | 2.55e-01 | 73.7% | 91.6% |
| 4026205 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.54 | 45.0 | 3.62e-01 | 94.7% | 97.5% |
| 424192 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.51 | 35.0 | 3.00e-01 | 71.6% | 95.1% |
| 4199309 | 7574.1.1.2 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › E1_dh | 0.51 | 42.0 | 2.73e-01 | 91.6% | 27.1% |
| 3940554 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.51 | 45.0 | 3.26e-01 | 100.0% | 46.9% |
| 3239750 | 211.1.1.34 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › FBA_2 | 0.51 | 41.0 | 4.26e-01 | 89.5% | 100.0% |
| 3414497 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.50 | 36.0 | 3.56e-01 | 76.8% | 89.5% |
| 4120640 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 42.0 | 3.45e-01 | 96.8% | 60.5% |