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OM816835.1__WCS67772.1__X__00026

Bact-Vir

OM816835.1__WCS67772.1__X__00026

Identity

Accession:
OM816835 ↗
Kingdom:
phage

Quality

81.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-56
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13986.12 best DUF4224 68.6 5.10e-19 90.0% 100.0%
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q4aA00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.69 62.0 3.74e-01 100.0% 21.8%
3mcwA00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.66 47.0 3.12e-01 76.0% 85.1%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.65 53.0 3.35e-01 100.0% 44.1%
4du5B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.64 48.0 2.96e-01 82.0% 31.2%
1n0uA03 3.90.1430.10 Alpha Beta › Alpha-Beta Complex › Yeast translation eEF2 (G' domain) › Yeast translation eEF2 (G' domain) 0.62 43.0 3.46e-01 76.0% 43.9%
2pjsA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 48.0 3.85e-01 88.0% 45.1%
1e1hB01 1.20.58.540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 46.0 3.73e-01 90.0% 52.4%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.58 46.0 3.77e-01 98.0% 60.2%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 46.0 3.69e-01 100.0% 40.5%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 49.0 3.30e-01 100.0% 24.8%
1epwA01 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.57 43.0 2.59e-01 90.0% 13.0%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.37e-01 100.0% 73.0%
1g4dA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.31e-01 98.0% 75.4%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.56 45.0 3.56e-01 100.0% 40.5%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.56 45.0 3.54e-01 100.0% 39.2%
2napA03 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.56 42.0 2.69e-01 82.0% 69.7%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.76e-01 78.0% 65.1%
1xtfA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.55 41.0 2.49e-01 90.0% 13.1%
2fpqA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.55 42.0 2.53e-01 90.0% 14.0%
2gqfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 46.0 3.00e-01 100.0% 59.0%
2i0zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 45.0 2.93e-01 98.0% 27.3%
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.54 41.0 3.16e-01 84.0% 88.2%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.54 41.0 2.48e-01 90.0% 13.2%
2bonA01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.54 42.0 3.19e-01 88.0% 87.5%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 42.0 3.91e-01 100.0% 95.8%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.79e-01 86.0% 75.0%
3alfA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 39.0 3.61e-01 84.0% 78.6%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.07e-01 100.0% 31.1%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.83e-01 100.0% 61.3%
2hs5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.74e-01 100.0% 64.2%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.97e-01 100.0% 64.4%
4h63F02 6.10.250.2600 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.52 26.0 2.99e-01 74.0% 64.1%
6p2uA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.52 36.0 3.63e-01 76.0% 75.0%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.52 41.0 3.88e-01 100.0% 97.0%
1bc0A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.52 36.0 3.06e-01 74.0% 64.0%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 2.96e-01 100.0% 30.1%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 40.0 3.85e-01 84.0% 80.7%
3pvsA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.52 37.0 3.33e-01 80.0% 86.8%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.15e-01 92.0% 42.6%
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.93e-01 100.0% 72.1%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.51 39.0 3.28e-01 100.0% 45.1%
6swc801 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.51 41.0 3.28e-01 98.0% 45.7%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 42.0 3.80e-01 100.0% 65.3%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.50e-01 100.0% 60.5%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3530366 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 4.82e-01 100.0% 64.0%
3607004 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.64 49.0 4.29e-01 94.0% 56.0%
3930811 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.64 49.0 5.12e-01 94.0% 93.3%
5082561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.63 51.0 5.11e-01 98.0% 96.0%
5070666 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.62 52.0 5.13e-01 100.0% 90.9%
3953197 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.62 51.0 4.28e-01 100.0% 51.6%
3712073 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.61 49.0 4.96e-01 100.0% 90.0%
4527553 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.60 50.0 4.93e-01 100.0% 92.7%
4564454 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.60 49.0 4.04e-01 100.0% 47.6%
3201844 101.1.2.45 alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP 0.60 51.0 4.05e-01 98.0% 49.5%
5047649 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.60 50.0 5.07e-01 100.0% 100.0%
4932995 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.59 49.0 4.96e-01 100.0% 100.0%
5027627 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.59 49.0 4.85e-01 100.0% 90.9%
3871595 109.4.1.143 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ric8 0.59 43.0 2.44e-01 78.0% 13.7%
4959921 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 44.0 3.74e-01 100.0% 48.2%
5064906 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.59 48.0 4.71e-01 100.0% 89.1%
4933561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.58 48.0 4.74e-01 100.0% 89.1%
4001620 109.4.1.143 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ric8 0.58 42.0 2.43e-01 78.0% 20.2%
4947701 101.1.2.882 alpha arrays › HTH › HTH › winged helix domain › FeoA 0.58 44.0 3.55e-01 100.0% 42.0%
3954861 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.58 46.0 4.60e-01 100.0% 92.7%
3941467 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.58 49.0 4.30e-01 100.0% 62.5%
4941453 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.58 46.0 3.77e-01 94.0% 59.6%
139679 101.1.9.21 alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N 0.58 46.0 3.78e-01 98.0% 60.2%
3994831 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.58 39.0 2.48e-01 72.0% 71.6%
3476654 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 39.0 2.30e-01 74.0% 12.8%
4668740 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 45.0 3.78e-01 100.0% 48.6%
4031764 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.56 45.0 3.44e-01 98.0% 36.2%
4149459 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.56 41.0 3.09e-01 88.0% 60.0%
4994568 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.56 44.0 4.37e-01 100.0% 89.1%
5077394 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.56 43.0 3.39e-01 100.0% 38.3%
3289439 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.56 45.0 4.45e-01 100.0% 90.9%
3828246 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.55 41.0 3.26e-01 82.0% 49.1%
1844183 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.55 46.0 3.49e-01 100.0% 38.6%
3387245 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.55 46.0 3.49e-01 100.0% 37.8%
3707832 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 3.75e-01 100.0% 54.0%
4197446 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.55 46.0 3.45e-01 100.0% 37.0%
3948487 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.55 45.0 3.43e-01 100.0% 37.0%
3700991 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 38.0 3.03e-01 74.0% 88.6%
4223228 101.1.9.21 alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N 0.54 45.0 3.82e-01 98.0% 68.9%
4056199 7516.1.1.10 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.54 41.0 2.70e-01 84.0% 44.4%
3484726 101.1.2.416 alpha arrays › HTH › HTH › winged helix domain › WH_Egal 0.54 45.0 3.95e-01 100.0% 70.0%
3621931 109.4.1.143 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ric8 0.54 39.0 2.23e-01 78.0% 12.7%
3487239 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 40.0 3.68e-01 80.0% 69.2%
5065138 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.54 44.0 3.58e-01 100.0% 46.0%
4061721 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.54 43.0 3.38e-01 100.0% 52.3%
171609 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.54 42.0 3.34e-01 100.0% 51.1%
None 0.53 46.0 3.14e-01 98.0% 34.9%
3284986 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.53 43.0 3.36e-01 98.0% 40.0%
3284779 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.53 43.0 3.32e-01 98.0% 38.4%
3954355 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.53 44.0 3.50e-01 98.0% 44.5%
3969986 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 45.0 2.98e-01 100.0% 30.2%
3959369 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.04e-01 82.0% 89.6%
3279459 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.52 41.0 3.26e-01 98.0% 39.0%
3616963 109.4.1.1505 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_FBXO47 0.51 37.0 2.39e-01 76.0% 26.5%
3943344 183.1.1.0 alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain 0.51 42.0 3.15e-01 100.0% 33.6%
4627870 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.51 42.0 3.84e-01 100.0% 68.6%
3975657 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.51 43.0 3.79e-01 100.0% 64.0%
5042174 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.51 41.0 3.15e-01 100.0% 35.6%
4106869 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.50 44.0 3.95e-01 100.0% 72.9%
4395233 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.50 41.0 3.07e-01 98.0% 48.3%