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OM818327.1__UOK18044.1__SEA_SANTHID_50__00050
Bact-VirOM818327.1__UOK18044.1__SEA_SANTHID_50__00050
Identity
- Accession:
- OM818327 ↗
- Kingdom:
- phage
Quality
82.7
mean pLDDT
Taxonomy
TaxID: 2927281
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-93
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b7yD00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 47.0 | 3.98e-01 | 100.0% | 67.0% |
| 1so2A00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.56 | 47.0 | 2.85e-01 | 98.0% | 64.2% |
| 6i3mE01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.54 | 40.0 | 3.04e-01 | 100.0% | 30.7% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 40.0 | 3.29e-01 | 91.8% | 72.5% |
| 3bamA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.52 | 38.0 | 2.63e-01 | 85.7% | 75.7% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 39.0 | 3.57e-01 | 93.9% | 98.8% |
| 2oucA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.51 | 40.0 | 2.97e-01 | 87.8% | 43.2% |
| 3ho6B00 | 3.40.50.11050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain | 0.51 | 38.0 | 2.54e-01 | 87.8% | 25.4% |
| 2f48A01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 42.0 | 2.58e-01 | 91.8% | 77.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3178190 | 109.4.1.182 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS,DCB | 0.61 | 48.0 | 2.70e-01 | 100.0% | 6.9% |
| 3192264 | 7076.1.1.0 ↗ | 0.60 | 52.0 | 4.17e-01 | 100.0% | 65.0% | |
| 3972279 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 50.0 | 3.30e-01 | 98.0% | 22.9% |
| 2675152 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.58 | 46.0 | 3.98e-01 | 98.0% | 92.1% |
| 3469793 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.57 | 49.0 | 3.70e-01 | 98.0% | 41.7% |
| 3225862 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.57 | 43.0 | 3.76e-01 | 85.7% | 96.2% |
| 3879711 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.57 | 45.0 | 3.79e-01 | 98.0% | 87.0% |
| 3905886 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.56 | 45.0 | 3.90e-01 | 100.0% | 97.8% |
| 3408853 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.56 | 44.0 | 3.65e-01 | 100.0% | 98.2% |
| 3924495 | 109.4.1.587 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mon2_C | 0.56 | 47.0 | 2.90e-01 | 100.0% | 15.1% |
| 3597386 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 46.0 | 3.70e-01 | 100.0% | 84.8% |
| 4996951 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 45.0 | 3.77e-01 | 95.9% | 93.3% |
| 3404364 | 109.4.1.1302 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30363 | 0.53 | 45.0 | 3.00e-01 | 100.0% | 29.8% |
| 3522707 | 109.4.1.1608 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_Maestro_2, HEAT_MROH2B_1st | 0.52 | 41.0 | 2.42e-01 | 100.0% | 9.4% |
| 3651050 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.52 | 44.0 | 3.69e-01 | 100.0% | 96.7% |
| 3249904 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.51 | 41.0 | 3.69e-01 | 100.0% | 97.5% |
| 3401318 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 41.0 | 2.86e-01 | 100.0% | 40.5% |
| 3260331 | 145.1.1.2 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › Elongin_A | 0.51 | 35.0 | 2.83e-01 | 71.4% | 67.4% |